RNA–Protein interactions for RNA: ENST00000437340.5

CPNE1-216, Transcript of copine 1, humanhuman

TSL 1 (best)

Gene CPNE1, Length 1,755 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-216ENST00000437340 AVPR1AP37288 418 aa25.84■■□□□ 1.73
CPNE1-216ENST00000437340 CYTH1Q15438 398 aa25.84■■□□□ 1.73
CPNE1-216ENST00000437340 CNSTQ6PJW8 725 aa25.84■■□□□ 1.73
CPNE1-216ENST00000437340 Q6ZNB5 142 aa25.84■■□□□ 1.73
CPNE1-216ENST00000437340 OR6P1Q8NGX9 317 aa25.84■■□□□ 1.73
CPNE1-216ENST00000437340 BLOC1S5Q8TDH9 187 aa25.84■■□□□ 1.73
CPNE1-216ENST00000437340 NSL1Q96IY1 281 aa25.84■■□□□ 1.73
CPNE1-216ENST00000437340 OMDQ99983 421 aa25.84■■□□□ 1.73
CPNE1-216ENST00000437340 ACTL7AQ9Y615 435 aa25.84■■□□□ 1.73
CPNE1-216ENST00000437340 TYW5A2RUC4 315 aaKnown RBP25.84■■□□□ 1.73
CPNE1-216ENST00000437340 CBX4O00257 560 aa25.84■■□□□ 1.73
CPNE1-216ENST00000437340 KRT16P08779 473 aa25.84■■□□□ 1.73
CPNE1-216ENST00000437340 PTPN4P29074 926 aa25.84■■□□□ 1.73
CPNE1-216ENST00000437340 ARSDP51689 593 aa25.84■■□□□ 1.73
CPNE1-216ENST00000437340 LIPMQ5VYY2 423 aa25.84■■□□□ 1.73
CPNE1-216ENST00000437340 LRRC8EQ6NSJ5 796 aa25.84■■□□□ 1.73
CPNE1-216ENST00000437340 FAM217AQ8IXS0 508 aa25.84■■□□□ 1.73
CPNE1-216ENST00000437340 GPR150Q8NGU9 434 aa25.84■■□□□ 1.73
CPNE1-216ENST00000437340 ADAMTS19Q8TE59 1207 aa25.84■■□□□ 1.73
CPNE1-216ENST00000437340 GPR78Q96P69 363 aa25.84■■□□□ 1.73
CPNE1-216ENST00000437340 NUDCD1Q96RS6 583 aa25.84■■□□□ 1.73
CPNE1-216ENST00000437340 CYP2S1Q96SQ9 504 aa25.84■■□□□ 1.73
CPNE1-216ENST00000437340 NMUR2Q9GZQ4 415 aa25.84■■□□□ 1.73
CPNE1-216ENST00000437340 SORCS3Q9UPU3 1222 aa25.84■■□□□ 1.73
CPNE1-216ENST00000437340 LCHNA4D1U4 455 aa25.83■■□□□ 1.73
CPNE1-216ENST00000437340 PALM2-AKAP2B1ALY0 433 aaPredicted RBP25.83■■□□□ 1.73
CPNE1-216ENST00000437340 TARM1B6A8C7 271 aa25.83■■□□□ 1.73
CPNE1-216ENST00000437340 SBK3P0C264 359 aa25.83■■□□□ 1.73
CPNE1-216ENST00000437340 HDCP19113 662 aa25.83■■□□□ 1.73
CPNE1-216ENST00000437340 ARRB2P32121 409 aa25.83■■□□□ 1.73
CPNE1-216ENST00000437340 SCNN1BP51168 640 aa25.83■■□□□ 1.73
CPNE1-216ENST00000437340 GALNT3Q14435 633 aa25.83■■□□□ 1.73
CPNE1-216ENST00000437340 PTAR1Q7Z6K3 402 aaPredicted RBP25.83■■□□□ 1.73
CPNE1-216ENST00000437340 ALYREFQ86V81 257 aaKnown RBP25.83■■□□□ 1.73
CPNE1-216ENST00000437340 FSTL5Q8N475 847 aaPredicted RBP25.83■■□□□ 1.73
CPNE1-216ENST00000437340 PHOSPHO2Q8TCD6 241 aa25.83■■□□□ 1.73
CPNE1-216ENST00000437340 SP7Q8TDD2 431 aaPredicted RBP25.83■■□□□ 1.73
CPNE1-216ENST00000437340 PTCD3Q96EY7 689 aaKnown RBP25.83■■□□□ 1.73
CPNE1-216ENST00000437340 SLC22A12Q96S37 553 aa25.83■■□□□ 1.73
CPNE1-216ENST00000437340 RAD9AQ99638 391 aa25.83■■□□□ 1.73
CPNE1-216ENST00000437340 SCUBE2Q9NQ36 999 aa25.83■■□□□ 1.73
CPNE1-216ENST00000437340 CPSF2Q9P2I0 782 aaKnown RBP25.83■■□□□ 1.73
CPNE1-216ENST00000437340 CCDC85CA6NKD9 419 aa25.82■■□□□ 1.72
CPNE1-216ENST00000437340 AURKAO14965 403 aa25.82■■□□□ 1.72
CPNE1-216ENST00000437340 TGM5O43548 720 aa25.82■■□□□ 1.72
CPNE1-216ENST00000437340 TBL1XO60907 577 aa25.82■■□□□ 1.72
CPNE1-216ENST00000437340 RPP40O75818 363 aaKnown RBP25.82■■□□□ 1.72
CPNE1-216ENST00000437340 CNPP09543 421 aaKnown RBP25.82■■□□□ 1.72
CPNE1-216ENST00000437340 CALB2P22676 271 aa25.82■■□□□ 1.72
CPNE1-216ENST00000437340 RGRP47804 291 aa25.82■■□□□ 1.72
CPNE1-216ENST00000437340 TBCCQ15814 346 aa25.82■■□□□ 1.72
CPNE1-216ENST00000437340 ARL14EPQ8N8R7 260 aaPredicted RBP25.82■■□□□ 1.72
CPNE1-216ENST00000437340 CLP1Q92989 425 aaKnown RBP25.82■■□□□ 1.72
CPNE1-216ENST00000437340 SCYL1Q96KG9 808 aa25.82■■□□□ 1.72
CPNE1-216ENST00000437340 ARL8BQ9NVJ2 186 aa25.82■■□□□ 1.72
CPNE1-216ENST00000437340 DNAJC28Q9NX36 388 aa25.82■■□□□ 1.72
CPNE1-216ENST00000437340 CORO1CQ9ULV4 474 aaPredicted RBP25.82■■□□□ 1.72
CPNE1-216ENST00000437340 CPQQ9Y646 472 aa25.82■■□□□ 1.72
CPNE1-216ENST00000437340 H0Y626 953 aa25.82■■□□□ 1.72
CPNE1-216ENST00000437340 TK2O00142 265 aa25.82■■□□□ 1.72
CPNE1-216ENST00000437340 TLL1O43897 1013 aa25.82■■□□□ 1.72
CPNE1-216ENST00000437340 CRTAMO95727 393 aa25.82■■□□□ 1.72
CPNE1-216ENST00000437340 S1PR4O95977 384 aa25.82■■□□□ 1.72
CPNE1-216ENST00000437340 SERPINA6P08185 405 aa25.82■■□□□ 1.72
CPNE1-216ENST00000437340 HOXB8P17481 243 aaPredicted RBP25.82■■□□□ 1.72
CPNE1-216ENST00000437340 ARF5P84085 180 aa25.82■■□□□ 1.72
CPNE1-216ENST00000437340 SNCBQ16143 134 aa25.82■■□□□ 1.72
CPNE1-216ENST00000437340 INO80DQ53TQ3 878 aaPredicted RBP25.82■■□□□ 1.72
CPNE1-216ENST00000437340 TXNDC8Q6A555 127 aa25.82■■□□□ 1.72
CPNE1-216ENST00000437340 NAPRTQ6XQN6 538 aa25.82■■□□□ 1.72
CPNE1-216ENST00000437340 MRPS31Q92665 395 aaKnown RBP25.82■■□□□ 1.72
CPNE1-216ENST00000437340 TMA16Q96EY4 203 aaKnown RBP25.82■■□□□ 1.72
CPNE1-216ENST00000437340 MRPL57Q9BQC6 102 aaKnown RBP25.82■■□□□ 1.72
CPNE1-216ENST00000437340 GATA5Q9BWX5 397 aaPredicted RBP25.82■■□□□ 1.72
CPNE1-216ENST00000437340 TDRD1Q9BXT4 1180 aaKnown RBP25.82■■□□□ 1.72
CPNE1-216ENST00000437340 MRPL46Q9H2W6 279 aaKnown RBP25.82■■□□□ 1.72
CPNE1-216ENST00000437340 KCTD3Q9Y597 815 aa25.82■■□□□ 1.72
CPNE1-216ENST00000437340 ARL5AQ9Y689 179 aa25.82■■□□□ 1.72
CPNE1-216ENST00000437340 ZMPSTE24O75844 475 aa25.81■■□□□ 1.72
CPNE1-216ENST00000437340 HSPA4LO95757 839 aa25.81■■□□□ 1.72
CPNE1-216ENST00000437340 GLP2RO95838 553 aa25.81■■□□□ 1.72
CPNE1-216ENST00000437340 MYL4P12829 197 aa25.81■■□□□ 1.72
CPNE1-216ENST00000437340 NUMBP49757 651 aa25.81■■□□□ 1.72
CPNE1-216ENST00000437340 SLC20A2Q08357 652 aa25.81■■□□□ 1.72
CPNE1-216ENST00000437340 ASPHQ12797 758 aa25.81■■□□□ 1.72
CPNE1-216ENST00000437340 ZNF789Q5FWF6 425 aa25.81■■□□□ 1.72
CPNE1-216ENST00000437340 RBM20Q5T481 1227 aaKnown RBP25.81■■□□□ 1.72
CPNE1-216ENST00000437340 MRNIPQ6NTE8 343 aa25.81■■□□□ 1.72
CPNE1-216ENST00000437340 ATG14Q6ZNE5 492 aa25.81■■□□□ 1.72
CPNE1-216ENST00000437340 CCDC149Q6ZUS6 474 aa25.81■■□□□ 1.72
CPNE1-216ENST00000437340 TTC8Q8TAM2 541 aa25.81■■□□□ 1.72
CPNE1-216ENST00000437340 NXNL1Q96CM4 212 aa25.81■■□□□ 1.72
CPNE1-216ENST00000437340 TBATAQ96M53 351 aa25.81■■□□□ 1.72
CPNE1-216ENST00000437340 RILPQ96NA2 401 aa25.81■■□□□ 1.72
CPNE1-216ENST00000437340 MTIF3Q9H2K0 278 aaKnown RBP25.81■■□□□ 1.72
CPNE1-216ENST00000437340 TLE6Q9H808 572 aa25.81■■□□□ 1.72
CPNE1-216ENST00000437340 ZNF510Q9Y2H8 683 aa25.81■■□□□ 1.72
CPNE1-216ENST00000437340 LUC7L3O95232 432 aaKnown RBP25.8■■□□□ 1.72
CPNE1-216ENST00000437340 LRG1P02750 347 aa25.8■■□□□ 1.72
CPNE1-216ENST00000437340 GABRR2P28476 465 aa25.8■■□□□ 1.72
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms