RNA–Protein interactions for RNA: ENST00000438395.5

VPS50-204, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 3

Gene VPS50, Length 538 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-204ENST00000438395 CATSPERBQ9H7T0 1116 aa7.86□□□□□ -1.15
VPS50-204ENST00000438395 PRM3Q9NNZ6 103 aa7.86□□□□□ -1.15
VPS50-204ENST00000438395 SAMSN1Q9NSI8 373 aaKnown RBP7.86□□□□□ -1.15
VPS50-204ENST00000438395 SETXQ7Z333 2677 aaKnown RBP7.86□□□□□ -1.15
VPS50-204ENST00000438395 C2CD4BA6NLJ0 364 aa7.85□□□□□ -1.15
VPS50-204ENST00000438395 LMO7DNF2Z398 122 aa7.85□□□□□ -1.15
VPS50-204ENST00000438395 TOR1BO14657 336 aa7.85□□□□□ -1.15
VPS50-204ENST00000438395 TPP1O14773 563 aa7.85□□□□□ -1.15
VPS50-204ENST00000438395 FGF10O15520 208 aaPredicted RBP7.85□□□□□ -1.15
VPS50-204ENST00000438395 KLK10O43240 276 aa7.85□□□□□ -1.15
VPS50-204ENST00000438395 MMP20O60882 483 aa7.85□□□□□ -1.15
VPS50-204ENST00000438395 ZNF821O75541 412 aaPredicted RBP7.85□□□□□ -1.15
VPS50-204ENST00000438395 TCEA3O75764 348 aa7.85□□□□□ -1.15
VPS50-204ENST00000438395 ALPIP09923 528 aa7.85□□□□□ -1.15
VPS50-204ENST00000438395 MYF5P13349 255 aa7.85□□□□□ -1.15
VPS50-204ENST00000438395 CTSEP14091 401 aa7.85□□□□□ -1.15
VPS50-204ENST00000438395 GKP32189 559 aa7.85□□□□□ -1.15
VPS50-204ENST00000438395 YBEYP58557 167 aaPredicted RBP7.85□□□□□ -1.15
VPS50-204ENST00000438395 TPI1P60174 286 aa7.85□□□□□ -1.15
VPS50-204ENST00000438395 YPEL5P62699 121 aa7.85□□□□□ -1.15
VPS50-204ENST00000438395 FMO1Q01740 532 aa7.85□□□□□ -1.15
VPS50-204ENST00000438395 SPIDRQ14159 915 aa7.85□□□□□ -1.15
VPS50-204ENST00000438395 FGL2Q14314 439 aa7.85□□□□□ -1.15
VPS50-204ENST00000438395 GRM3Q14832 879 aa7.85□□□□□ -1.15
VPS50-204ENST00000438395 KRT31Q15323 416 aa7.85□□□□□ -1.15
VPS50-204ENST00000438395 ISXQ2M1V0 245 aa7.85□□□□□ -1.15
VPS50-204ENST00000438395 PARP15Q460N3 678 aa7.85□□□□□ -1.15
VPS50-204ENST00000438395 CCDC14Q49A88 953 aa7.85□□□□□ -1.15
VPS50-204ENST00000438395 LRRC73Q5JTD7 316 aa7.85□□□□□ -1.15
VPS50-204ENST00000438395 GUSBP11Q6P575 273 aa7.85□□□□□ -1.15
VPS50-204ENST00000438395 DCUN1D2Q6PH85 259 aa7.85□□□□□ -1.15
VPS50-204ENST00000438395 MACC1Q6ZN28 852 aa7.85□□□□□ -1.15
VPS50-204ENST00000438395 NLRP14Q86W24 1093 aa7.85□□□□□ -1.15
VPS50-204ENST00000438395 FSTL5Q8N475 847 aaPredicted RBP7.85□□□□□ -1.15
VPS50-204ENST00000438395 ARL14Q8N4G2 192 aa7.85□□□□□ -1.15
VPS50-204ENST00000438395 CCDC185Q8N715 623 aa7.85□□□□□ -1.15
VPS50-204ENST00000438395 LSM14AQ8ND56 463 aaKnown RBP7.85□□□□□ -1.15
VPS50-204ENST00000438395 C3orf20Q8ND61 904 aa7.85□□□□□ -1.15
VPS50-204ENST00000438395 GTPBP3Q969Y2 492 aaKnown RBP7.85□□□□□ -1.15
VPS50-204ENST00000438395 NTAN1Q96AB6 310 aa7.85□□□□□ -1.15
VPS50-204ENST00000438395 VCPIP1Q96JH7 1222 aa7.85□□□□□ -1.15
VPS50-204ENST00000438395 TTYH3Q9C0H2 523 aa7.85□□□□□ -1.15
VPS50-204ENST00000438395 GANQ9H2C0 597 aa7.85□□□□□ -1.15
VPS50-204ENST00000438395 UBA2Q9UBT2 640 aaPredicted RBP7.85□□□□□ -1.15
VPS50-204ENST00000438395 ZNF212Q9UDV6 495 aa7.85□□□□□ -1.15
VPS50-204ENST00000438395 GGT7Q9UJ14 662 aa7.85□□□□□ -1.15
VPS50-204ENST00000438395 SALL4Q9UJQ4 1053 aa7.85□□□□□ -1.15
VPS50-204ENST00000438395 RAI2Q9Y5P3 530 aa7.85□□□□□ -1.15
VPS50-204ENST00000438395 NYNRINQ9P2P1 1898 aaKnown RBP7.85□□□□□ -1.15
VPS50-204ENST00000438395 TMEM110-MUSTN1A8MSY1 372 aa7.84□□□□□ -1.15
VPS50-204ENST00000438395 RASA4BC9J798 803 aa7.84□□□□□ -1.15
VPS50-204ENST00000438395 FAM72CH0Y354 149 aa7.84□□□□□ -1.15
VPS50-204ENST00000438395 RNF103O00237 685 aa7.84□□□□□ -1.15
VPS50-204ENST00000438395 AREL1O15033 823 aa7.84□□□□□ -1.15
VPS50-204ENST00000438395 DAPK3O43293 454 aa7.84□□□□□ -1.15
VPS50-204ENST00000438395 RASA4O43374 803 aa7.84□□□□□ -1.15
VPS50-204ENST00000438395 KDELR3O43731 214 aa7.84□□□□□ -1.15
VPS50-204ENST00000438395 LZTS3O60299 673 aaPredicted RBP7.84□□□□□ -1.15
VPS50-204ENST00000438395 RASGRP1O95267 797 aa7.84□□□□□ -1.15
VPS50-204ENST00000438395 GJB6O95452 261 aa7.84□□□□□ -1.15
VPS50-204ENST00000438395 PRB1P04280 392 aa7.84□□□□□ -1.15
VPS50-204ENST00000438395 CYP1A1P04798 512 aaPredicted RBP7.84□□□□□ -1.15
VPS50-204ENST00000438395 CDK11BP21127 795 aaKnown RBP7.84□□□□□ -1.15
VPS50-204ENST00000438395 RFC1P35251 1148 aaPredicted RBP7.84□□□□□ -1.15
VPS50-204ENST00000438395 IGFALSP35858 605 aa7.84□□□□□ -1.15
VPS50-204ENST00000438395 EIF4A3P38919 411 aaKnown RBP7.84□□□□□ -1.15
VPS50-204ENST00000438395 ZNF143P52747 638 aaPredicted RBP7.84□□□□□ -1.15
VPS50-204ENST00000438395 AIF1P55008 147 aa7.84□□□□□ -1.15
VPS50-204ENST00000438395 ADKP55263 362 aaKnown RBP7.84□□□□□ -1.15
VPS50-204ENST00000438395 HDAC4P56524 1084 aa7.84□□□□□ -1.15
VPS50-204ENST00000438395 PFN3P60673 137 aa7.84□□□□□ -1.15
VPS50-204ENST00000438395 RHDQ02161 417 aa7.84□□□□□ -1.15
VPS50-204ENST00000438395 UBXN1Q04323 297 aa7.84□□□□□ -1.15
VPS50-204ENST00000438395 C1orf61Q13536 156 aa7.84□□□□□ -1.15
VPS50-204ENST00000438395 LRRC14Q15048 493 aa7.84□□□□□ -1.15
VPS50-204ENST00000438395 IRF4Q15306 451 aa7.84□□□□□ -1.15
VPS50-204ENST00000438395 CLEC16AQ2KHT3 1053 aa7.84□□□□□ -1.15
VPS50-204ENST00000438395 KLHL40Q2TBA0 621 aa7.84□□□□□ -1.15
VPS50-204ENST00000438395 INO80DQ53TQ3 878 aaPredicted RBP7.84□□□□□ -1.15
VPS50-204ENST00000438395 ARHGAP40Q5TG30 622 aa7.84□□□□□ -1.15
VPS50-204ENST00000438395 FAM72AQ5TYM5 149 aa7.84□□□□□ -1.15
VPS50-204ENST00000438395 CDCP2Q5VXM1 449 aa7.84□□□□□ -1.15
VPS50-204ENST00000438395 FAM72DQ6L9T8 149 aa7.84□□□□□ -1.15
VPS50-204ENST00000438395 PPP1R2P3Q6NXS1 205 aa7.84□□□□□ -1.15
VPS50-204ENST00000438395 BRAT1Q6PJG6 821 aa7.84□□□□□ -1.15
VPS50-204ENST00000438395 CRTC1Q6UUV9 634 aa7.84□□□□□ -1.15
VPS50-204ENST00000438395 SASS6Q6UVJ0 657 aa7.84□□□□□ -1.15
VPS50-204ENST00000438395 RD3Q7Z3Z2 195 aa7.84□□□□□ -1.15
VPS50-204ENST00000438395 BNIPLQ7Z465 357 aa7.84□□□□□ -1.15
VPS50-204ENST00000438395 FAM72BQ86X60 149 aa7.84□□□□□ -1.15
VPS50-204ENST00000438395 HID1Q8IV36 788 aa7.84□□□□□ -1.15
VPS50-204ENST00000438395 RBFAQ8N0V3 343 aa7.84□□□□□ -1.15
VPS50-204ENST00000438395 ARL10Q8N8L6 244 aa7.84□□□□□ -1.15
VPS50-204ENST00000438395 PCDH19Q8TAB3 1148 aa7.84□□□□□ -1.15
VPS50-204ENST00000438395 JOSD2Q8TAC2 188 aa7.84□□□□□ -1.15
VPS50-204ENST00000438395 ENOX1Q8TC92 643 aaKnown RBP7.84□□□□□ -1.15
VPS50-204ENST00000438395 HMCESQ96FZ2 354 aa7.84□□□□□ -1.15
VPS50-204ENST00000438395 ATXN7L3BQ96GX2 97 aa7.84□□□□□ -1.15
VPS50-204ENST00000438395 HIC2Q96JB3 615 aa7.84□□□□□ -1.15
VPS50-204ENST00000438395 TBATAQ96M53 351 aa7.84□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms