RNA–Protein interactions for RNA: ENST00000450066.6

USP39-207, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 2 BASIC

Gene USP39, Length 2,086 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-207ENST00000450066 DENND6AQ8IWF6 608 aa14.34□□□□□ -0.11
USP39-207ENST00000450066 LMNTD2Q8IXW0 634 aa14.34□□□□□ -0.11
USP39-207ENST00000450066 DCLK2Q8N568 766 aa14.34□□□□□ -0.11
USP39-207ENST00000450066 C2CD4AQ8NCU7 369 aaPredicted RBP14.34□□□□□ -0.11
USP39-207ENST00000450066 STYXQ8WUJ0 223 aa14.34□□□□□ -0.11
USP39-207ENST00000450066 SPOCK2Q92563 424 aa14.34□□□□□ -0.11
USP39-207ENST00000450066 VPS39Q96JC1 886 aa14.34□□□□□ -0.11
USP39-207ENST00000450066 RPL10LQ96L21 214 aaKnown RBP14.34□□□□□ -0.11
USP39-207ENST00000450066 SLC13A1Q9BZW2 595 aa14.34□□□□□ -0.11
USP39-207ENST00000450066 MFSD1Q9H3U5 465 aa14.34□□□□□ -0.11
USP39-207ENST00000450066 TRPV4Q9HBA0 871 aa14.34□□□□□ -0.11
USP39-207ENST00000450066 PCMTD2Q9NV79 361 aa14.34□□□□□ -0.11
USP39-207ENST00000450066 SLC17A7Q9P2U7 560 aa14.34□□□□□ -0.11
USP39-207ENST00000450066 GGT7Q9UJ14 662 aa14.34□□□□□ -0.11
USP39-207ENST00000450066 SLC25A13Q9UJS0 675 aa14.34□□□□□ -0.11
USP39-207ENST00000450066 FBXO10Q9UK96 956 aa14.34□□□□□ -0.11
USP39-207ENST00000450066 PLLPQ9Y342 182 aa14.34□□□□□ -0.11
USP39-207ENST00000450066 KCTD3Q9Y597 815 aa14.34□□□□□ -0.11
USP39-207ENST00000450066 SPO11Q9Y5K1 396 aa14.34□□□□□ -0.11
USP39-207ENST00000450066 C5orf42Q9H799 3197 aa14.33□□□□□ -0.11
USP39-207ENST00000450066 MYOFQ9NZM1 2061 aa14.33□□□□□ -0.12
USP39-207ENST00000450066 IGSF6O95976 241 aa14.33□□□□□ -0.12
USP39-207ENST00000450066 ADH1CP00326 375 aa14.33□□□□□ -0.12
USP39-207ENST00000450066 PIRTP0C851 137 aa14.33□□□□□ -0.12
USP39-207ENST00000450066 GABRB3P28472 473 aa14.33□□□□□ -0.12
USP39-207ENST00000450066 TYK2P29597 1187 aa14.33□□□□□ -0.12
USP39-207ENST00000450066 SLC1A2P43004 574 aa14.33□□□□□ -0.12
USP39-207ENST00000450066 ETV4P43268 484 aa14.33□□□□□ -0.12
USP39-207ENST00000450066 STK19P49842 368 aaPredicted RBP14.33□□□□□ -0.12
USP39-207ENST00000450066 SERPINB8P50452 374 aa14.33□□□□□ -0.12
USP39-207ENST00000450066 PRAMEP78395 509 aa14.33□□□□□ -0.12
USP39-207ENST00000450066 ECT2LQ008S8 904 aa14.33□□□□□ -0.12
USP39-207ENST00000450066 CTBP1Q13363 440 aa14.33□□□□□ -0.12
USP39-207ENST00000450066 TAF1AQ15573 450 aaPredicted RBP14.33□□□□□ -0.12
USP39-207ENST00000450066 TCEAL5Q5H9L2 206 aa14.33□□□□□ -0.12
USP39-207ENST00000450066 ANKRD54Q6NXT1 300 aa14.33□□□□□ -0.12
USP39-207ENST00000450066 SYCE2Q6PIF2 218 aa14.33□□□□□ -0.12
USP39-207ENST00000450066 CDHR3Q6ZTQ4 885 aa14.33□□□□□ -0.12
USP39-207ENST00000450066 ADIPOR2Q86V24 386 aa14.33□□□□□ -0.12
USP39-207ENST00000450066 AHI1Q8N157 1196 aa14.33□□□□□ -0.12
USP39-207ENST00000450066 OR2AP1Q8NGE2 309 aa14.33□□□□□ -0.12
USP39-207ENST00000450066 BPIFB1Q8TDL5 484 aa14.33□□□□□ -0.12
USP39-207ENST00000450066 PDCD6IPQ8WUM4 868 aaKnown RBP14.33□□□□□ -0.12
USP39-207ENST00000450066 HDAC10Q969S8 669 aa14.33□□□□□ -0.12
USP39-207ENST00000450066 GPR22Q99680 433 aa14.33□□□□□ -0.12
USP39-207ENST00000450066 CEP44Q9C0F1 390 aa14.33□□□□□ -0.12
USP39-207ENST00000450066 OBP2AQ9NY56 170 aa14.33□□□□□ -0.12
USP39-207ENST00000450066 GRID1Q9ULK0 1009 aa14.33□□□□□ -0.12
USP39-207ENST00000450066 MTO1Q9Y2Z2 717 aaKnown RBP14.33□□□□□ -0.12
USP39-207ENST00000450066 SZT2Q5T011 3432 aa14.32□□□□□ -0.12
USP39-207ENST00000450066 C2orf81A6NN90 581 aa14.32□□□□□ -0.12
USP39-207ENST00000450066 TCP11X1B4DZS4 312 aa14.32□□□□□ -0.12
USP39-207ENST00000450066 HOXC11O43248 304 aaPredicted RBP14.32□□□□□ -0.12
USP39-207ENST00000450066 SOCS5O75159 536 aa14.32□□□□□ -0.12
USP39-207ENST00000450066 CYP17A1P05093 508 aa14.32□□□□□ -0.12
USP39-207ENST00000450066 DHRS4L1P0CG22 281 aa14.32□□□□□ -0.12
USP39-207ENST00000450066 DRD4P21917 467 aa14.32□□□□□ -0.12
USP39-207ENST00000450066 PSMA3P25788 255 aa14.32□□□□□ -0.12
USP39-207ENST00000450066 POLD2P49005 469 aa14.32□□□□□ -0.12
USP39-207ENST00000450066 ARSDP51689 593 aa14.32□□□□□ -0.12
USP39-207ENST00000450066 ZNF140P52738 457 aaPredicted RBP14.32□□□□□ -0.12
USP39-207ENST00000450066 RPL26P61254 145 aaKnown RBP14.32□□□□□ -0.12
USP39-207ENST00000450066 SNRPD1P62314 119 aaKnown RBP14.32□□□□□ -0.12
USP39-207ENST00000450066 BCL2L1Q07817 233 aa14.32□□□□□ -0.12
USP39-207ENST00000450066 PDE1CQ14123 709 aaPredicted RBP14.32□□□□□ -0.12
USP39-207ENST00000450066 PDK4Q16654 411 aa14.32□□□□□ -0.12
USP39-207ENST00000450066 QPCTQ16769 361 aa14.32□□□□□ -0.12
USP39-207ENST00000450066 ARMC12Q5T9G4 340 aa14.32□□□□□ -0.12
USP39-207ENST00000450066 RGS9BPQ6ZS82 235 aa14.32□□□□□ -0.12
USP39-207ENST00000450066 GLT6D1Q7Z4J2 308 aa14.32□□□□□ -0.12
USP39-207ENST00000450066 CPLX4Q7Z7G2 160 aa14.32□□□□□ -0.12
USP39-207ENST00000450066 GALNT7Q86SF2 657 aa14.32□□□□□ -0.12
USP39-207ENST00000450066 OR6P1Q8NGX9 317 aa14.32□□□□□ -0.12
USP39-207ENST00000450066 ATXN7L3BQ96GX2 97 aa14.32□□□□□ -0.12
USP39-207ENST00000450066 FAM111AQ96PZ2 611 aa14.32□□□□□ -0.12
USP39-207ENST00000450066 APOL5Q9BWW9 433 aa14.32□□□□□ -0.12
USP39-207ENST00000450066 FAM107BQ9H098 131 aa14.32□□□□□ -0.12
USP39-207ENST00000450066 VPS11Q9H270 941 aa14.32□□□□□ -0.12
USP39-207ENST00000450066 C12orf65Q9H3J6 166 aaKnown RBP14.32□□□□□ -0.12
USP39-207ENST00000450066 ATP13A3Q9H7F0 1226 aa14.32□□□□□ -0.12
USP39-207ENST00000450066 SNX15Q9NRS6 342 aa14.32□□□□□ -0.12
USP39-207ENST00000450066 HACD3Q9P035 362 aa14.32□□□□□ -0.12
USP39-207ENST00000450066 EVLQ9UI08 416 aaPredicted RBP14.32□□□□□ -0.12
USP39-207ENST00000450066 FBXO5Q9UKT4 447 aa14.32□□□□□ -0.12
USP39-207ENST00000450066 RPL26L1Q9UNX3 145 aaKnown RBP14.32□□□□□ -0.12
USP39-207ENST00000450066 PCDHB9Q9Y5E1 797 aa14.32□□□□□ -0.12
USP39-207ENST00000450066 TNRC18O15417 2968 aaPredicted RBP14.32□□□□□ -0.12
USP39-207ENST00000450066 TRAFD1O14545 582 aaPredicted RBP14.32□□□□□ -0.12
USP39-207ENST00000450066 LINC01565O15544 149 aa14.32□□□□□ -0.12
USP39-207ENST00000450066 HTRA2O43464 458 aaPredicted RBP14.32□□□□□ -0.12
USP39-207ENST00000450066 RPP40O75818 363 aaKnown RBP14.32□□□□□ -0.12
USP39-207ENST00000450066 PGLSO95336 258 aa14.32□□□□□ -0.12
USP39-207ENST00000450066 VIMP08670 466 aaKnown RBP14.32□□□□□ -0.12
USP39-207ENST00000450066 F7P08709 466 aaPredicted RBP14.32□□□□□ -0.12
USP39-207ENST00000450066 ADH5P11766 374 aa14.32□□□□□ -0.12
USP39-207ENST00000450066 HOXB8P17481 243 aaPredicted RBP14.32□□□□□ -0.12
USP39-207ENST00000450066 FOXN2P32314 431 aa14.32□□□□□ -0.12
USP39-207ENST00000450066 GRIA4P48058 902 aa14.32□□□□□ -0.12
USP39-207ENST00000450066 GET4Q7L5D6 327 aaPredicted RBP14.32□□□□□ -0.12
USP39-207ENST00000450066 CAMK1DQ8IU85 385 aa14.32□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms