RNA–Protein interactions for RNA: ENST00000441725.1

CDC42BPA-207, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5

Gene CDC42BPA, Length 2,183 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-207ENST00000441725 PACS1Q6VY07 963 aa4.21□□□□□ -1.73
CDC42BPA-207ENST00000441725 GSTA5Q7RTV2 222 aa4.21□□□□□ -1.73
CDC42BPA-207ENST00000441725 CCDC91Q7Z6B0 441 aa4.21□□□□□ -1.73
CDC42BPA-207ENST00000441725 TRIM74Q86UV6 250 aa4.21□□□□□ -1.73
CDC42BPA-207ENST00000441725 TRIM73Q86UV7 250 aa4.21□□□□□ -1.73
CDC42BPA-207ENST00000441725 AACSQ86V21 672 aa4.21□□□□□ -1.73
CDC42BPA-207ENST00000441725 TDRPQ86YL5 185 aa4.21□□□□□ -1.73
CDC42BPA-207ENST00000441725 KIAA2013Q8IYS2 634 aa4.21□□□□□ -1.73
CDC42BPA-207ENST00000441725 GDAP1Q8TB36 358 aa4.21□□□□□ -1.73
CDC42BPA-207ENST00000441725 Q8TCH9 128 aa4.21□□□□□ -1.73
CDC42BPA-207ENST00000441725 MRPS27Q92552 414 aaKnown RBP4.21□□□□□ -1.73
CDC42BPA-207ENST00000441725 GBP5Q96PP8 586 aa4.21□□□□□ -1.73
CDC42BPA-207ENST00000441725 NTPCRQ9BSD7 190 aaKnown RBP4.21□□□□□ -1.73
CDC42BPA-207ENST00000441725 FRMD8Q9BZ67 464 aaPredicted RBP4.21□□□□□ -1.73
CDC42BPA-207ENST00000441725 NUF2Q9BZD4 464 aa4.21□□□□□ -1.73
CDC42BPA-207ENST00000441725 NACA2Q9H009 215 aa4.21□□□□□ -1.73
CDC42BPA-207ENST00000441725 ASAH2Q9NR71 780 aa4.21□□□□□ -1.73
CDC42BPA-207ENST00000441725 EXOC1Q9NV70 894 aa4.21□□□□□ -1.73
CDC42BPA-207ENST00000441725 TBC1D7Q9P0N9 293 aa4.21□□□□□ -1.73
CDC42BPA-207ENST00000441725 ANAPC2Q9UJX6 822 aa4.21□□□□□ -1.73
CDC42BPA-207ENST00000441725 PPIEQ9UNP9 301 aaKnown RBP4.21□□□□□ -1.73
CDC42BPA-207ENST00000441725 HEMK1Q9Y5R4 338 aaPredicted RBP4.21□□□□□ -1.73
CDC42BPA-207ENST00000441725 SPATA31D1Q6ZQQ2 1576 aa4.21□□□□□ -1.74
CDC42BPA-207ENST00000441725 CBY3A6NI87 242 aa4.21□□□□□ -1.74
CDC42BPA-207ENST00000441725 DBX1A6NMT0 343 aa4.21□□□□□ -1.74
CDC42BPA-207ENST00000441725 NPIPB11E5RHQ5 1161 aa4.21□□□□□ -1.74
CDC42BPA-207ENST00000441725 H0YIZ8 118 aa4.21□□□□□ -1.74
CDC42BPA-207ENST00000441725 HS6ST1O60243 411 aa4.21□□□□□ -1.74
CDC42BPA-207ENST00000441725 DIAPH2O60879 1101 aa4.21□□□□□ -1.74
CDC42BPA-207ENST00000441725 MTRF1O75570 445 aaKnown RBP4.21□□□□□ -1.74
CDC42BPA-207ENST00000441725 NKX2-2O95096 273 aa4.21□□□□□ -1.74
CDC42BPA-207ENST00000441725 GOSR1O95249 250 aa4.21□□□□□ -1.74
CDC42BPA-207ENST00000441725 IL7RP16871 459 aa4.21□□□□□ -1.74
CDC42BPA-207ENST00000441725 ARSFP54793 590 aa4.21□□□□□ -1.74
CDC42BPA-207ENST00000441725 ME3Q16798 604 aa4.21□□□□□ -1.74
CDC42BPA-207ENST00000441725 ABRAXAS1Q6UWZ7 409 aa4.21□□□□□ -1.74
CDC42BPA-207ENST00000441725 CCDC186Q7Z3E2 898 aa4.21□□□□□ -1.74
CDC42BPA-207ENST00000441725 METTL23Q86XA0 190 aa4.21□□□□□ -1.74
CDC42BPA-207ENST00000441725 RHPN2Q8IUC4 686 aa4.21□□□□□ -1.74
CDC42BPA-207ENST00000441725 DHX40Q8IX18 779 aaKnown RBP4.21□□□□□ -1.74
CDC42BPA-207ENST00000441725 OR2A14Q96R47 310 aa4.21□□□□□ -1.74
CDC42BPA-207ENST00000441725 THAP7Q9BT49 309 aaPredicted RBP4.21□□□□□ -1.74
CDC42BPA-207ENST00000441725 FSD1LQ9BXM9 530 aa4.21□□□□□ -1.74
CDC42BPA-207ENST00000441725 IFIH1Q9BYX4 1025 aaKnown RBP4.21□□□□□ -1.74
CDC42BPA-207ENST00000441725 XYLT2Q9H1B5 865 aa4.21□□□□□ -1.74
CDC42BPA-207ENST00000441725 PLEKHA4Q9H4M7 779 aa4.21□□□□□ -1.74
CDC42BPA-207ENST00000441725 TRPV4Q9HBA0 871 aa4.21□□□□□ -1.74
CDC42BPA-207ENST00000441725 RANGRFQ9HD47 186 aaPredicted RBP4.21□□□□□ -1.74
CDC42BPA-207ENST00000441725 TRPV5Q9NQA5 729 aa4.21□□□□□ -1.74
CDC42BPA-207ENST00000441725 DNAJB9Q9UBS3 223 aa4.21□□□□□ -1.74
CDC42BPA-207ENST00000441725 ADAMTS5Q9UNA0 930 aa4.21□□□□□ -1.74
CDC42BPA-207ENST00000441725 ICKQ9UPZ9 632 aa4.21□□□□□ -1.74
CDC42BPA-207ENST00000441725 DDX52Q9Y2R4 599 aaKnown RBP eCLIP4.21□□□□□ -1.74
CDC42BPA-207ENST00000441725 CLDN16Q9Y5I7 305 aa4.21□□□□□ -1.74
CDC42BPA-207ENST00000441725 USP17L23D6RBM5 183 aa4.2□□□□□ -1.74
CDC42BPA-207ENST00000441725 F8VZ95 297 aa4.2□□□□□ -1.74
CDC42BPA-207ENST00000441725 CYP1A2P05177 515 aa4.2□□□□□ -1.74
CDC42BPA-207ENST00000441725 NPSP0C0P6 89 aa4.2□□□□□ -1.74
CDC42BPA-207ENST00000441725 CYP2D6P10635 497 aa4.2□□□□□ -1.74
CDC42BPA-207ENST00000441725 ITGAMP11215 1152 aa4.2□□□□□ -1.74
CDC42BPA-207ENST00000441725 SLC2A4P14672 509 aa4.2□□□□□ -1.74
CDC42BPA-207ENST00000441725 TRIM21P19474 475 aaKnown RBP4.2□□□□□ -1.74
CDC42BPA-207ENST00000441725 ATP5F1P24539 256 aaPredicted RBP4.2□□□□□ -1.74
CDC42BPA-207ENST00000441725 CDAP32320 146 aa4.2□□□□□ -1.74
CDC42BPA-207ENST00000441725 SKIV2L2P42285 1042 aaKnown RBP4.2□□□□□ -1.74
CDC42BPA-207ENST00000441725 MXI1P50539 228 aa4.2□□□□□ -1.74
CDC42BPA-207ENST00000441725 CLCN3P51790 818 aa4.2□□□□□ -1.74
CDC42BPA-207ENST00000441725 CLDN2P57739 230 aa4.2□□□□□ -1.74
CDC42BPA-207ENST00000441725 LRRC74AQ0VAA2 488 aa4.2□□□□□ -1.74
CDC42BPA-207ENST00000441725 OLIG2Q13516 323 aa4.2□□□□□ -1.74
CDC42BPA-207ENST00000441725 BAATQ14032 418 aaPredicted RBP4.2□□□□□ -1.74
CDC42BPA-207ENST00000441725 PTPRRQ15256 657 aa4.2□□□□□ -1.74
CDC42BPA-207ENST00000441725 AP1ARQ63HQ0 302 aa4.2□□□□□ -1.74
CDC42BPA-207ENST00000441725 RANBP10Q6VN20 620 aa4.2□□□□□ -1.74
CDC42BPA-207ENST00000441725 CFAP77Q6ZQR2 320 aa4.2□□□□□ -1.74
CDC42BPA-207ENST00000441725 CHST3Q7LGC8 479 aa4.2□□□□□ -1.74
CDC42BPA-207ENST00000441725 BCDIN3DQ7Z5W3 292 aaKnown RBP4.2□□□□□ -1.74
CDC42BPA-207ENST00000441725 KLBQ86Z14 1044 aa4.2□□□□□ -1.74
CDC42BPA-207ENST00000441725 FAM185AQ8N0U4 392 aa4.2□□□□□ -1.74
CDC42BPA-207ENST00000441725 ZNF619Q8N2I2 560 aa4.2□□□□□ -1.74
CDC42BPA-207ENST00000441725 MINDY1Q8N5J2 469 aa4.2□□□□□ -1.74
CDC42BPA-207ENST00000441725 TMEM217Q8N7C4 229 aa4.2□□□□□ -1.74
CDC42BPA-207ENST00000441725 ZNF540Q8NDQ6 660 aa4.2□□□□□ -1.74
CDC42BPA-207ENST00000441725 UTP15Q8TED0 518 aaKnown RBP4.2□□□□□ -1.74
CDC42BPA-207ENST00000441725 ZNF606Q8WXB4 792 aa4.2□□□□□ -1.74
CDC42BPA-207ENST00000441725 ASB10Q8WXI3 467 aa4.2□□□□□ -1.74
CDC42BPA-207ENST00000441725 ARHGEF26Q96DR7 871 aa4.2□□□□□ -1.74
CDC42BPA-207ENST00000441725 THUMPD3Q9BV44 507 aaKnown RBP4.2□□□□□ -1.74
CDC42BPA-207ENST00000441725 TEX13BQ9BXU2 312 aa4.2□□□□□ -1.74
CDC42BPA-207ENST00000441725 TRIM2Q9C040 744 aa4.2□□□□□ -1.74
CDC42BPA-207ENST00000441725 HRH4Q9H3N8 390 aa4.2□□□□□ -1.74
CDC42BPA-207ENST00000441725 MED4Q9NPJ6 270 aa4.2□□□□□ -1.74
CDC42BPA-207ENST00000441725 MTF2Q9Y483 593 aaPredicted RBP4.2□□□□□ -1.74
CDC42BPA-207ENST00000441725 AOX1Q06278 1338 aa4.2□□□□□ -1.74
CDC42BPA-207ENST00000441725 A0A0A0MQY5 61 aa4.2□□□□□ -1.74
CDC42BPA-207ENST00000441725 TRBC2A0A5B9 178 aa4.2□□□□□ -1.74
CDC42BPA-207ENST00000441725 PLOD2O00469 737 aa4.2□□□□□ -1.74
CDC42BPA-207ENST00000441725 FOXD2O60548 495 aaPredicted RBP4.2□□□□□ -1.74
CDC42BPA-207ENST00000441725 NDUFS3O75489 264 aa4.2□□□□□ -1.74
CDC42BPA-207ENST00000441725 FGFR1OPO95684 399 aaKnown RBP4.2□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms