RNA–Protein interactions for RNA: ENST00000444621.1

HLA-F-221, Transcript of major histocompatibility complex, class I, F, humanhuman

Gene HLA-F, Length 495 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-F-221ENST00000444621 INSIG1O15503 277 aa11.18□□□□□ -0.62
HLA-F-221ENST00000444621 TNFSF14O43557 240 aa11.18□□□□□ -0.62
HLA-F-221ENST00000444621 SPOPO43791 374 aa11.18□□□□□ -0.62
HLA-F-221ENST00000444621 MMP20O60882 483 aa11.18□□□□□ -0.62
HLA-F-221ENST00000444621 DKK1O94907 266 aa11.18□□□□□ -0.62
HLA-F-221ENST00000444621 PIGNO95427 931 aa11.18□□□□□ -0.62
HLA-F-221ENST00000444621 LDOC1O95751 146 aaPredicted RBP11.18□□□□□ -0.62
HLA-F-221ENST00000444621 ALPPL2P10696 532 aa11.18□□□□□ -0.62
HLA-F-221ENST00000444621 TCF4P15884 667 aa11.18□□□□□ -0.62
HLA-F-221ENST00000444621 TIMP2P16035 220 aa11.18□□□□□ -0.62
HLA-F-221ENST00000444621 CA4P22748 312 aa11.18□□□□□ -0.62
HLA-F-221ENST00000444621 KDELR1P24390 212 aa11.18□□□□□ -0.62
HLA-F-221ENST00000444621 ITPKBP27987 946 aa11.18□□□□□ -0.62
HLA-F-221ENST00000444621 MMP13P45452 471 aa11.18□□□□□ -0.62
HLA-F-221ENST00000444621 RXRGP48443 463 aa11.18□□□□□ -0.62
HLA-F-221ENST00000444621 ZNF75DP51815 510 aa11.18□□□□□ -0.62
HLA-F-221ENST00000444621 THOP1P52888 689 aa11.18□□□□□ -0.62
HLA-F-221ENST00000444621 YPEL5P62699 121 aa11.18□□□□□ -0.62
HLA-F-221ENST00000444621 DPYSL3Q14195 570 aa11.18□□□□□ -0.62
HLA-F-221ENST00000444621 UGP2Q16851 508 aa11.18□□□□□ -0.62
HLA-F-221ENST00000444621 TMEM52BQ4KMG9 183 aa11.18□□□□□ -0.62
HLA-F-221ENST00000444621 TMEM259Q4ZIN3 620 aa11.18□□□□□ -0.62
HLA-F-221ENST00000444621 PRAMEF14Q5SWL7 426 aa11.18□□□□□ -0.62
HLA-F-221ENST00000444621 Q6ZSR6 202 aa11.18□□□□□ -0.62
HLA-F-221ENST00000444621 BZW1Q7L1Q6 419 aaKnown RBP11.18□□□□□ -0.62
HLA-F-221ENST00000444621 CAMK1DQ8IU85 385 aa11.18□□□□□ -0.62
HLA-F-221ENST00000444621 TMTC1Q8IUR5 882 aa11.18□□□□□ -0.62
HLA-F-221ENST00000444621 RHOT1Q8IXI2 618 aa11.18□□□□□ -0.62
HLA-F-221ENST00000444621 GALNT15Q8N3T1 639 aa11.18□□□□□ -0.62
HLA-F-221ENST00000444621 ZNF843Q8N446 348 aa11.18□□□□□ -0.62
HLA-F-221ENST00000444621 NPWQ8N729 165 aa11.18□□□□□ -0.62
HLA-F-221ENST00000444621 TMEM145Q8NBT3 493 aa11.18□□□□□ -0.62
HLA-F-221ENST00000444621 NETO2Q8NC67 525 aa11.18□□□□□ -0.62
HLA-F-221ENST00000444621 TSEN2Q8NCE0 465 aaKnown RBP11.18□□□□□ -0.62
HLA-F-221ENST00000444621 CCNYQ8ND76 341 aa11.18□□□□□ -0.62
HLA-F-221ENST00000444621 ATL2Q8NHH9 583 aa11.18□□□□□ -0.62
HLA-F-221ENST00000444621 BAHD1Q8TBE0 780 aaPredicted RBP11.18□□□□□ -0.62
HLA-F-221ENST00000444621 FAM71BQ8TC56 605 aa11.18□□□□□ -0.62
HLA-F-221ENST00000444621 IFT43Q96FT9 208 aa11.18□□□□□ -0.62
HLA-F-221ENST00000444621 PSKH2Q96QS6 385 aa11.18□□□□□ -0.62
HLA-F-221ENST00000444621 C1QTNF2Q9BXJ5 285 aa11.18□□□□□ -0.62
HLA-F-221ENST00000444621 FZD3Q9NPG1 666 aa11.18□□□□□ -0.62
HLA-F-221ENST00000444621 KLHL11Q9NVR0 708 aa11.18□□□□□ -0.62
HLA-F-221ENST00000444621 KCTD5Q9NXV2 234 aa11.18□□□□□ -0.62
HLA-F-221ENST00000444621 ZFR2Q9UPR6 939 aaKnown RBP11.18□□□□□ -0.62
HLA-F-221ENST00000444621 TP53BP1Q12888 1972 aaPredicted RBP11.17□□□□□ -0.62
HLA-F-221ENST00000444621 LRRD1A4D1F6 860 aa11.17□□□□□ -0.62
HLA-F-221ENST00000444621 CFAP69A5D8W1 941 aa11.17□□□□□ -0.62
HLA-F-221ENST00000444621 C10orf142B7Z368 130 aa11.17□□□□□ -0.62
HLA-F-221ENST00000444621 WNT9AO14904 365 aa11.17□□□□□ -0.62
HLA-F-221ENST00000444621 MTA2O94776 668 aa11.17□□□□□ -0.62
HLA-F-221ENST00000444621 CYP2A6P11509 494 aaPredicted RBP11.17□□□□□ -0.62
HLA-F-221ENST00000444621 TNNT1P13805 278 aa11.17□□□□□ -0.62
HLA-F-221ENST00000444621 CCNCP24863 283 aa11.17□□□□□ -0.62
HLA-F-221ENST00000444621 HTR1BP28222 390 aa11.17□□□□□ -0.62
HLA-F-221ENST00000444621 EPHA8P29322 1005 aaPredicted RBP11.17□□□□□ -0.62
HLA-F-221ENST00000444621 ABL2P42684 1182 aa11.17□□□□□ -0.62
HLA-F-221ENST00000444621 NAP1L1P55209 391 aaKnown RBP11.17□□□□□ -0.62
HLA-F-221ENST00000444621 HNRNPKP61978 463 aaKnown RBP eCLIP11.17□□□□□ -0.62
HLA-F-221ENST00000444621 SLC10A7Q0GE19 358 aa11.17□□□□□ -0.62
HLA-F-221ENST00000444621 PAFAH1B3Q15102 231 aaKnown RBP11.17□□□□□ -0.62
HLA-F-221ENST00000444621 LRRC38Q5VT99 294 aa11.17□□□□□ -0.62
HLA-F-221ENST00000444621 TXNRD3NBQ6F5E7 133 aa11.17□□□□□ -0.62
HLA-F-221ENST00000444621 KYAT3Q6YP21 454 aaKnown RBP11.17□□□□□ -0.62
HLA-F-221ENST00000444621 ARHGAP36Q6ZRI8 547 aa11.17□□□□□ -0.62
HLA-F-221ENST00000444621 ABI3BPQ7Z7G0 1075 aa11.17□□□□□ -0.62
HLA-F-221ENST00000444621 EID2Q8N6I1 236 aa11.17□□□□□ -0.62
HLA-F-221ENST00000444621 PDCD7Q8N8D1 485 aaKnown RBP11.17□□□□□ -0.62
HLA-F-221ENST00000444621 SAP25Q8TEE9 199 aa11.17□□□□□ -0.62
HLA-F-221ENST00000444621 PDCD6IPQ8WUM4 868 aaKnown RBP11.17□□□□□ -0.62
HLA-F-221ENST00000444621 BTN2A2Q8WVV5 523 aa11.17□□□□□ -0.62
HLA-F-221ENST00000444621 TSC1Q92574 1164 aa11.17□□□□□ -0.62
HLA-F-221ENST00000444621 PANX2Q96RD6 677 aa11.17□□□□□ -0.62
HLA-F-221ENST00000444621 NUDCD1Q96RS6 583 aa11.17□□□□□ -0.62
HLA-F-221ENST00000444621 WRAP53Q9BUR4 548 aaKnown RBP11.17□□□□□ -0.62
HLA-F-221ENST00000444621 RBSNQ9H1K0 784 aa11.17□□□□□ -0.62
HLA-F-221ENST00000444621 PRORYQ9H606 182 aa11.17□□□□□ -0.62
HLA-F-221ENST00000444621 ETNK2Q9NVF9 386 aa11.17□□□□□ -0.62
HLA-F-221ENST00000444621 DNAJC28Q9NX36 388 aa11.17□□□□□ -0.62
HLA-F-221ENST00000444621 AMACRQ9UHK6 382 aa11.17□□□□□ -0.62
HLA-F-221ENST00000444621 PCDHA13Q9Y5I0 950 aa11.17□□□□□ -0.62
HLA-F-221ENST00000444621 TRPM6Q9BX84 2022 aa11.17□□□□□ -0.62
HLA-F-221ENST00000444621 TSPAN11A1L157 253 aa11.16□□□□□ -0.62
HLA-F-221ENST00000444621 ZNF487B1APH4 448 aa11.16□□□□□ -0.62
HLA-F-221ENST00000444621 RNF103O00237 685 aa11.16□□□□□ -0.62
HLA-F-221ENST00000444621 RIOK3O14730 519 aaKnown RBP11.16□□□□□ -0.62
HLA-F-221ENST00000444621 AREL1O15033 823 aa11.16□□□□□ -0.62
HLA-F-221ENST00000444621 MATN3O15232 486 aa11.16□□□□□ -0.62
HLA-F-221ENST00000444621 BUB1BO60566 1050 aaPredicted RBP11.16□□□□□ -0.62
HLA-F-221ENST00000444621 MAFKO60675 156 aa11.16□□□□□ -0.62
HLA-F-221ENST00000444621 SOCS5O75159 536 aa11.16□□□□□ -0.62
HLA-F-221ENST00000444621 C1SP09871 688 aa11.16□□□□□ -0.62
HLA-F-221ENST00000444621 ELFN1P0C7U0 828 aa11.16□□□□□ -0.62
HLA-F-221ENST00000444621 CETN2P41208 172 aa11.16□□□□□ -0.62
HLA-F-221ENST00000444621 GARSP41250 739 aaKnown RBP11.16□□□□□ -0.62
HLA-F-221ENST00000444621 BLKP51451 505 aa11.16□□□□□ -0.62
HLA-F-221ENST00000444621 CLDN2P57739 230 aa11.16□□□□□ -0.62
HLA-F-221ENST00000444621 TAS2R40P59535 323 aa11.16□□□□□ -0.62
HLA-F-221ENST00000444621 MMRN1Q13201 1228 aa11.16□□□□□ -0.62
HLA-F-221ENST00000444621 PDE1CQ14123 709 aaPredicted RBP11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms