RNA–Protein interactions for RNA: ENST00000445503.5

MSH6-204, Transcript of mutS homolog 6, human

TSL 1 (best)

Gene MSH6, Length 4,158 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MSH6-204	ENST00000445503		A0A0J9YYE9	177 aa		11.94	□□□□□ -0.5
MSH6-204	ENST00000445503	MEIS3P2	A8K0S8	358 aa		11.94	□□□□□ -0.5
MSH6-204	ENST00000445503		E5RI56	91 aa		11.94	□□□□□ -0.5
MSH6-204	ENST00000445503	GLP2R	O95838	553 aa		11.94	□□□□□ -0.5
MSH6-204	ENST00000445503	PCNA	P12004	261 aa		11.94	□□□□□ -0.5
MSH6-204	ENST00000445503	CES1	P23141	567 aa		11.94	□□□□□ -0.5
MSH6-204	ENST00000445503	GLDC	P23378	1020 aa		11.94	□□□□□ -0.5
MSH6-204	ENST00000445503	MGAT5B	Q3V5L5	792 aa		11.94	□□□□□ -0.5
MSH6-204	ENST00000445503	GPR107	Q5VW38	600 aa		11.94	□□□□□ -0.5
MSH6-204	ENST00000445503	C1orf50	Q9BV19	199 aa		11.94	□□□□□ -0.5
MSH6-204	ENST00000445503	OSBPL11	Q9BXB4	747 aa		11.94	□□□□□ -0.5
MSH6-204	ENST00000445503	CD274	Q9NZQ7	290 aa		11.94	□□□□□ -0.5
MSH6-204	ENST00000445503	BCAS2	O75934	225 aa	Predicted RBP	11.93	□□□□□ -0.5
MSH6-204	ENST00000445503	SPATA31D3	P0C874	917 aa		11.93	□□□□□ -0.5
MSH6-204	ENST00000445503	ODC1	P11926	461 aa		11.93	□□□□□ -0.5
MSH6-204	ENST00000445503	IGFBP6	P24592	240 aa	Predicted RBP	11.93	□□□□□ -0.5
MSH6-204	ENST00000445503	RPL10	P27635	214 aa	Known RBP	11.93	□□□□□ -0.5
MSH6-204	ENST00000445503	PSEN2	P49810	448 aa		11.93	□□□□□ -0.5
MSH6-204	ENST00000445503	POU4F1	Q01851	419 aa		11.93	□□□□□ -0.5
MSH6-204	ENST00000445503	DPYS	Q14117	519 aa		11.93	□□□□□ -0.5
MSH6-204	ENST00000445503	HECTD2	Q5U5R9	776 aa		11.93	□□□□□ -0.5
MSH6-204	ENST00000445503	FAM219B	Q5XKK7	198 aa		11.93	□□□□□ -0.5
MSH6-204	ENST00000445503	SPATA31D4	Q6ZUB0	917 aa		11.93	□□□□□ -0.5
MSH6-204	ENST00000445503	PIM3	Q86V86	326 aa		11.93	□□□□□ -0.5
MSH6-204	ENST00000445503	SLC22A9	Q8IVM8	553 aa		11.93	□□□□□ -0.5
MSH6-204	ENST00000445503	MIER2	Q8N344	545 aa		11.93	□□□□□ -0.5
MSH6-204	ENST00000445503	ESAM	Q96AP7	390 aa		11.93	□□□□□ -0.5
MSH6-204	ENST00000445503	OCEL1	Q9H607	264 aa		11.93	□□□□□ -0.5
MSH6-204	ENST00000445503	CRTAC1	Q9NQ79	661 aa		11.93	□□□□□ -0.5
MSH6-204	ENST00000445503	ZNF831	Q5JPB2	1677 aa		11.93	□□□□□ -0.5
MSH6-204	ENST00000445503	DHRS12	A0PJE2	317 aa		11.93	□□□□□ -0.5
MSH6-204	ENST00000445503		H3BNX3	289 aa		11.93	□□□□□ -0.5
MSH6-204	ENST00000445503	SDHD	O14521	159 aa		11.93	□□□□□ -0.5
MSH6-204	ENST00000445503	FOXD2	O60548	495 aa	Predicted RBP	11.93	□□□□□ -0.5
MSH6-204	ENST00000445503	ZNF189	O75820	626 aa	Predicted RBP	11.93	□□□□□ -0.5
MSH6-204	ENST00000445503	ALB	P02768	609 aa		11.93	□□□□□ -0.5
MSH6-204	ENST00000445503	ASL	P04424	464 aa		11.93	□□□□□ -0.5
MSH6-204	ENST00000445503	NCK1	P16333	377 aa		11.93	□□□□□ -0.5
MSH6-204	ENST00000445503	CHRM3	P20309	590 aa		11.93	□□□□□ -0.5
MSH6-204	ENST00000445503	DUSP28	Q4G0W2	176 aa		11.93	□□□□□ -0.5
MSH6-204	ENST00000445503	OVOS1	Q6IE37	1185 aa		11.93	□□□□□ -0.5
MSH6-204	ENST00000445503	TIGD7	Q6NT04	549 aa	Predicted RBP	11.93	□□□□□ -0.5
MSH6-204	ENST00000445503	POTEH	Q6S545	545 aa		11.93	□□□□□ -0.5
MSH6-204	ENST00000445503	FRA10AC1	Q70Z53	315 aa		11.93	□□□□□ -0.5
MSH6-204	ENST00000445503	BBS5	Q8N3I7	341 aa		11.93	□□□□□ -0.5
MSH6-204	ENST00000445503	TMIGD2	Q96BF3	282 aa		11.93	□□□□□ -0.5
MSH6-204	ENST00000445503	PRDM16	Q9HAZ2	1276 aa		11.93	□□□□□ -0.5
MSH6-204	ENST00000445503	TBC1D13	Q9NVG8	400 aa		11.93	□□□□□ -0.5
MSH6-204	ENST00000445503	PIR	O00625	290 aa		11.93	□□□□□ -0.5
MSH6-204	ENST00000445503	CNMD	O75829	334 aa		11.93	□□□□□ -0.5
MSH6-204	ENST00000445503	STAU1	O95793	577 aa	Known RBP	11.93	□□□□□ -0.5
MSH6-204	ENST00000445503	FMO4	P31512	558 aa		11.93	□□□□□ -0.5
MSH6-204	ENST00000445503	DSC2	Q02487	901 aa		11.93	□□□□□ -0.5
MSH6-204	ENST00000445503	PIGG	Q5H8A4	983 aa		11.93	□□□□□ -0.5
MSH6-204	ENST00000445503	PLEKHH3	Q7Z736	793 aa		11.93	□□□□□ -0.5
MSH6-204	ENST00000445503	RNF168	Q8IYW5	571 aa	Predicted RBP	11.93	□□□□□ -0.5
MSH6-204	ENST00000445503	LILRA2	Q8N149	483 aa		11.93	□□□□□ -0.5
MSH6-204	ENST00000445503	NLGN2	Q8NFZ4	835 aa		11.93	□□□□□ -0.5
MSH6-204	ENST00000445503	TMEM40	Q8WWA1	233 aa		11.93	□□□□□ -0.5
MSH6-204	ENST00000445503	TBATA	Q96M53	351 aa		11.93	□□□□□ -0.5
MSH6-204	ENST00000445503	HBEGF	Q99075	208 aa		11.93	□□□□□ -0.5
MSH6-204	ENST00000445503	KCTD14	Q9BQ13	255 aa	Predicted RBP	11.93	□□□□□ -0.5
MSH6-204	ENST00000445503	POLR1B	Q9H9Y6	1135 aa		11.93	□□□□□ -0.5
MSH6-204	ENST00000445503	MTF2	Q9Y483	593 aa	Predicted RBP	11.93	□□□□□ -0.5
MSH6-204	ENST00000445503	PTGDR2	Q9Y5Y4	395 aa		11.93	□□□□□ -0.5
MSH6-204	ENST00000445503		A8MT66	165 aa		11.93	□□□□□ -0.5
MSH6-204	ENST00000445503	RENBP	P51606	427 aa		11.93	□□□□□ -0.5
MSH6-204	ENST00000445503	PPIL2	Q13356	520 aa		11.93	□□□□□ -0.5
MSH6-204	ENST00000445503	ITGA7	Q13683	1181 aa		11.93	□□□□□ -0.5
MSH6-204	ENST00000445503	MRNIP	Q6NTE8	343 aa		11.93	□□□□□ -0.5
MSH6-204	ENST00000445503	TAPT1	Q6NXT6	567 aa		11.93	□□□□□ -0.5
MSH6-204	ENST00000445503	DCLRE1A	Q6PJP8	1040 aa		11.93	□□□□□ -0.5
MSH6-204	ENST00000445503	DNAJC14	Q6Y2X3	702 aa	Predicted RBP	11.93	□□□□□ -0.5
MSH6-204	ENST00000445503	PRKD2	Q9BZL6	878 aa		11.93	□□□□□ -0.5
MSH6-204	ENST00000445503	PNPLA3	Q9NST1	481 aa		11.93	□□□□□ -0.5
MSH6-204	ENST00000445503	GMPR2	Q9P2T1	348 aa	Known RBP	11.93	□□□□□ -0.5
MSH6-204	ENST00000445503	UXT	Q9UBK9	157 aa	Predicted RBP	11.93	□□□□□ -0.5
MSH6-204	ENST00000445503	ZNF487	B1APH4	448 aa		11.92	□□□□□ -0.5
MSH6-204	ENST00000445503	BNIP3L	O60238	219 aa		11.92	□□□□□ -0.5
MSH6-204	ENST00000445503	PRKCG	P05129	697 aa		11.92	□□□□□ -0.5
MSH6-204	ENST00000445503	HLA-DQB2	P05538	268 aa		11.92	□□□□□ -0.5
MSH6-204	ENST00000445503	SLC2A3	P11169	496 aa		11.92	□□□□□ -0.5
MSH6-204	ENST00000445503	ATP1A4	Q13733	1029 aa		11.92	□□□□□ -0.5
MSH6-204	ENST00000445503	HNRNPD	Q14103	355 aa	Known RBP	11.92	□□□□□ -0.5
MSH6-204	ENST00000445503	PTPRCAP	Q14761	206 aa		11.92	□□□□□ -0.5
MSH6-204	ENST00000445503	ZNF789	Q5FWF6	425 aa		11.92	□□□□□ -0.5
MSH6-204	ENST00000445503	C10orf120	Q5SQS8	335 aa		11.92	□□□□□ -0.5
MSH6-204	ENST00000445503	AHI1	Q8N157	1196 aa		11.92	□□□□□ -0.5
MSH6-204	ENST00000445503	CDC26	Q8NHZ8	85 aa		11.92	□□□□□ -0.5
MSH6-204	ENST00000445503	C19orf60	Q96EN9	201 aa		11.92	□□□□□ -0.5
MSH6-204	ENST00000445503	TDRKH	Q9Y2W6	561 aa	Known RBP	11.92	□□□□□ -0.5
MSH6-204	ENST00000445503	LRRC37A	A6NMS7	1700 aa		11.92	□□□□□ -0.5
MSH6-204	ENST00000445503		A0A087WXM4	84 aa		11.92	□□□□□ -0.5
MSH6-204	ENST00000445503	PABPN1L	A6NDY0	278 aa	Known RBP	11.92	□□□□□ -0.5
MSH6-204	ENST00000445503	TFAP2A	P05549	437 aa		11.92	□□□□□ -0.5
MSH6-204	ENST00000445503	COL6A2	P12110	1019 aa		11.92	□□□□□ -0.5
MSH6-204	ENST00000445503	MYBPC1	Q00872	1141 aa		11.92	□□□□□ -0.5
MSH6-204	ENST00000445503	GALNT3	Q14435	633 aa		11.92	□□□□□ -0.5
MSH6-204	ENST00000445503	CAMK1D	Q8IU85	385 aa		11.92	□□□□□ -0.5
MSH6-204	ENST00000445503	CENPL	Q8N0S6	344 aa	Predicted RBP	11.92	□□□□□ -0.5

Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms