RNA–Protein interactions for RNA: ENST00000441587.2

ALMS1-IT1-201, ALMS1 intronic transcript 1, humanhuman

TSL 1 (best) BASIC

Gene ALMS1-IT1, Length 2,107 nt, Biotype sense intronic.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1-IT1-201ENST00000441587 TBXAS1P24557 533 aaPredicted RBP5.96□□□□□ -1.46
ALMS1-IT1-201ENST00000441587 NFKBIAP25963 317 aa5.96□□□□□ -1.46
ALMS1-IT1-201ENST00000441587 GCH1P30793 250 aa5.96□□□□□ -1.46
ALMS1-IT1-201ENST00000441587 CLCN7P51798 805 aa5.96□□□□□ -1.46
ALMS1-IT1-201ENST00000441587 GPR68Q15743 365 aa5.96□□□□□ -1.46
ALMS1-IT1-201ENST00000441587 TBCEQ15813 527 aaPredicted RBP5.96□□□□□ -1.46
ALMS1-IT1-201ENST00000441587 AANATQ16613 207 aa5.96□□□□□ -1.46
ALMS1-IT1-201ENST00000441587 MPP7Q5T2T1 576 aa5.96□□□□□ -1.46
ALMS1-IT1-201ENST00000441587 SGMS1Q86VZ5 419 aa5.96□□□□□ -1.46
ALMS1-IT1-201ENST00000441587 SPACA3Q8IXA5 215 aa5.96□□□□□ -1.46
ALMS1-IT1-201ENST00000441587 SYCE1Q8N0S2 351 aa5.96□□□□□ -1.46
ALMS1-IT1-201ENST00000441587 PQLC1Q8N2U9 271 aa5.96□□□□□ -1.46
ALMS1-IT1-201ENST00000441587 PI4KAP1Q8N8J0 262 aa5.96□□□□□ -1.46
ALMS1-IT1-201ENST00000441587 BANPQ8N9N5 519 aa5.96□□□□□ -1.46
ALMS1-IT1-201ENST00000441587 OR6J1Q8NGC5 347 aa5.96□□□□□ -1.46
ALMS1-IT1-201ENST00000441587 OR9A1PQ8NGU1 263 aa5.96□□□□□ -1.46
ALMS1-IT1-201ENST00000441587 OR6S1Q8NH40 331 aa5.96□□□□□ -1.46
ALMS1-IT1-201ENST00000441587 CLHC1Q8NHS4 586 aa5.96□□□□□ -1.46
ALMS1-IT1-201ENST00000441587 CFHR4Q92496 578 aa5.96□□□□□ -1.46
ALMS1-IT1-201ENST00000441587 RMDN1Q96DB5 314 aa5.96□□□□□ -1.46
ALMS1-IT1-201ENST00000441587 SNF8Q96H20 258 aa5.96□□□□□ -1.46
ALMS1-IT1-201ENST00000441587 ANKRD27Q96NW4 1050 aa5.96□□□□□ -1.46
ALMS1-IT1-201ENST00000441587 RBM15Q96T37 977 aaKnown RBP eCLIP5.96□□□□□ -1.46
ALMS1-IT1-201ENST00000441587 APOL6Q9BWW8 343 aa5.96□□□□□ -1.46
ALMS1-IT1-201ENST00000441587 FAM129AQ9BZQ8 928 aa5.96□□□□□ -1.46
ALMS1-IT1-201ENST00000441587 CLK4Q9HAZ1 481 aaKnown RBP5.96□□□□□ -1.46
ALMS1-IT1-201ENST00000441587 R3HDM2Q9Y2K5 976 aaKnown RBP5.96□□□□□ -1.46
ALMS1-IT1-201ENST00000441587 SIT1Q9Y3P8 196 aa5.96□□□□□ -1.46
ALMS1-IT1-201ENST00000441587 CCL27Q9Y4X3 112 aa5.96□□□□□ -1.46
ALMS1-IT1-201ENST00000441587 BZW2Q9Y6E2 419 aaKnown RBP5.96□□□□□ -1.46
ALMS1-IT1-201ENST00000441587 TRPM3Q9HCF6 1732 aaPredicted RBP5.96□□□□□ -1.46
ALMS1-IT1-201ENST00000441587 C1orf167Q5SNV9 1468 aa5.95□□□□□ -1.46
ALMS1-IT1-201ENST00000441587 GRIN2DO15399 1336 aa5.95□□□□□ -1.46
ALMS1-IT1-201ENST00000441587 AOX1Q06278 1338 aa5.95□□□□□ -1.46
ALMS1-IT1-201ENST00000441587 SALL3Q9BXA9 1300 aa5.95□□□□□ -1.46
ALMS1-IT1-201ENST00000441587 BECN2A8MW95 431 aa5.95□□□□□ -1.46
ALMS1-IT1-201ENST00000441587 DNPH1O43598 174 aa5.95□□□□□ -1.46
ALMS1-IT1-201ENST00000441587 METTL18O95568 372 aa5.95□□□□□ -1.46
ALMS1-IT1-201ENST00000441587 GLP2RO95838 553 aa5.95□□□□□ -1.46
ALMS1-IT1-201ENST00000441587 CLPTM1O96005 669 aa5.95□□□□□ -1.46
ALMS1-IT1-201ENST00000441587 AMY1AP04745 511 aa5.95□□□□□ -1.46
ALMS1-IT1-201ENST00000441587 URODP06132 367 aa5.95□□□□□ -1.46
ALMS1-IT1-201ENST00000441587 CCDC166P0CW27 439 aa5.95□□□□□ -1.46
ALMS1-IT1-201ENST00000441587 FUT4P22083 530 aa5.95□□□□□ -1.46
ALMS1-IT1-201ENST00000441587 KCNC1P48547 511 aa5.95□□□□□ -1.46
ALMS1-IT1-201ENST00000441587 PMS2P54278 862 aa5.95□□□□□ -1.46
ALMS1-IT1-201ENST00000441587 RAC3P60763 192 aa5.95□□□□□ -1.46
ALMS1-IT1-201ENST00000441587 DLG4P78352 724 aa5.95□□□□□ -1.46
ALMS1-IT1-201ENST00000441587 NKX3-2P78367 333 aa5.95□□□□□ -1.46
ALMS1-IT1-201ENST00000441587 ZMYND11Q15326 602 aa5.95□□□□□ -1.46
ALMS1-IT1-201ENST00000441587 MST1LQ2TV78 715 aa5.95□□□□□ -1.46
ALMS1-IT1-201ENST00000441587 TMTC4Q5T4D3 741 aa5.95□□□□□ -1.46
ALMS1-IT1-201ENST00000441587 CD276Q5ZPR3 534 aa5.95□□□□□ -1.46
ALMS1-IT1-201ENST00000441587 ABHD15Q6UXT9 468 aa5.95□□□□□ -1.46
ALMS1-IT1-201ENST00000441587 PXKQ7Z7A4 578 aa5.95□□□□□ -1.46
ALMS1-IT1-201ENST00000441587 STX12Q86Y82 276 aa5.95□□□□□ -1.46
ALMS1-IT1-201ENST00000441587 DNAJC10Q8IXB1 793 aa5.95□□□□□ -1.46
ALMS1-IT1-201ENST00000441587 RTL3Q8N8U3 475 aaKnown RBP5.95□□□□□ -1.46
ALMS1-IT1-201ENST00000441587 OR56A3Q8NH54 315 aa5.95□□□□□ -1.46
ALMS1-IT1-201ENST00000441587 MAIP1Q8WWC4 291 aa5.95□□□□□ -1.46
ALMS1-IT1-201ENST00000441587 PPP2R3CQ969Q6 453 aa5.95□□□□□ -1.46
ALMS1-IT1-201ENST00000441587 PGAP3Q96FM1 320 aaPredicted RBP5.95□□□□□ -1.46
ALMS1-IT1-201ENST00000441587 TOE1Q96GM8 510 aaKnown RBP5.95□□□□□ -1.46
ALMS1-IT1-201ENST00000441587 C19orf43Q9BQ61 176 aa5.95□□□□□ -1.46
ALMS1-IT1-201ENST00000441587 REEP2Q9BRK0 252 aa5.95□□□□□ -1.46
ALMS1-IT1-201ENST00000441587 NUP58Q9BVL2 599 aa5.95□□□□□ -1.46
ALMS1-IT1-201ENST00000441587 CCSER1Q9C0I3 900 aa5.95□□□□□ -1.46
ALMS1-IT1-201ENST00000441587 ABHD16BQ9H3Z7 469 aa5.95□□□□□ -1.46
ALMS1-IT1-201ENST00000441587 ANKZF1Q9H8Y5 726 aa5.95□□□□□ -1.46
ALMS1-IT1-201ENST00000441587 MKNK2Q9HBH9 465 aa5.95□□□□□ -1.46
ALMS1-IT1-201ENST00000441587 FBRSL1Q9HCM7 1045 aaKnown RBP5.95□□□□□ -1.46
ALMS1-IT1-201ENST00000441587 DDX19AQ9NUU7 478 aaKnown RBP5.95□□□□□ -1.46
ALMS1-IT1-201ENST00000441587 SOHLH2Q9NX45 425 aa5.95□□□□□ -1.46
ALMS1-IT1-201ENST00000441587 SIDT1Q9NXL6 827 aaKnown RBP5.95□□□□□ -1.46
ALMS1-IT1-201ENST00000441587 GALNT8Q9NY28 637 aa5.95□□□□□ -1.46
ALMS1-IT1-201ENST00000441587 CIDEBQ9UHD4 219 aa5.95□□□□□ -1.46
ALMS1-IT1-201ENST00000441587 IPO11Q9UI26 975 aaKnown RBP5.95□□□□□ -1.46
ALMS1-IT1-201ENST00000441587 MID2Q9UJV3 735 aa5.95□□□□□ -1.46
ALMS1-IT1-201ENST00000441587 ZDHHC8Q9ULC8 765 aa5.95□□□□□ -1.46
ALMS1-IT1-201ENST00000441587 RPH3AQ9Y2J0 694 aaPredicted RBP5.95□□□□□ -1.46
ALMS1-IT1-201ENST00000441587 NPHP3Q7Z494 1330 aa5.95□□□□□ -1.46
ALMS1-IT1-201ENST00000441587 SH3TC1Q8TE82 1336 aa5.95□□□□□ -1.46
ALMS1-IT1-201ENST00000441587 A0A1B0GVG6 124 aa5.95□□□□□ -1.46
ALMS1-IT1-201ENST00000441587 SRRM3A6NNA2 597 aaPredicted RBP5.95□□□□□ -1.46
ALMS1-IT1-201ENST00000441587 TARM1B6A8C7 271 aa5.95□□□□□ -1.46
ALMS1-IT1-201ENST00000441587 H3BNC9 293 aa5.95□□□□□ -1.46
ALMS1-IT1-201ENST00000441587 KCNQ3O43525 872 aa5.95□□□□□ -1.46
ALMS1-IT1-201ENST00000441587 TLR2O60603 784 aa5.95□□□□□ -1.46
ALMS1-IT1-201ENST00000441587 SURF6O75683 361 aaKnown RBP5.95□□□□□ -1.46
ALMS1-IT1-201ENST00000441587 TMCC1O94876 653 aa5.95□□□□□ -1.46
ALMS1-IT1-201ENST00000441587 MATN4O95460 622 aa5.95□□□□□ -1.46
ALMS1-IT1-201ENST00000441587 GLAP06280 429 aa5.95□□□□□ -1.46
ALMS1-IT1-201ENST00000441587 NCF1P14598 390 aaPredicted RBP5.95□□□□□ -1.46
ALMS1-IT1-201ENST00000441587 STARP49675 285 aa5.95□□□□□ -1.46
ALMS1-IT1-201ENST00000441587 CASP9P55211 416 aa5.95□□□□□ -1.46
ALMS1-IT1-201ENST00000441587 OXCT1P55809 520 aa5.95□□□□□ -1.46
ALMS1-IT1-201ENST00000441587 GNGT1P63211 74 aa5.95□□□□□ -1.46
ALMS1-IT1-201ENST00000441587 CYP27A1Q02318 531 aa5.95□□□□□ -1.46
ALMS1-IT1-201ENST00000441587 CD69Q07108 199 aa5.95□□□□□ -1.46
ALMS1-IT1-201ENST00000441587 NPRL3Q12980 569 aa5.95□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms