RNA–Protein interactions for RNA: ENST00000439962.1

EDEM3-203, Transcript of ER degradation enhancing alpha-mannosidase like protein 3, humanhuman

TSL 1 (best)

Gene EDEM3, Length 2,872 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EDEM3-203ENST00000439962 TLDC1Q6P9B6 456 aa4.81□□□□□ -1.64
EDEM3-203ENST00000439962 LAYNQ6UX15 382 aa4.81□□□□□ -1.64
EDEM3-203ENST00000439962 SERPINA13PQ6UXR4 307 aa4.81□□□□□ -1.64
EDEM3-203ENST00000439962 TMEM92Q6UXU6 159 aa4.81□□□□□ -1.64
EDEM3-203ENST00000439962 PRR23CQ6ZRP0 262 aa4.81□□□□□ -1.64
EDEM3-203ENST00000439962 NLRP9Q7RTR0 991 aa4.81□□□□□ -1.64
EDEM3-203ENST00000439962 MFN1Q8IWA4 741 aa4.81□□□□□ -1.64
EDEM3-203ENST00000439962 KIRREL3Q8IZU9 778 aa4.81□□□□□ -1.64
EDEM3-203ENST00000439962 PAF1Q8N7H5 531 aa4.81□□□□□ -1.64
EDEM3-203ENST00000439962 FAM71DQ8N9W8 422 aa4.81□□□□□ -1.64
EDEM3-203ENST00000439962 OR6K2Q8NGY2 324 aa4.81□□□□□ -1.64
EDEM3-203ENST00000439962 GDAP1Q8TB36 358 aa4.81□□□□□ -1.64
EDEM3-203ENST00000439962 MGARPQ8TDB4 240 aa4.81□□□□□ -1.64
EDEM3-203ENST00000439962 TCP10LQ8TDR4 215 aa4.81□□□□□ -1.64
EDEM3-203ENST00000439962 FAM172AQ8WUF8 416 aa4.81□□□□□ -1.64
EDEM3-203ENST00000439962 SPATA13Q96N96 652 aa4.81□□□□□ -1.64
EDEM3-203ENST00000439962 SLC2A13Q96QE2 648 aa4.81□□□□□ -1.64
EDEM3-203ENST00000439962 WDR83Q9BRX9 315 aaKnown RBP4.81□□□□□ -1.64
EDEM3-203ENST00000439962 SNRNP25Q9BV90 132 aaKnown RBP4.81□□□□□ -1.64
EDEM3-203ENST00000439962 TSSK1BQ9BXA7 367 aa4.81□□□□□ -1.64
EDEM3-203ENST00000439962 KLF16Q9BXK1 252 aaPredicted RBP4.81□□□□□ -1.64
EDEM3-203ENST00000439962 IQCGQ9H095 443 aaKnown RBP4.81□□□□□ -1.64
EDEM3-203ENST00000439962 WWP1Q9H0M0 922 aa4.81□□□□□ -1.64
EDEM3-203ENST00000439962 MIR1-1HGQ9H1L0 117 aa4.81□□□□□ -1.64
EDEM3-203ENST00000439962 ABCC13Q9NSE7 274 aa4.81□□□□□ -1.64
EDEM3-203ENST00000439962 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP4.81□□□□□ -1.64
EDEM3-203ENST00000439962 HACD3Q9P035 362 aa4.81□□□□□ -1.64
EDEM3-203ENST00000439962 TBK1Q9UHD2 729 aa4.81□□□□□ -1.64
EDEM3-203ENST00000439962 DCDC2Q9UHG0 476 aa4.81□□□□□ -1.64
EDEM3-203ENST00000439962 ZFP69BQ9UJL9 534 aa4.81□□□□□ -1.64
EDEM3-203ENST00000439962 CHKBQ9Y259 395 aa4.81□□□□□ -1.64
EDEM3-203ENST00000439962 C15orf41Q9Y2V0 281 aa4.81□□□□□ -1.64
EDEM3-203ENST00000439962 PLLPQ9Y342 182 aa4.81□□□□□ -1.64
EDEM3-203ENST00000439962 RALGAPA1Q6GYQ0 2036 aa4.81□□□□□ -1.64
EDEM3-203ENST00000439962 MGAQ8IWI9 3026 aa4.81□□□□□ -1.64
EDEM3-203ENST00000439962 ACACAQ13085 2346 aa4.81□□□□□ -1.64
EDEM3-203ENST00000439962 K7EQS6 105 aa4.81□□□□□ -1.64
EDEM3-203ENST00000439962 AGRPO00253 132 aa4.81□□□□□ -1.64
EDEM3-203ENST00000439962 MAN2B1O00754 1011 aa4.81□□□□□ -1.64
EDEM3-203ENST00000439962 COPEO14579 308 aa4.81□□□□□ -1.64
EDEM3-203ENST00000439962 SLC22A2O15244 555 aa4.81□□□□□ -1.64
EDEM3-203ENST00000439962 KIF1CO43896 1103 aaKnown RBP4.81□□□□□ -1.64
EDEM3-203ENST00000439962 GDF9O60383 454 aa4.81□□□□□ -1.64
EDEM3-203ENST00000439962 MAGEC1O60732 1142 aa4.81□□□□□ -1.64
EDEM3-203ENST00000439962 GLRA3O75311 464 aa4.81□□□□□ -1.64
EDEM3-203ENST00000439962 F9P00740 461 aa4.81□□□□□ -1.64
EDEM3-203ENST00000439962 CYBBP04839 570 aa4.81□□□□□ -1.64
EDEM3-203ENST00000439962 APODP05090 189 aa4.81□□□□□ -1.64
EDEM3-203ENST00000439962 APOA4P06727 396 aa4.81□□□□□ -1.64
EDEM3-203ENST00000439962 SP9P0CG40 484 aa4.81□□□□□ -1.64
EDEM3-203ENST00000439962 HOXB2P14652 356 aa4.81□□□□□ -1.64
EDEM3-203ENST00000439962 ETS1P14921 441 aa4.81□□□□□ -1.64
EDEM3-203ENST00000439962 PGAM1P18669 254 aa4.81□□□□□ -1.64
EDEM3-203ENST00000439962 GRK2P25098 689 aa4.81□□□□□ -1.64
EDEM3-203ENST00000439962 PRDX6P30041 224 aa4.81□□□□□ -1.64
EDEM3-203ENST00000439962 CD70P32970 193 aa4.81□□□□□ -1.64
EDEM3-203ENST00000439962 NOS2P35228 1153 aa4.81□□□□□ -1.64
EDEM3-203ENST00000439962 GARSP41250 739 aaKnown RBP4.81□□□□□ -1.64
EDEM3-203ENST00000439962 CTSOP43234 321 aaPredicted RBP4.81□□□□□ -1.64
EDEM3-203ENST00000439962 HDAC4P56524 1084 aa4.81□□□□□ -1.64
EDEM3-203ENST00000439962 STARD6P59095 220 aa4.81□□□□□ -1.64
EDEM3-203ENST00000439962 RPL26P61254 145 aaKnown RBP4.81□□□□□ -1.64
EDEM3-203ENST00000439962 SLC7A9P82251 487 aa4.81□□□□□ -1.64
EDEM3-203ENST00000439962 PRKCQQ04759 706 aa4.81□□□□□ -1.64
EDEM3-203ENST00000439962 FZD5Q13467 585 aa4.81□□□□□ -1.64
EDEM3-203ENST00000439962 CCINQ13939 588 aa4.81□□□□□ -1.64
EDEM3-203ENST00000439962 SIM2Q14190 667 aaPredicted RBP4.81□□□□□ -1.64
EDEM3-203ENST00000439962 BBS9Q3SYG4 887 aa4.81□□□□□ -1.64
EDEM3-203ENST00000439962 MSS51Q4VC12 460 aa4.81□□□□□ -1.64
EDEM3-203ENST00000439962 FAM133BQ5BKY9 247 aaKnown RBP4.81□□□□□ -1.64
EDEM3-203ENST00000439962 LRRC73Q5JTD7 316 aa4.81□□□□□ -1.64
EDEM3-203ENST00000439962 KCNT1Q5JUK3 1230 aa4.81□□□□□ -1.64
EDEM3-203ENST00000439962 ACBD5Q5T8D3 534 aaPredicted RBP4.81□□□□□ -1.64
EDEM3-203ENST00000439962 BHLHA9Q7RTU4 235 aa4.81□□□□□ -1.64
EDEM3-203ENST00000439962 RALGPS2Q86X27 583 aaPredicted RBP4.81□□□□□ -1.64
EDEM3-203ENST00000439962 RGL4Q8IZJ4 473 aa4.81□□□□□ -1.64
EDEM3-203ENST00000439962 PYROXD2Q8N2H3 581 aa4.81□□□□□ -1.64
EDEM3-203ENST00000439962 MDGA1Q8NFP4 955 aa4.81□□□□□ -1.64
EDEM3-203ENST00000439962 TSTD1Q8NFU3 115 aa4.81□□□□□ -1.64
EDEM3-203ENST00000439962 GIMAP7Q8NHV1 300 aa4.81□□□□□ -1.64
EDEM3-203ENST00000439962 PCDH19Q8TAB3 1148 aa4.81□□□□□ -1.64
EDEM3-203ENST00000439962 TFB1MQ8WVM0 346 aaKnown RBP4.81□□□□□ -1.64
EDEM3-203ENST00000439962 HSPH1Q92598 858 aa4.81□□□□□ -1.64
EDEM3-203ENST00000439962 ZBTB9Q96C00 473 aa4.81□□□□□ -1.64
EDEM3-203ENST00000439962 SIGLEC10Q96LC7 697 aa4.81□□□□□ -1.64
EDEM3-203ENST00000439962 RMDN2Q96LZ7 410 aa4.81□□□□□ -1.64
EDEM3-203ENST00000439962 TKTL2Q9H0I9 626 aa4.81□□□□□ -1.64
EDEM3-203ENST00000439962 DCLRE1BQ9H816 532 aa4.81□□□□□ -1.64
EDEM3-203ENST00000439962 ANLNQ9NQW6 1124 aa4.81□□□□□ -1.64
EDEM3-203ENST00000439962 CNGB3Q9NQW8 809 aa4.81□□□□□ -1.64
EDEM3-203ENST00000439962 PIGVQ9NUD9 493 aa4.81□□□□□ -1.64
EDEM3-203ENST00000439962 KLHL11Q9NVR0 708 aa4.81□□□□□ -1.64
EDEM3-203ENST00000439962 NCDNQ9UBB6 729 aa4.81□□□□□ -1.64
EDEM3-203ENST00000439962 HSFX1Q9UBD0 423 aa4.81□□□□□ -1.64
EDEM3-203ENST00000439962 ZC3H7BQ9UGR2 993 aaKnown RBP4.81□□□□□ -1.64
EDEM3-203ENST00000439962 TRHDEQ9UKU6 1024 aa4.81□□□□□ -1.64
EDEM3-203ENST00000439962 GRID1Q9ULK0 1009 aa4.81□□□□□ -1.64
EDEM3-203ENST00000439962 FZD10Q9ULW2 581 aa4.81□□□□□ -1.64
EDEM3-203ENST00000439962 CYP8B1Q9UNU6 501 aa4.81□□□□□ -1.64
EDEM3-203ENST00000439962 NUP205Q92621 2012 aa4.81□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms