RNA–Protein interactions for RNA: ENST00000447683.2

OTUB1-204, Transcript of OTU deubiquitinase, ubiquitin aldehyde binding 1, humanhuman

TSL 2

Gene OTUB1, Length 2,315 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
OTUB1-204ENST00000447683 TMEM175Q9BSA9 504 aa16.39■□□□□ 0.21
OTUB1-204ENST00000447683 TTLL2Q9BWV7 592 aa16.39■□□□□ 0.21
OTUB1-204ENST00000447683 MFSD1Q9H3U5 465 aa16.39■□□□□ 0.21
OTUB1-204ENST00000447683 CCSER2Q9H7U1 834 aa16.39■□□□□ 0.21
OTUB1-204ENST00000447683 HMX1Q9NP08 348 aaPredicted RBP16.39■□□□□ 0.21
OTUB1-204ENST00000447683 ZDHHC2Q9UIJ5 367 aa16.39■□□□□ 0.21
OTUB1-204ENST00000447683 GALTP07902 379 aa16.39■□□□□ 0.21
OTUB1-204ENST00000447683 TACR2P21452 398 aa16.39■□□□□ 0.21
OTUB1-204ENST00000447683 OR1E1P30953 314 aa16.39■□□□□ 0.21
OTUB1-204ENST00000447683 ACVRL1P37023 503 aa16.39■□□□□ 0.21
OTUB1-204ENST00000447683 BTG3Q14201 252 aaPredicted RBP16.39■□□□□ 0.21
OTUB1-204ENST00000447683 PGM2L1Q6PCE3 622 aa16.39■□□□□ 0.21
OTUB1-204ENST00000447683 ANKS3Q6ZW76 656 aa16.39■□□□□ 0.21
OTUB1-204ENST00000447683 ZNF354CQ86Y25 554 aa16.39■□□□□ 0.21
OTUB1-204ENST00000447683 CILP2Q8IUL8 1156 aa16.39■□□□□ 0.21
OTUB1-204ENST00000447683 LMNTD2Q8IXW0 634 aa16.39■□□□□ 0.21
OTUB1-204ENST00000447683 SPATA6LQ8N4H0 392 aa16.39■□□□□ 0.21
OTUB1-204ENST00000447683 AGR3Q8TD06 166 aa16.39■□□□□ 0.21
OTUB1-204ENST00000447683 NRG4Q8WWG1 115 aa16.39■□□□□ 0.21
OTUB1-204ENST00000447683 CNDP1Q96KN2 507 aa16.39■□□□□ 0.21
OTUB1-204ENST00000447683 SLX1AQ9BQ83 275 aa16.39■□□□□ 0.21
OTUB1-204ENST00000447683 PDFQ9HBH1 243 aa16.39■□□□□ 0.21
OTUB1-204ENST00000447683 ACSS2Q9NR19 701 aa16.39■□□□□ 0.21
OTUB1-204ENST00000447683 TTC24A2A3L6 582 aaPredicted RBP16.38■□□□□ 0.21
OTUB1-204ENST00000447683 SLC38A8A6NNN8 435 aa16.38■□□□□ 0.21
OTUB1-204ENST00000447683 CCNT2O60583 730 aaKnown RBP16.38■□□□□ 0.21
OTUB1-204ENST00000447683 COX4I1P13073 169 aa16.38■□□□□ 0.21
OTUB1-204ENST00000447683 NSUN2Q08J23 767 aaKnown RBP eCLIP16.38■□□□□ 0.21
OTUB1-204ENST00000447683 TECRLQ5HYJ1 363 aa16.38■□□□□ 0.21
OTUB1-204ENST00000447683 TMCO4Q5TGY1 634 aa16.38■□□□□ 0.21
OTUB1-204ENST00000447683 NPAS4Q8IUM7 802 aa16.38■□□□□ 0.21
OTUB1-204ENST00000447683 TXNDC5Q8NBS9 432 aaKnown RBP16.38■□□□□ 0.21
OTUB1-204ENST00000447683 ACTRT2Q8TDY3 377 aa16.38■□□□□ 0.21
OTUB1-204ENST00000447683 GPAMQ9HCL2 828 aa16.38■□□□□ 0.21
OTUB1-204ENST00000447683 LRFN2Q9ULH4 789 aa16.38■□□□□ 0.21
OTUB1-204ENST00000447683 HTTP42858 3142 aa16.38■□□□□ 0.21
OTUB1-204ENST00000447683 LDB2O43679 373 aa16.37■□□□□ 0.21
OTUB1-204ENST00000447683 ATF6P18850 670 aa16.37■□□□□ 0.21
OTUB1-204ENST00000447683 ATP6V1C1P21283 382 aa16.37■□□□□ 0.21
OTUB1-204ENST00000447683 ATP5F1P24539 256 aaPredicted RBP16.37■□□□□ 0.21
OTUB1-204ENST00000447683 TPP2P29144 1249 aaPredicted RBP16.37■□□□□ 0.21
OTUB1-204ENST00000447683 SERPINB5P36952 375 aa16.37■□□□□ 0.21
OTUB1-204ENST00000447683 ACVR1Q04771 509 aa16.37■□□□□ 0.21
OTUB1-204ENST00000447683 TCTN1Q2MV58 587 aa16.37■□□□□ 0.21
OTUB1-204ENST00000447683 LSM12Q3MHD2 195 aaKnown RBP16.37■□□□□ 0.21
OTUB1-204ENST00000447683 LRRC74BQ6ZQY2 392 aa16.37■□□□□ 0.21
OTUB1-204ENST00000447683 FRMD7Q6ZUT3 714 aa16.37■□□□□ 0.21
OTUB1-204ENST00000447683 TMEM173Q86WV6 379 aaPredicted RBP16.37■□□□□ 0.21
OTUB1-204ENST00000447683 FAM126BQ8IXS8 530 aa16.37■□□□□ 0.21
OTUB1-204ENST00000447683 GIPC2Q8TF65 315 aa16.37■□□□□ 0.21
OTUB1-204ENST00000447683 SEPT8Q92599 483 aa16.37■□□□□ 0.21
OTUB1-204ENST00000447683 PEX13Q92968 403 aa16.37■□□□□ 0.21
OTUB1-204ENST00000447683 TSPAN17Q96FV3 270 aa16.37■□□□□ 0.21
OTUB1-204ENST00000447683 ZNF333Q96JL9 665 aa16.37■□□□□ 0.21
OTUB1-204ENST00000447683 FEM1CQ96JP0 617 aa16.37■□□□□ 0.21
OTUB1-204ENST00000447683 NDNQ99608 321 aa16.37■□□□□ 0.21
OTUB1-204ENST00000447683 SEMA3CQ99985 751 aa16.37■□□□□ 0.21
OTUB1-204ENST00000447683 TTPALQ9BTX7 342 aa16.37■□□□□ 0.21
OTUB1-204ENST00000447683 CCDC28BQ9BUN5 200 aa16.37■□□□□ 0.21
OTUB1-204ENST00000447683 POLR1EQ9GZS1 481 aaKnown RBP16.37■□□□□ 0.21
OTUB1-204ENST00000447683 ZNF385DQ9H6B1 395 aa16.37■□□□□ 0.21
OTUB1-204ENST00000447683 WDR55Q9H6Y2 383 aaPredicted RBP16.37■□□□□ 0.21
OTUB1-204ENST00000447683 NT5C1B-RDH14C9J2C7 533 aa16.37■□□□□ 0.21
OTUB1-204ENST00000447683 SLC22A2O15244 555 aa16.37■□□□□ 0.21
OTUB1-204ENST00000447683 HOXA2O43364 376 aa16.37■□□□□ 0.21
OTUB1-204ENST00000447683 WISP3O95389 354 aaPredicted RBP16.37■□□□□ 0.21
OTUB1-204ENST00000447683 EPOP01588 193 aa16.37■□□□□ 0.21
OTUB1-204ENST00000447683 ITGAXP20702 1163 aa16.37■□□□□ 0.21
OTUB1-204ENST00000447683 ETFBP38117 255 aa16.37■□□□□ 0.21
OTUB1-204ENST00000447683 RANBP1P43487 201 aa16.37■□□□□ 0.21
OTUB1-204ENST00000447683 ARSDP51689 593 aa16.37■□□□□ 0.21
OTUB1-204ENST00000447683 KCNQ1P51787 676 aa16.37■□□□□ 0.21
OTUB1-204ENST00000447683 SESN3P58005 492 aa16.37■□□□□ 0.21
OTUB1-204ENST00000447683 PFKPQ01813 784 aa16.37■□□□□ 0.21
OTUB1-204ENST00000447683 CSHL1Q14406 222 aa16.37■□□□□ 0.21
OTUB1-204ENST00000447683 FAM83EQ2M2I3 478 aa16.37■□□□□ 0.21
OTUB1-204ENST00000447683 RALGPS1Q5JS13 557 aa16.37■□□□□ 0.21
OTUB1-204ENST00000447683 C1orf146Q5VVC0 180 aa16.37■□□□□ 0.21
OTUB1-204ENST00000447683 ALG1LQ6GMV1 187 aa16.37■□□□□ 0.21
OTUB1-204ENST00000447683 TAS1R1Q7RTX1 841 aa16.37■□□□□ 0.21
OTUB1-204ENST00000447683 PIWIL4Q7Z3Z4 852 aaKnown RBP16.37■□□□□ 0.21
OTUB1-204ENST00000447683 CPSF7Q8N684 471 aaKnown RBP16.37■□□□□ 0.21
OTUB1-204ENST00000447683 KDM1BQ8NB78 822 aa16.37■□□□□ 0.21
OTUB1-204ENST00000447683 DTX3LQ8TDB6 740 aa16.37■□□□□ 0.21
OTUB1-204ENST00000447683 DNAJC9Q8WXX5 260 aa16.37■□□□□ 0.21
OTUB1-204ENST00000447683 HDAC10Q969S8 669 aa16.37■□□□□ 0.21
OTUB1-204ENST00000447683 UBXN10Q96LJ8 280 aa16.37■□□□□ 0.21
OTUB1-204ENST00000447683 ZNF599Q96NL3 588 aa16.37■□□□□ 0.21
OTUB1-204ENST00000447683 RTKNQ9BST9 563 aa16.37■□□□□ 0.21
OTUB1-204ENST00000447683 MRPL9Q9BYD2 267 aaKnown RBP16.37■□□□□ 0.21
OTUB1-204ENST00000447683 SEZ6LQ9BYH1 1024 aa16.37■□□□□ 0.21
OTUB1-204ENST00000447683 RETREG1Q9H6L5 497 aa16.37■□□□□ 0.21
OTUB1-204ENST00000447683 NMRK1Q9NWW6 199 aa16.37■□□□□ 0.21
OTUB1-204ENST00000447683 SCN5AQ14524 2016 aa16.37■□□□□ 0.21
OTUB1-204ENST00000447683 F5H5T6 163 aa16.36■□□□□ 0.21
OTUB1-204ENST00000447683 MUSKO15146 869 aa16.36■□□□□ 0.21
OTUB1-204ENST00000447683 NVLO15381 856 aaKnown RBP16.36■□□□□ 0.21
OTUB1-204ENST00000447683 S1PR4O95977 384 aa16.36■□□□□ 0.21
OTUB1-204ENST00000447683 GNRH1P01148 92 aa16.36■□□□□ 0.21
OTUB1-204ENST00000447683 LTA4HP09960 611 aaKnown RBP16.36■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms