RNA–Protein interactions for RNA: ENST00000452111.5

CTNS-204, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

TSL 3

Gene CTNS, Length 617 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-204ENST00000452111 LZTS3O60299 673 aaPredicted RBP18.06■□□□□ 0.48
CTNS-204ENST00000452111 CSF2P04141 144 aa18.06■□□□□ 0.48
CTNS-204ENST00000452111 NME1P15531 152 aaKnown RBP18.06■□□□□ 0.48
CTNS-204ENST00000452111 CKMT2P17540 419 aa18.06■□□□□ 0.48
CTNS-204ENST00000452111 HSPA9P38646 679 aaKnown RBP18.06■□□□□ 0.48
CTNS-204ENST00000452111 MMP13P45452 471 aa18.06■□□□□ 0.48
CTNS-204ENST00000452111 CLDN6P56747 220 aa18.06■□□□□ 0.48
CTNS-204ENST00000452111 LRRC14Q15048 493 aa18.06■□□□□ 0.48
CTNS-204ENST00000452111 PDK2Q15119 407 aa18.06■□□□□ 0.48
CTNS-204ENST00000452111 ANKRD20A8PQ5CZ79 823 aa18.06■□□□□ 0.48
CTNS-204ENST00000452111 MARC1Q5VT66 337 aa18.06■□□□□ 0.48
CTNS-204ENST00000452111 ZNF548Q8NEK5 533 aaPredicted RBP18.06■□□□□ 0.48
CTNS-204ENST00000452111 OR4C6Q8NH72 309 aa18.06■□□□□ 0.48
CTNS-204ENST00000452111 PDCD6IPQ8WUM4 868 aaKnown RBP18.06■□□□□ 0.48
CTNS-204ENST00000452111 ZCCHC14Q8WYQ9 949 aaKnown RBP18.06■□□□□ 0.48
CTNS-204ENST00000452111 MGME1Q9BQP7 344 aa18.06■□□□□ 0.48
CTNS-204ENST00000452111 KLF15Q9UIH9 416 aa18.06■□□□□ 0.48
CTNS-204ENST00000452111 ZMIZ1Q9ULJ6 1067 aa18.06■□□□□ 0.48
CTNS-204ENST00000452111 PCDHGC4Q9Y5F7 938 aa18.06■□□□□ 0.48
CTNS-204ENST00000452111 PCDHGA1Q9Y5H4 931 aa18.06■□□□□ 0.48
CTNS-204ENST00000452111 USP24Q9UPU5 2620 aa18.06■□□□□ 0.48
CTNS-204ENST00000452111 CACNA1BQ00975 2339 aa18.05■□□□□ 0.48
CTNS-204ENST00000452111 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP18.05■□□□□ 0.48
CTNS-204ENST00000452111 TMEM8BA6NDV4 472 aa18.05■□□□□ 0.48
CTNS-204ENST00000452111 NEBLO76041 1014 aa18.05■□□□□ 0.48
CTNS-204ENST00000452111 PCCBP05166 539 aa18.05■□□□□ 0.48
CTNS-204ENST00000452111 JUNDP17535 347 aa18.05■□□□□ 0.48
CTNS-204ENST00000452111 CR2P20023 1033 aa18.05■□□□□ 0.48
CTNS-204ENST00000452111 GARSP41250 739 aaKnown RBP18.05■□□□□ 0.48
CTNS-204ENST00000452111 POLR2LP62875 67 aaKnown RBP18.05■□□□□ 0.48
CTNS-204ENST00000452111 DAB2P98082 770 aa18.05■□□□□ 0.48
CTNS-204ENST00000452111 GALNT2Q10471 571 aa18.05■□□□□ 0.48
CTNS-204ENST00000452111 RALGDSQ12967 914 aa18.05■□□□□ 0.48
CTNS-204ENST00000452111 EIF2B5Q13144 721 aaKnown RBP18.05■□□□□ 0.48
CTNS-204ENST00000452111 ZNF211Q13398 564 aaPredicted RBP18.05■□□□□ 0.48
CTNS-204ENST00000452111 PTK2BQ14289 1009 aa18.05■□□□□ 0.48
CTNS-204ENST00000452111 PAFAH1B3Q15102 231 aaKnown RBP18.05■□□□□ 0.48
CTNS-204ENST00000452111 SMAD1Q15797 465 aaKnown RBP18.05■□□□□ 0.48
CTNS-204ENST00000452111 WSCD2Q2TBF2 565 aa18.05■□□□□ 0.48
CTNS-204ENST00000452111 PROX2Q3B8N5 592 aa18.05■□□□□ 0.48
CTNS-204ENST00000452111 MAP7D3Q8IWC1 876 aa18.05■□□□□ 0.48
CTNS-204ENST00000452111 RHOT2Q8IXI1 618 aa18.05■□□□□ 0.48
CTNS-204ENST00000452111 GALNT15Q8N3T1 639 aa18.05■□□□□ 0.48
CTNS-204ENST00000452111 KDF1Q8NAX2 398 aaPredicted RBP18.05■□□□□ 0.48
CTNS-204ENST00000452111 RFFLQ8WZ73 363 aa18.05■□□□□ 0.48
CTNS-204ENST00000452111 RAPGEF5Q92565 580 aa18.05■□□□□ 0.48
CTNS-204ENST00000452111 NUDCD1Q96RS6 583 aa18.05■□□□□ 0.48
CTNS-204ENST00000452111 NOD2Q9HC29 1040 aa18.05■□□□□ 0.48
CTNS-204ENST00000452111 COL5A1P20908 1838 aaPredicted RBP18.05■□□□□ 0.48
CTNS-204ENST00000452111 NEMP2A6NFY4 417 aa18.04■□□□□ 0.48
CTNS-204ENST00000452111 A8MX80 341 aa18.04■□□□□ 0.48
CTNS-204ENST00000452111 ELFN1P0C7U0 828 aa18.04■□□□□ 0.48
CTNS-204ENST00000452111 GIMD1P0DJR0 217 aa18.04■□□□□ 0.48
CTNS-204ENST00000452111 ALPPL2P10696 532 aa18.04■□□□□ 0.48
CTNS-204ENST00000452111 YPEL5P62699 121 aa18.04■□□□□ 0.48
CTNS-204ENST00000452111 LRRC49Q8IUZ0 686 aa18.04■□□□□ 0.48
CTNS-204ENST00000452111 RBFAQ8N0V3 343 aa18.04■□□□□ 0.48
CTNS-204ENST00000452111 PQLC3Q8N755 202 aa18.04■□□□□ 0.48
CTNS-204ENST00000452111 LMX1AQ8TE12 382 aa18.04■□□□□ 0.48
CTNS-204ENST00000452111 LRRN4Q8WUT4 740 aa18.04■□□□□ 0.48
CTNS-204ENST00000452111 FAF2Q96CS3 445 aa18.04■□□□□ 0.48
CTNS-204ENST00000452111 TCEAL2Q9H3H9 227 aaPredicted RBP18.04■□□□□ 0.48
CTNS-204ENST00000452111 NT5MQ9NPB1 228 aa18.04■□□□□ 0.48
CTNS-204ENST00000452111 NLGN3Q9NZ94 848 aa18.04■□□□□ 0.48
CTNS-204ENST00000452111 LRRD1A4D1F6 860 aa18.03■□□□□ 0.48
CTNS-204ENST00000452111 SCAMP1O15126 338 aa18.03■□□□□ 0.48
CTNS-204ENST00000452111 HTRA2O43464 458 aaPredicted RBP18.03■□□□□ 0.48
CTNS-204ENST00000452111 SOCS5O75159 536 aa18.03■□□□□ 0.48
CTNS-204ENST00000452111 KRT37O76014 449 aa18.03■□□□□ 0.48
CTNS-204ENST00000452111 CPP00450 1065 aa18.03■□□□□ 0.48
CTNS-204ENST00000452111 C1SP09871 688 aa18.03■□□□□ 0.48
CTNS-204ENST00000452111 MYF5P13349 255 aa18.03■□□□□ 0.48
CTNS-204ENST00000452111 GBE1Q04446 702 aa18.03■□□□□ 0.48
CTNS-204ENST00000452111 ITKQ08881 620 aa18.03■□□□□ 0.48
CTNS-204ENST00000452111 TRAF2Q12933 501 aa18.03■□□□□ 0.48
CTNS-204ENST00000452111 LIPIQ6XZB0 460 aa18.03■□□□□ 0.48
CTNS-204ENST00000452111 MACC1Q6ZN28 852 aa18.03■□□□□ 0.48
CTNS-204ENST00000452111 DPPA4Q7L190 304 aa18.03■□□□□ 0.48
CTNS-204ENST00000452111 PHACTR4Q8IZ21 702 aa18.03■□□□□ 0.48
CTNS-204ENST00000452111 TC2NQ8N9U0 490 aa18.03■□□□□ 0.48
CTNS-204ENST00000452111 B4GALT6Q9UBX8 382 aa18.03■□□□□ 0.48
CTNS-204ENST00000452111 APOBEC3BQ9UH17 382 aaKnown RBP18.03■□□□□ 0.48
CTNS-204ENST00000452111 PNMA8BQ9ULN7 279 aaPredicted RBP18.03■□□□□ 0.48
CTNS-204ENST00000452111 TTLL3Q9Y4R7 772 aa18.03■□□□□ 0.48
CTNS-204ENST00000452111 K7ESM1 405 aa18.02■□□□□ 0.48
CTNS-204ENST00000452111 AQP9O43315 295 aa18.02■□□□□ 0.48
CTNS-204ENST00000452111 RECQL5O94762 991 aaPredicted RBP18.02■□□□□ 0.48
CTNS-204ENST00000452111 MTA2O94776 668 aa18.02■□□□□ 0.48
CTNS-204ENST00000452111 TNNT1P13805 278 aa18.02■□□□□ 0.48
CTNS-204ENST00000452111 KDELR1P24390 212 aa18.02■□□□□ 0.48
CTNS-204ENST00000452111 ACP1P24666 158 aa18.02■□□□□ 0.48
CTNS-204ENST00000452111 ARHGAP25P42331 645 aa18.02■□□□□ 0.48
CTNS-204ENST00000452111 INPP5AQ14642 412 aa18.02■□□□□ 0.48
CTNS-204ENST00000452111 TIGD7Q6NT04 549 aaPredicted RBP18.02■□□□□ 0.48
CTNS-204ENST00000452111 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP18.02■□□□□ 0.48
CTNS-204ENST00000452111 TEX26Q8N6G2 289 aa18.02■□□□□ 0.48
CTNS-204ENST00000452111 APOLD1Q96LR9 279 aa18.02■□□□□ 0.48
CTNS-204ENST00000452111 DUSP23Q9BVJ7 150 aa18.02■□□□□ 0.48
CTNS-204ENST00000452111 RBSNQ9H1K0 784 aa18.02■□□□□ 0.48
CTNS-204ENST00000452111 HYOU1Q9Y4L1 999 aa18.02■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms