RNA–Protein interactions for RNA: ENST00000440118.1

SHROOM1-204, Transcript of shroom family member 1, humanhuman

TSL 2

Gene SHROOM1, Length 1,080 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-204ENST00000440118 RIOK3O14730 519 aaKnown RBP20■□□□□ 0.79
SHROOM1-204ENST00000440118 SCAMP1O15126 338 aa20■□□□□ 0.79
SHROOM1-204ENST00000440118 AQP9O43315 295 aa20■□□□□ 0.79
SHROOM1-204ENST00000440118 BUB1BO60566 1050 aaPredicted RBP20■□□□□ 0.79
SHROOM1-204ENST00000440118 PCCBP05166 539 aa20■□□□□ 0.79
SHROOM1-204ENST00000440118 H2AFZP0C0S5 128 aa20■□□□□ 0.79
SHROOM1-204ENST00000440118 ELFN1P0C7U0 828 aa20■□□□□ 0.79
SHROOM1-204ENST00000440118 NFKBIAP25963 317 aa20■□□□□ 0.79
SHROOM1-204ENST00000440118 HTR1BP28222 390 aa20■□□□□ 0.79
SHROOM1-204ENST00000440118 LIG3P49916 1009 aa20■□□□□ 0.79
SHROOM1-204ENST00000440118 DUSP3P51452 185 aaPredicted RBP20■□□□□ 0.79
SHROOM1-204ENST00000440118 YPEL5P62699 121 aa20■□□□□ 0.79
SHROOM1-204ENST00000440118 NSUN2Q08J23 767 aaKnown RBP eCLIP20■□□□□ 0.79
SHROOM1-204ENST00000440118 SLC10A7Q0GE19 358 aa20■□□□□ 0.79
SHROOM1-204ENST00000440118 FAXCQ5TGI0 409 aa20■□□□□ 0.79
SHROOM1-204ENST00000440118 TXNRD3NBQ6F5E7 133 aa20■□□□□ 0.79
SHROOM1-204ENST00000440118 MACC1Q6ZN28 852 aa20■□□□□ 0.79
SHROOM1-204ENST00000440118 H2AFVQ71UI9 128 aa20■□□□□ 0.79
SHROOM1-204ENST00000440118 TP53INP2Q8IXH6 220 aa20■□□□□ 0.79
SHROOM1-204ENST00000440118 TP53I13Q8NBR0 393 aaPredicted RBP20■□□□□ 0.79
SHROOM1-204ENST00000440118 OR8K1Q8NGG5 319 aa20■□□□□ 0.79
SHROOM1-204ENST00000440118 NXPE2Q96DL1 559 aa20■□□□□ 0.79
SHROOM1-204ENST00000440118 APOLD1Q96LR9 279 aa20■□□□□ 0.79
SHROOM1-204ENST00000440118 PSKH2Q96QS6 385 aa20■□□□□ 0.79
SHROOM1-204ENST00000440118 SCUBE2Q9NQ36 999 aa20■□□□□ 0.79
SHROOM1-204ENST00000440118 ETNK2Q9NVF9 386 aa20■□□□□ 0.79
SHROOM1-204ENST00000440118 UVRAGQ9P2Y5 699 aa20■□□□□ 0.79
SHROOM1-204ENST00000440118 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP19.99■□□□□ 0.79
SHROOM1-204ENST00000440118 TMEM110-MUSTN1A8MSY1 372 aa19.99■□□□□ 0.79
SHROOM1-204ENST00000440118 K7ESM1 405 aa19.99■□□□□ 0.79
SHROOM1-204ENST00000440118 E2F1Q01094 437 aa19.99■□□□□ 0.79
SHROOM1-204ENST00000440118 SLC18A3Q16572 532 aa19.99■□□□□ 0.79
SHROOM1-204ENST00000440118 TPRG1LQ5T0D9 272 aa19.99■□□□□ 0.79
SHROOM1-204ENST00000440118 PHACTR4Q8IZ21 702 aa19.99■□□□□ 0.79
SHROOM1-204ENST00000440118 RBFAQ8N0V3 343 aa19.99■□□□□ 0.79
SHROOM1-204ENST00000440118 KCTD6Q8NC69 237 aa19.99■□□□□ 0.79
SHROOM1-204ENST00000440118 ANP32EQ9BTT0 268 aa19.99■□□□□ 0.79
SHROOM1-204ENST00000440118 CAAP1Q9H8G2 361 aa19.99■□□□□ 0.79
SHROOM1-204ENST00000440118 MBNL1Q9NR56 388 aaKnown RBP19.99■□□□□ 0.79
SHROOM1-204ENST00000440118 RCOR3Q9P2K3 495 aaPredicted RBP19.99■□□□□ 0.79
SHROOM1-204ENST00000440118 LCMT1Q9UIC8 334 aa19.99■□□□□ 0.79
SHROOM1-204ENST00000440118 DOLKQ9UPQ8 538 aa19.99■□□□□ 0.79
SHROOM1-204ENST00000440118 FREM2Q5SZK8 3169 aa19.99■□□□□ 0.79
SHROOM1-204ENST00000440118 MUSKO15146 869 aa19.98■□□□□ 0.79
SHROOM1-204ENST00000440118 CKMT1AP12532 417 aa19.98■□□□□ 0.79
SHROOM1-204ENST00000440118 HNRNPH3P31942 346 aaKnown RBP19.98■□□□□ 0.79
SHROOM1-204ENST00000440118 MMP13P45452 471 aa19.98■□□□□ 0.79
SHROOM1-204ENST00000440118 PPARDQ03181 441 aa19.98■□□□□ 0.79
SHROOM1-204ENST00000440118 CYP4F3Q08477 520 aa19.98■□□□□ 0.79
SHROOM1-204ENST00000440118 EIF2B5Q13144 721 aaKnown RBP19.98■□□□□ 0.79
SHROOM1-204ENST00000440118 DEFB133Q30KQ1 61 aa19.98■□□□□ 0.79
SHROOM1-204ENST00000440118 PRRT3Q5FWE3 981 aa19.98■□□□□ 0.79
SHROOM1-204ENST00000440118 ZCCHC8Q6NZY4 707 aaKnown RBP19.98■□□□□ 0.79
SHROOM1-204ENST00000440118 ZSWIM9Q86XI8 627 aa19.98■□□□□ 0.79
SHROOM1-204ENST00000440118 ATL2Q8NHH9 583 aa19.98■□□□□ 0.79
SHROOM1-204ENST00000440118 ABCG4Q9H172 646 aa19.98■□□□□ 0.79
SHROOM1-204ENST00000440118 USP29Q9HBJ7 922 aa19.98■□□□□ 0.79
SHROOM1-204ENST00000440118 HAUS2Q9NVX0 235 aa19.98■□□□□ 0.79
SHROOM1-204ENST00000440118 NCKIPSDQ9NZQ3 722 aa19.98■□□□□ 0.79
SHROOM1-204ENST00000440118 CLCA2Q9UQC9 943 aa19.98■□□□□ 0.79
SHROOM1-204ENST00000440118 DMXL2Q8TDJ6 3036 aa19.97■□□□□ 0.79
SHROOM1-204ENST00000440118 PROSCO94903 275 aa19.97■□□□□ 0.79
SHROOM1-204ENST00000440118 KRT7P08729 469 aa19.97■□□□□ 0.79
SHROOM1-204ENST00000440118 BLKP51451 505 aa19.97■□□□□ 0.79
SHROOM1-204ENST00000440118 TARDBPQ13148 414 aaKnown RBP eCLIP19.97■□□□□ 0.79
SHROOM1-204ENST00000440118 MMRN1Q13201 1228 aa19.97■□□□□ 0.79
SHROOM1-204ENST00000440118 WSCD2Q2TBF2 565 aa19.97■□□□□ 0.79
SHROOM1-204ENST00000440118 MARC1Q5VT66 337 aa19.97■□□□□ 0.79
SHROOM1-204ENST00000440118 MAP7D3Q8IWC1 876 aa19.97■□□□□ 0.79
SHROOM1-204ENST00000440118 GLMNQ92990 594 aa19.97■□□□□ 0.79
SHROOM1-204ENST00000440118 DNAJC7Q99615 494 aa19.97■□□□□ 0.79
SHROOM1-204ENST00000440118 PACSIN1Q9BY11 444 aa19.97■□□□□ 0.79
SHROOM1-204ENST00000440118 KLF15Q9UIH9 416 aa19.97■□□□□ 0.79
SHROOM1-204ENST00000440118 TTLL3Q9Y4R7 772 aa19.97■□□□□ 0.79
SHROOM1-204ENST00000440118 AK5Q9Y6K8 562 aa19.97■□□□□ 0.79
SHROOM1-204ENST00000440118 CSNK1G3Q9Y6M4 447 aa19.97■□□□□ 0.79
SHROOM1-204ENST00000440118 LRP4O75096 1905 aa19.96■□□□□ 0.79
SHROOM1-204ENST00000440118 A0A1W2PQ67 120 aa19.96■□□□□ 0.79
SHROOM1-204ENST00000440118 SSU72P8A0A1W2PR75 194 aa19.96■□□□□ 0.79
SHROOM1-204ENST00000440118 TTC24A2A3L6 582 aaPredicted RBP19.96■□□□□ 0.79
SHROOM1-204ENST00000440118 A8MX80 341 aa19.96■□□□□ 0.79
SHROOM1-204ENST00000440118 MFSD11O43934 449 aa19.96■□□□□ 0.79
SHROOM1-204ENST00000440118 MAFKO60675 156 aa19.96■□□□□ 0.79
SHROOM1-204ENST00000440118 SOCS5O75159 536 aa19.96■□□□□ 0.79
SHROOM1-204ENST00000440118 CPP00450 1065 aa19.96■□□□□ 0.79
SHROOM1-204ENST00000440118 ANXA6P08133 673 aa19.96■□□□□ 0.79
SHROOM1-204ENST00000440118 MYF5P13349 255 aa19.96■□□□□ 0.79
SHROOM1-204ENST00000440118 CTSEP14091 401 aa19.96■□□□□ 0.79
SHROOM1-204ENST00000440118 MAXP61244 160 aa19.96■□□□□ 0.79
SHROOM1-204ENST00000440118 ITKQ08881 620 aa19.96■□□□□ 0.79
SHROOM1-204ENST00000440118 C1orf61Q13536 156 aa19.96■□□□□ 0.79
SHROOM1-204ENST00000440118 NFATC4Q14934 902 aa19.96■□□□□ 0.79
SHROOM1-204ENST00000440118 ACOX1Q15067 660 aa19.96■□□□□ 0.79
SHROOM1-204ENST00000440118 TCEA2Q15560 299 aa19.96■□□□□ 0.79
SHROOM1-204ENST00000440118 CDKN3Q16667 212 aa19.96■□□□□ 0.79
SHROOM1-204ENST00000440118 DPPA4Q7L190 304 aa19.96■□□□□ 0.79
SHROOM1-204ENST00000440118 RD3Q7Z3Z2 195 aa19.96■□□□□ 0.79
SHROOM1-204ENST00000440118 HID1Q8IV36 788 aa19.96■□□□□ 0.79
SHROOM1-204ENST00000440118 VSTM4Q8IW00 320 aa19.96■□□□□ 0.79
SHROOM1-204ENST00000440118 ECHDC3Q96DC8 303 aa19.96■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms