RNA–Protein interactions for RNA: ENST00000437242.1

HMGB1P31-201, Transcript of high mobility group box 1 pseudogene 31, humanhuman

BASIC

Gene HMGB1P31, Length 427 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P31-201ENST00000437242 FUT6P51993 359 aa3.23□□□□□ -1.89
HMGB1P31-201ENST00000437242 MVDP53602 400 aa3.23□□□□□ -1.89
HMGB1P31-201ENST00000437242 ARHGAP8P85298 464 aa3.23□□□□□ -1.89
HMGB1P31-201ENST00000437242 SLC18A2Q05940 514 aa3.23□□□□□ -1.89
HMGB1P31-201ENST00000437242 PRDM2Q13029 1718 aa3.23□□□□□ -1.89
HMGB1P31-201ENST00000437242 PDCD2Q16342 344 aaPredicted RBP3.23□□□□□ -1.89
HMGB1P31-201ENST00000437242 RPE65Q16518 533 aa3.23□□□□□ -1.89
HMGB1P31-201ENST00000437242 ATP13A5Q4VNC0 1218 aa3.23□□□□□ -1.89
HMGB1P31-201ENST00000437242 ERCC6L2Q5T890 1561 aa3.23□□□□□ -1.89
HMGB1P31-201ENST00000437242 ZC3HC1Q86WB0 502 aaKnown RBP3.23□□□□□ -1.89
HMGB1P31-201ENST00000437242 CCDC117Q8IWD4 279 aaPredicted RBP3.23□□□□□ -1.89
HMGB1P31-201ENST00000437242 ZNF527Q8NB42 609 aa3.23□□□□□ -1.89
HMGB1P31-201ENST00000437242 VPS37AQ8NEZ2 397 aa3.23□□□□□ -1.89
HMGB1P31-201ENST00000437242 ZMIZ2Q8NF64 920 aa3.23□□□□□ -1.89
HMGB1P31-201ENST00000437242 DMBX1Q8NFW5 382 aa3.23□□□□□ -1.89
HMGB1P31-201ENST00000437242 CREB3L4Q8TEY5 395 aa3.23□□□□□ -1.89
HMGB1P31-201ENST00000437242 POF1BQ8WVV4 589 aa3.23□□□□□ -1.89
HMGB1P31-201ENST00000437242 OTULINQ96BN8 352 aa3.23□□□□□ -1.89
HMGB1P31-201ENST00000437242 YME1L1Q96TA2 773 aa3.23□□□□□ -1.89
HMGB1P31-201ENST00000437242 SPATS2LQ9NUQ6 558 aaKnown RBP3.23□□□□□ -1.89
HMGB1P31-201ENST00000437242 ANKRD10Q9NXR5 420 aa3.23□□□□□ -1.89
HMGB1P31-201ENST00000437242 TAAR2Q9P1P5 351 aa3.23□□□□□ -1.89
HMGB1P31-201ENST00000437242 CDC23Q9UJX2 597 aa3.23□□□□□ -1.89
HMGB1P31-201ENST00000437242 KCND3Q9UK17 655 aa3.23□□□□□ -1.89
HMGB1P31-201ENST00000437242 ZNF711Q9Y462 761 aa3.23□□□□□ -1.89
HMGB1P31-201ENST00000437242 CGNL1Q0VF96 1302 aa3.22□□□□□ -1.89
HMGB1P31-201ENST00000437242 hCG_1642624A0A1W2PR95 340 aa3.22□□□□□ -1.89
HMGB1P31-201ENST00000437242 SEPT4O43236 478 aa3.22□□□□□ -1.89
HMGB1P31-201ENST00000437242 HSPA12AO43301 675 aa3.22□□□□□ -1.89
HMGB1P31-201ENST00000437242 PNPLA4P41247 253 aa3.22□□□□□ -1.89
HMGB1P31-201ENST00000437242 CENPAP49450 140 aa3.22□□□□□ -1.89
HMGB1P31-201ENST00000437242 NR0B1P51843 470 aaKnown RBP3.22□□□□□ -1.89
HMGB1P31-201ENST00000437242 HDAC4P56524 1084 aa3.22□□□□□ -1.89
HMGB1P31-201ENST00000437242 THOC5Q13769 683 aaKnown RBP3.22□□□□□ -1.89
HMGB1P31-201ENST00000437242 BLMHQ13867 455 aa3.22□□□□□ -1.89
HMGB1P31-201ENST00000437242 PUM3Q15397 648 aaKnown RBP3.22□□□□□ -1.89
HMGB1P31-201ENST00000437242 RRAGAQ7L523 313 aa3.22□□□□□ -1.89
HMGB1P31-201ENST00000437242 GHDCQ8N2G8 530 aa3.22□□□□□ -1.89
HMGB1P31-201ENST00000437242 TAS1R2Q8TE23 839 aa3.22□□□□□ -1.89
HMGB1P31-201ENST00000437242 ANKRD9Q96BM1 317 aaPredicted RBP3.22□□□□□ -1.89
HMGB1P31-201ENST00000437242 TTC14Q96N46 770 aa3.22□□□□□ -1.89
HMGB1P31-201ENST00000437242 MOV10L1Q9BXT6 1211 aaKnown RBP3.22□□□□□ -1.89
HMGB1P31-201ENST00000437242 PABPC3Q9H361 631 aaKnown RBP3.22□□□□□ -1.89
HMGB1P31-201ENST00000437242 IFT80Q9P2H3 777 aaPredicted RBP3.22□□□□□ -1.89
HMGB1P31-201ENST00000437242 KCNS2Q9ULS6 477 aa3.22□□□□□ -1.89
HMGB1P31-201ENST00000437242 CLDN16Q9Y5I7 305 aa3.22□□□□□ -1.89
HMGB1P31-201ENST00000437242 SMAD5-AS1Q9Y6J3 95 aa3.22□□□□□ -1.89
HMGB1P31-201ENST00000437242 CLASP1Q7Z460 1538 aa3.22□□□□□ -1.89
HMGB1P31-201ENST00000437242 A0A1W2PS18 150 aa3.21□□□□□ -1.9
HMGB1P31-201ENST00000437242 FAM90A20PA6NIJ5 464 aa3.21□□□□□ -1.9
HMGB1P31-201ENST00000437242 ZNF587BE7ETH6 402 aa3.21□□□□□ -1.9
HMGB1P31-201ENST00000437242 SYT5O00445 386 aa3.21□□□□□ -1.9
HMGB1P31-201ENST00000437242 MID1O15344 667 aa3.21□□□□□ -1.9
HMGB1P31-201ENST00000437242 ZIC3O60481 467 aa3.21□□□□□ -1.9
HMGB1P31-201ENST00000437242 SERPINC1P01008 464 aa3.21□□□□□ -1.9
HMGB1P31-201ENST00000437242 PRSS1P07477 247 aa3.21□□□□□ -1.9
HMGB1P31-201ENST00000437242 PIGAP37287 484 aa3.21□□□□□ -1.9
HMGB1P31-201ENST00000437242 TRAPPC10P48553 1259 aa3.21□□□□□ -1.9
HMGB1P31-201ENST00000437242 PNLIPRP1P54315 467 aa3.21□□□□□ -1.9
HMGB1P31-201ENST00000437242 ARSFP54793 590 aa3.21□□□□□ -1.9
HMGB1P31-201ENST00000437242 LINC01547P58512 204 aaPredicted RBP3.21□□□□□ -1.9
HMGB1P31-201ENST00000437242 BRWD1-AS2P59051 145 aa3.21□□□□□ -1.9
HMGB1P31-201ENST00000437242 SREBF2Q12772 1141 aa3.21□□□□□ -1.9
HMGB1P31-201ENST00000437242 FOXO1Q12778 655 aa3.21□□□□□ -1.9
HMGB1P31-201ENST00000437242 DHX8Q14562 1220 aaKnown RBP3.21□□□□□ -1.9
HMGB1P31-201ENST00000437242 ZRSR2Q15696 482 aaKnown RBP3.21□□□□□ -1.9
HMGB1P31-201ENST00000437242 SLC1A5Q15758 541 aa3.21□□□□□ -1.9
HMGB1P31-201ENST00000437242 TMEM30BQ3MIR4 351 aa3.21□□□□□ -1.9
HMGB1P31-201ENST00000437242 AMZ1Q400G9 498 aa3.21□□□□□ -1.9
HMGB1P31-201ENST00000437242 IRAK1BP1Q5VVH5 260 aa3.21□□□□□ -1.9
HMGB1P31-201ENST00000437242 ARHGAP11AQ6P4F7 1023 aa3.21□□□□□ -1.9
HMGB1P31-201ENST00000437242 GGT6Q6P531 493 aa3.21□□□□□ -1.9
HMGB1P31-201ENST00000437242 CCNI2Q6ZMN8 369 aaPredicted RBP3.21□□□□□ -1.9
HMGB1P31-201ENST00000437242 KRTAP7-1Q8IUC3 87 aa3.21□□□□□ -1.9
HMGB1P31-201ENST00000437242 METTL27Q8N6F8 245 aaPredicted RBP3.21□□□□□ -1.9
HMGB1P31-201ENST00000437242 CNBD1Q8NA66 436 aa3.21□□□□□ -1.9
HMGB1P31-201ENST00000437242 SETD9Q8NE22 299 aa3.21□□□□□ -1.9
HMGB1P31-201ENST00000437242 TRAPPC9Q96Q05 1148 aa3.21□□□□□ -1.9
HMGB1P31-201ENST00000437242 HERPUD2Q9BSE4 406 aa3.21□□□□□ -1.9
HMGB1P31-201ENST00000437242 PLEKHA2Q9HB19 425 aa3.21□□□□□ -1.9
HMGB1P31-201ENST00000437242 ENTPD7Q9NQZ7 604 aa3.21□□□□□ -1.9
HMGB1P31-201ENST00000437242 TARBP1Q13395 1621 aaKnown RBP3.21□□□□□ -1.9
HMGB1P31-201ENST00000437242 CAPN9O14815 690 aa3.2□□□□□ -1.9
HMGB1P31-201ENST00000437242 WNT9BO14905 357 aa3.2□□□□□ -1.9
HMGB1P31-201ENST00000437242 ATP2C2O75185 946 aa3.2□□□□□ -1.9
HMGB1P31-201ENST00000437242 ADAP00813 363 aa3.2□□□□□ -1.9
HMGB1P31-201ENST00000437242 CSTBP04080 98 aaKnown RBP3.2□□□□□ -1.9
HMGB1P31-201ENST00000437242 CSF1P09603 554 aa3.2□□□□□ -1.9
HMGB1P31-201ENST00000437242 ALDH4A1P30038 563 aa3.2□□□□□ -1.9
HMGB1P31-201ENST00000437242 PDIA3P30101 505 aaKnown RBP3.2□□□□□ -1.9
HMGB1P31-201ENST00000437242 TTKP33981 857 aa3.2□□□□□ -1.9
HMGB1P31-201ENST00000437242 GRK6P43250 576 aa3.2□□□□□ -1.9
HMGB1P31-201ENST00000437242 FMO5P49326 533 aa3.2□□□□□ -1.9
HMGB1P31-201ENST00000437242 GOLGA8FQ08AF8 430 aa3.2□□□□□ -1.9
HMGB1P31-201ENST00000437242 SYT13Q7L8C5 426 aa3.2□□□□□ -1.9
HMGB1P31-201ENST00000437242 SATL1Q86VE3 508 aa3.2□□□□□ -1.9
HMGB1P31-201ENST00000437242 CACNA2D3Q8IZS8 1091 aa3.2□□□□□ -1.9
HMGB1P31-201ENST00000437242 NKAPQ8N5F7 415 aaKnown RBP3.2□□□□□ -1.9
HMGB1P31-201ENST00000437242 SPATA5Q8NB90 893 aa3.2□□□□□ -1.9
HMGB1P31-201ENST00000437242 DNAAF1Q8NEP3 725 aa3.2□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms