RNA–Protein interactions for RNA: ENST00000448971.5

USP39-206, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 610 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-206ENST00000448971 KIAA1161Q6NSJ0 714 aa14.71□□□□□ -0.05
USP39-206ENST00000448971 NEK5Q6P3R8 708 aa14.71□□□□□ -0.05
USP39-206ENST00000448971 SRLQ86TD4 932 aa14.71□□□□□ -0.05
USP39-206ENST00000448971 HORMAD1Q86X24 394 aa14.71□□□□□ -0.05
USP39-206ENST00000448971 VSIG1Q86XK7 387 aa14.71□□□□□ -0.05
USP39-206ENST00000448971 LRRC49Q8IUZ0 686 aa14.71□□□□□ -0.05
USP39-206ENST00000448971 GALNT15Q8N3T1 639 aa14.71□□□□□ -0.05
USP39-206ENST00000448971 TPCN2Q8NHX9 752 aa14.71□□□□□ -0.05
USP39-206ENST00000448971 KLK6Q92876 244 aa14.71□□□□□ -0.05
USP39-206ENST00000448971 RAB7BQ96AH8 199 aa14.71□□□□□ -0.05
USP39-206ENST00000448971 SKA1Q96BD8 255 aa14.71□□□□□ -0.05
USP39-206ENST00000448971 PSKH2Q96QS6 385 aa14.71□□□□□ -0.05
USP39-206ENST00000448971 CPEB1Q9BZB8 566 aaKnown RBP14.71□□□□□ -0.05
USP39-206ENST00000448971 EBF2Q9HAK2 575 aa14.71□□□□□ -0.05
USP39-206ENST00000448971 DMTF1Q9Y222 760 aa14.71□□□□□ -0.05
USP39-206ENST00000448971 TTLL3Q9Y4R7 772 aa14.71□□□□□ -0.05
USP39-206ENST00000448971 HEY1Q9Y5J3 304 aa14.71□□□□□ -0.05
USP39-206ENST00000448971 FADS3Q9Y5Q0 445 aa14.71□□□□□ -0.05
USP39-206ENST00000448971 MACROD2A1Z1Q3 448 aa14.7□□□□□ -0.06
USP39-206ENST00000448971 FAM149AA5PLN7 773 aa14.7□□□□□ -0.06
USP39-206ENST00000448971 GOLGA8CPA6NN73 597 aa14.7□□□□□ -0.06
USP39-206ENST00000448971 MUSKO15146 869 aa14.7□□□□□ -0.06
USP39-206ENST00000448971 SLC31A1O15431 190 aa14.7□□□□□ -0.06
USP39-206ENST00000448971 AP1G1O43747 822 aa14.7□□□□□ -0.06
USP39-206ENST00000448971 CD38P28907 300 aa14.7□□□□□ -0.06
USP39-206ENST00000448971 CSNK1DP48730 415 aa14.7□□□□□ -0.06
USP39-206ENST00000448971 MAXP61244 160 aa14.7□□□□□ -0.06
USP39-206ENST00000448971 BCL2L1Q07817 233 aa14.7□□□□□ -0.06
USP39-206ENST00000448971 KIF5AQ12840 1032 aa14.7□□□□□ -0.06
USP39-206ENST00000448971 SEL1L3Q68CR1 1132 aa14.7□□□□□ -0.06
USP39-206ENST00000448971 TTC7BQ86TV6 843 aa14.7□□□□□ -0.06
USP39-206ENST00000448971 CAMK1DQ8IU85 385 aa14.7□□□□□ -0.06
USP39-206ENST00000448971 PLD5Q8N7P1 536 aa14.7□□□□□ -0.06
USP39-206ENST00000448971 CCNYQ8ND76 341 aa14.7□□□□□ -0.06
USP39-206ENST00000448971 CALR3Q96L12 384 aaKnown RBP14.7□□□□□ -0.06
USP39-206ENST00000448971 LACRTQ9GZZ8 138 aa14.7□□□□□ -0.06
USP39-206ENST00000448971 SUV39H2Q9H5I1 410 aa14.7□□□□□ -0.06
USP39-206ENST00000448971 FZD3Q9NPG1 666 aa14.7□□□□□ -0.06
USP39-206ENST00000448971 HAUS2Q9NVX0 235 aa14.7□□□□□ -0.06
USP39-206ENST00000448971 DTLQ9NZJ0 730 aa14.7□□□□□ -0.06
USP39-206ENST00000448971 GGT7Q9UJ14 662 aa14.7□□□□□ -0.06
USP39-206ENST00000448971 SALL4Q9UJQ4 1053 aa14.7□□□□□ -0.06
USP39-206ENST00000448971 C3orf70A6NLC5 250 aaPredicted RBP14.69□□□□□ -0.06
USP39-206ENST00000448971 BTNL10A8MVZ5 291 aa14.69□□□□□ -0.06
USP39-206ENST00000448971 PRAMEF26H0Y7S4 382 aa14.69□□□□□ -0.06
USP39-206ENST00000448971 H0Y8X5 98 aa14.69□□□□□ -0.06
USP39-206ENST00000448971 TSPAN6O43657 245 aa14.69□□□□□ -0.06
USP39-206ENST00000448971 PEX11BO96011 259 aa14.69□□□□□ -0.06
USP39-206ENST00000448971 ZFXP17010 805 aaPredicted RBP14.69□□□□□ -0.06
USP39-206ENST00000448971 HNRNPA2B1P22626 353 aaKnown RBP14.69□□□□□ -0.06
USP39-206ENST00000448971 AKT2P31751 481 aa14.69□□□□□ -0.06
USP39-206ENST00000448971 CTSKP43235 329 aa14.69□□□□□ -0.06
USP39-206ENST00000448971 GRK6P43250 576 aa14.69□□□□□ -0.06
USP39-206ENST00000448971 MARCKSL1P49006 195 aa14.69□□□□□ -0.06
USP39-206ENST00000448971 RPS21P63220 83 aaKnown RBP14.69□□□□□ -0.06
USP39-206ENST00000448971 ITKQ08881 620 aa14.69□□□□□ -0.06
USP39-206ENST00000448971 ELP6Q0PNE2 266 aa14.69□□□□□ -0.06
USP39-206ENST00000448971 STAT4Q14765 748 aa14.69□□□□□ -0.06
USP39-206ENST00000448971 KAZNQ674X7 775 aa14.69□□□□□ -0.06
USP39-206ENST00000448971 SLC9A4Q6AI14 798 aa14.69□□□□□ -0.06
USP39-206ENST00000448971 BRAT1Q6PJG6 821 aa14.69□□□□□ -0.06
USP39-206ENST00000448971 MFSD7Q6UXD7 560 aa14.69□□□□□ -0.06
USP39-206ENST00000448971 ZSCAN30Q86W11 494 aa14.69□□□□□ -0.06
USP39-206ENST00000448971 CCDC13Q8IYE1 715 aa14.69□□□□□ -0.06
USP39-206ENST00000448971 KATNAL2Q8IYT4 538 aa14.69□□□□□ -0.06
USP39-206ENST00000448971 CCDC112Q8NEF3 446 aa14.69□□□□□ -0.06
USP39-206ENST00000448971 CXorf40AQ8TE69 158 aa14.69□□□□□ -0.06
USP39-206ENST00000448971 LRRN4Q8WUT4 740 aa14.69□□□□□ -0.06
USP39-206ENST00000448971 VOPP1Q96AW1 172 aa14.69□□□□□ -0.06
USP39-206ENST00000448971 HDAC11Q96DB2 347 aa14.69□□□□□ -0.06
USP39-206ENST00000448971 CRELD1Q96HD1 420 aa14.69□□□□□ -0.06
USP39-206ENST00000448971 RBM41Q96IZ5 413 aaKnown RBP14.69□□□□□ -0.06
USP39-206ENST00000448971 FEM1CQ96JP0 617 aa14.69□□□□□ -0.06
USP39-206ENST00000448971 ZNF641Q96N77 438 aaPredicted RBP14.69□□□□□ -0.06
USP39-206ENST00000448971 MGME1Q9BQP7 344 aa14.69□□□□□ -0.06
USP39-206ENST00000448971 GRPEL1Q9HAV7 217 aa14.69□□□□□ -0.06
USP39-206ENST00000448971 NT5MQ9NPB1 228 aa14.69□□□□□ -0.06
USP39-206ENST00000448971 DKK3Q9UBP4 350 aa14.69□□□□□ -0.06
USP39-206ENST00000448971 ZFR2Q9UPR6 939 aaKnown RBP14.69□□□□□ -0.06
USP39-206ENST00000448971 BOLA1Q9Y3E2 137 aa14.69□□□□□ -0.06
USP39-206ENST00000448971 DUSP10Q9Y6W6 482 aa14.69□□□□□ -0.06
USP39-206ENST00000448971 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP14.68□□□□□ -0.06
USP39-206ENST00000448971 TSPAN11A1L157 253 aa14.68□□□□□ -0.06
USP39-206ENST00000448971 TTC24A2A3L6 582 aaPredicted RBP14.68□□□□□ -0.06
USP39-206ENST00000448971 GOLGA6L3A6NEY3 463 aa14.68□□□□□ -0.06
USP39-206ENST00000448971 C10orf142B7Z368 130 aa14.68□□□□□ -0.06
USP39-206ENST00000448971 PPP1R12AO14974 1030 aaPredicted RBP14.68□□□□□ -0.06
USP39-206ENST00000448971 VILLO15195 856 aa14.68□□□□□ -0.06
USP39-206ENST00000448971 PJA2O43164 708 aa14.68□□□□□ -0.06
USP39-206ENST00000448971 NRDCO43847 1150 aa14.68□□□□□ -0.06
USP39-206ENST00000448971 CTNNA1P35221 906 aaKnown RBP14.68□□□□□ -0.06
USP39-206ENST00000448971 NSUN2Q08J23 767 aaKnown RBP eCLIP14.68□□□□□ -0.06
USP39-206ENST00000448971 TFDP2Q14188 446 aa14.68□□□□□ -0.06
USP39-206ENST00000448971 LLGL1Q15334 1064 aa14.68□□□□□ -0.06
USP39-206ENST00000448971 ZNF284Q2VY69 593 aa14.68□□□□□ -0.06
USP39-206ENST00000448971 TMEM259Q4ZIN3 620 aa14.68□□□□□ -0.06
USP39-206ENST00000448971 ERAP2Q6P179 960 aa14.68□□□□□ -0.06
USP39-206ENST00000448971 SPOCD1Q6ZMY3 1216 aa14.68□□□□□ -0.06
USP39-206ENST00000448971 PGBD5Q8N414 524 aa14.68□□□□□ -0.06
USP39-206ENST00000448971 PDCD6IPQ8WUM4 868 aaKnown RBP14.68□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms