RNA–Protein interactions for RNA: ENST00000445889.5

ERCC3-203, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 2

Gene ERCC3, Length 2,920 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-203ENST00000445889 DHFR2Q86XF0 187 aa14.3□□□□□ -0.12
ERCC3-203ENST00000445889 KLHL23Q8NBE8 558 aa14.3□□□□□ -0.12
ERCC3-203ENST00000445889 OR6P1Q8NGX9 317 aa14.3□□□□□ -0.12
ERCC3-203ENST00000445889 RDH11Q8TC12 318 aa14.3□□□□□ -0.12
ERCC3-203ENST00000445889 CYGBQ8WWM9 190 aa14.3□□□□□ -0.12
ERCC3-203ENST00000445889 LPPQ93052 612 aa14.3□□□□□ -0.12
ERCC3-203ENST00000445889 MAELQ96JY0 434 aaKnown RBP14.3□□□□□ -0.12
ERCC3-203ENST00000445889 FAM210AQ96ND0 272 aa14.3□□□□□ -0.12
ERCC3-203ENST00000445889 RBM22Q9NW64 420 aaKnown RBP eCLIP14.3□□□□□ -0.12
ERCC3-203ENST00000445889 CDKN2AIPQ9NXV6 580 aaPredicted RBP14.3□□□□□ -0.12
ERCC3-203ENST00000445889 TRHDEQ9UKU6 1024 aa14.3□□□□□ -0.12
ERCC3-203ENST00000445889 TRAF6Q9Y4K3 522 aa14.3□□□□□ -0.12
ERCC3-203ENST00000445889 KCTD3Q9Y597 815 aa14.3□□□□□ -0.12
ERCC3-203ENST00000445889 NRCAMQ92823 1304 aa14.3□□□□□ -0.12
ERCC3-203ENST00000445889 RNF103-CHMP3A0A140T963 221 aa14.3□□□□□ -0.12
ERCC3-203ENST00000445889 ZSCAN9O15535 394 aaPredicted RBP14.3□□□□□ -0.12
ERCC3-203ENST00000445889 CD4P01730 458 aa14.3□□□□□ -0.12
ERCC3-203ENST00000445889 ALDOCP09972 364 aaKnown RBP14.3□□□□□ -0.12
ERCC3-203ENST00000445889 MTHFD1P11586 935 aaKnown RBP14.3□□□□□ -0.12
ERCC3-203ENST00000445889 NCK1P16333 377 aa14.3□□□□□ -0.12
ERCC3-203ENST00000445889 OXTRP30559 389 aa14.3□□□□□ -0.12
ERCC3-203ENST00000445889 CASP2P42575 452 aa14.3□□□□□ -0.12
ERCC3-203ENST00000445889 PSMD7P51665 324 aa14.3□□□□□ -0.12
ERCC3-203ENST00000445889 ECT2LQ008S8 904 aa14.3□□□□□ -0.12
ERCC3-203ENST00000445889 CACNB2Q08289 660 aaPredicted RBP14.3□□□□□ -0.12
ERCC3-203ENST00000445889 ARL13BQ3SXY8 428 aa14.3□□□□□ -0.12
ERCC3-203ENST00000445889 FUT11Q495W5 492 aa14.3□□□□□ -0.12
ERCC3-203ENST00000445889 ACBD5Q5T8D3 534 aaPredicted RBP14.3□□□□□ -0.12
ERCC3-203ENST00000445889 BORAQ6PGQ7 559 aa14.3□□□□□ -0.12
ERCC3-203ENST00000445889 EMID1Q96A84 441 aaPredicted RBP14.3□□□□□ -0.12
ERCC3-203ENST00000445889 MRPL57Q9BQC6 102 aaKnown RBP14.3□□□□□ -0.12
ERCC3-203ENST00000445889 PNPLA3Q9NST1 481 aa14.3□□□□□ -0.12
ERCC3-203ENST00000445889 SMOXQ9NWM0 555 aa14.3□□□□□ -0.12
ERCC3-203ENST00000445889 GDAP2Q9NXN4 497 aa14.3□□□□□ -0.12
ERCC3-203ENST00000445889 GJB3O75712 270 aa14.29□□□□□ -0.12
ERCC3-203ENST00000445889 IPO13O94829 963 aaKnown RBP14.29□□□□□ -0.12
ERCC3-203ENST00000445889 HLA-DQB2P05538 268 aa14.29□□□□□ -0.12
ERCC3-203ENST00000445889 SCNN1AP37088 669 aa14.29□□□□□ -0.12
ERCC3-203ENST00000445889 PLCL1Q15111 1095 aa14.29□□□□□ -0.12
ERCC3-203ENST00000445889 TWF2Q6IBS0 349 aaKnown RBP14.29□□□□□ -0.12
ERCC3-203ENST00000445889 TMEM207Q6UWW9 146 aa14.29□□□□□ -0.12
ERCC3-203ENST00000445889 ZNF560Q96MR9 790 aa14.29□□□□□ -0.12
ERCC3-203ENST00000445889 SLC39A8Q9C0K1 460 aa14.29□□□□□ -0.12
ERCC3-203ENST00000445889 NAA50Q9GZZ1 169 aaKnown RBP14.29□□□□□ -0.12
ERCC3-203ENST00000445889 SUCOQ9UBS9 1254 aaKnown RBP14.29□□□□□ -0.12
ERCC3-203ENST00000445889 BTRCQ9Y297 605 aa14.29□□□□□ -0.12
ERCC3-203ENST00000445889 IPPQ9Y573 584 aa14.29□□□□□ -0.12
ERCC3-203ENST00000445889 ASB14A6NK59 587 aa14.29□□□□□ -0.12
ERCC3-203ENST00000445889 SLC22A2O15244 555 aa14.29□□□□□ -0.12
ERCC3-203ENST00000445889 ATP6V1G1O75348 118 aa14.29□□□□□ -0.12
ERCC3-203ENST00000445889 SNAI1O95863 264 aaPredicted RBP14.29□□□□□ -0.12
ERCC3-203ENST00000445889 CAPNS1P04632 268 aa14.29□□□□□ -0.12
ERCC3-203ENST00000445889 C8BP07358 591 aa14.29□□□□□ -0.12
ERCC3-203ENST00000445889 DARSP14868 501 aaKnown RBP14.29□□□□□ -0.12
ERCC3-203ENST00000445889 BDNFP23560 247 aa14.29□□□□□ -0.12
ERCC3-203ENST00000445889 ADSLP30566 484 aaPredicted RBP14.29□□□□□ -0.12
ERCC3-203ENST00000445889 GRB7Q14451 532 aa14.29□□□□□ -0.12
ERCC3-203ENST00000445889 ADRM1Q16186 407 aa14.29□□□□□ -0.12
ERCC3-203ENST00000445889 SV2CQ496J9 727 aa14.29□□□□□ -0.12
ERCC3-203ENST00000445889 TBCELQ5QJ74 424 aa14.29□□□□□ -0.12
ERCC3-203ENST00000445889 TTC33Q6PID6 262 aaPredicted RBP14.29□□□□□ -0.12
ERCC3-203ENST00000445889 SCIMPQ6UWF3 145 aa14.29□□□□□ -0.12
ERCC3-203ENST00000445889 PIWIL4Q7Z3Z4 852 aaKnown RBP14.29□□□□□ -0.12
ERCC3-203ENST00000445889 ANKRD23Q86SG2 305 aa14.29□□□□□ -0.12
ERCC3-203ENST00000445889 ATPAF2Q8N5M1 289 aa14.29□□□□□ -0.12
ERCC3-203ENST00000445889 NAT16Q8N8M0 369 aa14.29□□□□□ -0.12
ERCC3-203ENST00000445889 PPHLN1Q8NEY8 458 aaKnown RBP14.29□□□□□ -0.12
ERCC3-203ENST00000445889 OR6J1Q8NGC5 347 aa14.29□□□□□ -0.12
ERCC3-203ENST00000445889 ERLEC1Q96DZ1 483 aa14.29□□□□□ -0.12
ERCC3-203ENST00000445889 SENP8Q96LD8 212 aa14.29□□□□□ -0.12
ERCC3-203ENST00000445889 NSUN5Q96P11 429 aaKnown RBP14.29□□□□□ -0.12
ERCC3-203ENST00000445889 KLHL5Q96PQ7 755 aa14.29□□□□□ -0.12
ERCC3-203ENST00000445889 CLK4Q9HAZ1 481 aaKnown RBP14.29□□□□□ -0.12
ERCC3-203ENST00000445889 CAMSAP3Q9P1Y5 1249 aaPredicted RBP14.29□□□□□ -0.12
ERCC3-203ENST00000445889 CIDEBQ9UHD4 219 aa14.29□□□□□ -0.12
ERCC3-203ENST00000445889 USP22Q9UPT9 525 aa14.29□□□□□ -0.12
ERCC3-203ENST00000445889 A0A1B0GTL3 188 aa14.28□□□□□ -0.12
ERCC3-203ENST00000445889 CASTOR2A6NHX0 329 aa14.28□□□□□ -0.12
ERCC3-203ENST00000445889 BOLA2-SMG1P6H3BVE0 249 aa14.28□□□□□ -0.12
ERCC3-203ENST00000445889 TREHO43280 583 aa14.28□□□□□ -0.12
ERCC3-203ENST00000445889 STAMBPO95630 424 aa14.28□□□□□ -0.12
ERCC3-203ENST00000445889 ALDH3B2P48448 385 aa14.28□□□□□ -0.12
ERCC3-203ENST00000445889 PLA2G4EQ3MJ16 856 aa14.28□□□□□ -0.12
ERCC3-203ENST00000445889 NHSL2Q5HYW2 709 aa14.28□□□□□ -0.12
ERCC3-203ENST00000445889 C3orf58Q8NDZ4 430 aa14.28□□□□□ -0.12
ERCC3-203ENST00000445889 SHCBP1Q8NEM2 672 aa14.28□□□□□ -0.12
ERCC3-203ENST00000445889 DNAJB14Q8TBM8 379 aa14.28□□□□□ -0.12
ERCC3-203ENST00000445889 GMEB1Q9Y692 573 aa14.28□□□□□ -0.12
ERCC3-203ENST00000445889 ERI2A8K979 691 aaKnown RBP14.28□□□□□ -0.12
ERCC3-203ENST00000445889 NME4O00746 187 aa14.28□□□□□ -0.12
ERCC3-203ENST00000445889 PTGESO14684 152 aa14.28□□□□□ -0.12
ERCC3-203ENST00000445889 B4GAT1O43505 415 aa14.28□□□□□ -0.12
ERCC3-203ENST00000445889 SRP72O76094 671 aaKnown RBP14.28□□□□□ -0.12
ERCC3-203ENST00000445889 MMP3P08254 477 aa14.28□□□□□ -0.12
ERCC3-203ENST00000445889 PIRTP0C851 137 aa14.28□□□□□ -0.12
ERCC3-203ENST00000445889 TPP2P29144 1249 aaPredicted RBP14.28□□□□□ -0.12
ERCC3-203ENST00000445889 SLC7A1P30825 629 aa14.28□□□□□ -0.12
ERCC3-203ENST00000445889 TECRLQ5HYJ1 363 aa14.28□□□□□ -0.12
ERCC3-203ENST00000445889 HABP4Q5JVS0 413 aaKnown RBP14.28□□□□□ -0.12
ERCC3-203ENST00000445889 GPR107Q5VW38 600 aa14.28□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms