RNA–Protein interactions for RNA: ENST00000436724.5

PTPRF-207, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 1 (best)

Gene PTPRF, Length 2,168 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-207ENST00000436724 HLA-FP30511 346 aa21.25■□□□□ 0.99
PTPRF-207ENST00000436724 NRIP1P48552 1158 aa21.25■□□□□ 0.99
PTPRF-207ENST00000436724 SERPINB4P48594 390 aa21.25■□□□□ 0.99
PTPRF-207ENST00000436724 TRAF2Q12933 501 aa21.25■□□□□ 0.99
PTPRF-207ENST00000436724 PLEKHG6Q3KR16 790 aa21.25■□□□□ 0.99
PTPRF-207ENST00000436724 NEPROQ6NW34 567 aa21.25■□□□□ 0.99
PTPRF-207ENST00000436724 PTAR1Q7Z6K3 402 aaPredicted RBP21.25■□□□□ 0.99
PTPRF-207ENST00000436724 ACMSDQ8TDX5 336 aa21.25■□□□□ 0.99
PTPRF-207ENST00000436724 GDPD5Q8WTR4 605 aa21.25■□□□□ 0.99
PTPRF-207ENST00000436724 HDAC10Q969S8 669 aa21.25■□□□□ 0.99
PTPRF-207ENST00000436724 RPL10LQ96L21 214 aaKnown RBP21.25■□□□□ 0.99
PTPRF-207ENST00000436724 PITPNM3Q9BZ71 974 aa21.25■□□□□ 0.99
PTPRF-207ENST00000436724 SUDS3Q9H7L9 328 aaPredicted RBP21.25■□□□□ 0.99
PTPRF-207ENST00000436724 TLE6Q9H808 572 aa21.25■□□□□ 0.99
PTPRF-207ENST00000436724 ABCF3Q9NUQ8 709 aa21.25■□□□□ 0.99
PTPRF-207ENST00000436724 ZNF358Q9NW07 568 aa21.25■□□□□ 0.99
PTPRF-207ENST00000436724 KIAA1522Q9P206 1035 aaPredicted RBP21.25■□□□□ 0.99
PTPRF-207ENST00000436724 SLC39A10Q9ULF5 831 aa21.25■□□□□ 0.99
PTPRF-207ENST00000436724 NEDD8-MDP1E9PL57 170 aa21.24■□□□□ 0.99
PTPRF-207ENST00000436724 GSTA1P08263 222 aa21.24■□□□□ 0.99
PTPRF-207ENST00000436724 CYB5D1Q6P9G0 228 aa21.24■□□□□ 0.99
PTPRF-207ENST00000436724 LPCAT1Q8NF37 534 aa21.24■□□□□ 0.99
PTPRF-207ENST00000436724 OR13C4Q8NGS5 318 aa21.24■□□□□ 0.99
PTPRF-207ENST00000436724 SAMD11Q96NU1 681 aa21.24■□□□□ 0.99
PTPRF-207ENST00000436724 PIDD1Q9HB75 910 aa21.24■□□□□ 0.99
PTPRF-207ENST00000436724 MRPS23Q9Y3D9 190 aaKnown RBP21.24■□□□□ 0.99
PTPRF-207ENST00000436724 TIMM44O43615 452 aa21.24■□□□□ 0.99
PTPRF-207ENST00000436724 PAPSS2O95340 614 aaPredicted RBP21.24■□□□□ 0.99
PTPRF-207ENST00000436724 SLC8A1P32418 973 aa21.24■□□□□ 0.99
PTPRF-207ENST00000436724 CTSOP43234 321 aaPredicted RBP21.24■□□□□ 0.99
PTPRF-207ENST00000436724 MNAT1P51948 309 aa21.24■□□□□ 0.99
PTPRF-207ENST00000436724 ZNF77Q15935 545 aa21.24■□□□□ 0.99
PTPRF-207ENST00000436724 ZNF789Q5FWF6 425 aa21.24■□□□□ 0.99
PTPRF-207ENST00000436724 RNF43Q68DV7 783 aa21.24■□□□□ 0.99
PTPRF-207ENST00000436724 ASTLQ6HA08 431 aaPredicted RBP21.24■□□□□ 0.99
PTPRF-207ENST00000436724 PDE12Q6L8Q7 609 aaKnown RBP21.24■□□□□ 0.99
PTPRF-207ENST00000436724 NCEH1Q6PIU2 408 aa21.24■□□□□ 0.99
PTPRF-207ENST00000436724 RGS9BPQ6ZS82 235 aa21.24■□□□□ 0.99
PTPRF-207ENST00000436724 LDB1Q86U70 411 aaPredicted RBP21.24■□□□□ 0.99
PTPRF-207ENST00000436724 LEMD2Q8NC56 503 aa21.24■□□□□ 0.99
PTPRF-207ENST00000436724 OR6P1Q8NGX9 317 aa21.24■□□□□ 0.99
PTPRF-207ENST00000436724 THOC1Q96FV9 657 aaKnown RBP21.24■□□□□ 0.99
PTPRF-207ENST00000436724 DNAJC1Q96KC8 554 aaKnown RBP21.24■□□□□ 0.99
PTPRF-207ENST00000436724 TBATAQ96M53 351 aa21.24■□□□□ 0.99
PTPRF-207ENST00000436724 NKX2-4Q9H2Z4 354 aa21.24■□□□□ 0.99
PTPRF-207ENST00000436724 RHOJQ9H4E5 214 aa21.24■□□□□ 0.99
PTPRF-207ENST00000436724 NSMCE4AQ9NXX6 385 aa21.24■□□□□ 0.99
PTPRF-207ENST00000436724 EMCNQ9ULC0 261 aa21.24■□□□□ 0.99
PTPRF-207ENST00000436724 WNT6Q9Y6F9 365 aa21.24■□□□□ 0.99
PTPRF-207ENST00000436724 A0A0U1RQS6 177 aa21.23■□□□□ 0.99
PTPRF-207ENST00000436724 HAUS5O94927 633 aa21.23■□□□□ 0.99
PTPRF-207ENST00000436724 BGNP21810 368 aa21.23■□□□□ 0.99
PTPRF-207ENST00000436724 MAGEA12P43365 314 aa21.23■□□□□ 0.99
PTPRF-207ENST00000436724 SERPINB8P50452 374 aa21.23■□□□□ 0.99
PTPRF-207ENST00000436724 IRF9Q00978 393 aa21.23■□□□□ 0.99
PTPRF-207ENST00000436724 SWT1Q5T5J6 900 aaKnown RBP21.23■□□□□ 0.99
PTPRF-207ENST00000436724 RETSATQ6NUM9 610 aa21.23■□□□□ 0.99
PTPRF-207ENST00000436724 MFSD6LQ8IWD5 586 aa21.23■□□□□ 0.99
PTPRF-207ENST00000436724 PLD6Q8N2A8 252 aaKnown RBP21.23■□□□□ 0.99
PTPRF-207ENST00000436724 C2CD4AQ8NCU7 369 aaPredicted RBP21.23■□□□□ 0.99
PTPRF-207ENST00000436724 BRSK1Q8TDC3 778 aa21.23■□□□□ 0.99
PTPRF-207ENST00000436724 SMG7Q92540 1137 aaKnown RBP21.23■□□□□ 0.99
PTPRF-207ENST00000436724 ISL2Q96A47 359 aa21.23■□□□□ 0.99
PTPRF-207ENST00000436724 BBS2Q9BXC9 721 aa21.23■□□□□ 0.99
PTPRF-207ENST00000436724 FBXO6Q9NRD1 293 aaPredicted RBP21.23■□□□□ 0.99
PTPRF-207ENST00000436724 FBXO5Q9UKT4 447 aa21.23■□□□□ 0.99
PTPRF-207ENST00000436724 PHTF1Q9UMS5 762 aa21.23■□□□□ 0.99
PTPRF-207ENST00000436724 EPOPA6NHQ4 379 aa21.23■□□□□ 0.99
PTPRF-207ENST00000436724 SIN3BO75182 1162 aa21.23■□□□□ 0.99
PTPRF-207ENST00000436724 SLC4A1P02730 911 aa21.23■□□□□ 0.99
PTPRF-207ENST00000436724 STK19P49842 368 aaPredicted RBP21.23■□□□□ 0.99
PTPRF-207ENST00000436724 NSUN2Q08J23 767 aaKnown RBP eCLIP21.23■□□□□ 0.99
PTPRF-207ENST00000436724 SLC14A2Q15849 920 aa21.23■□□□□ 0.99
PTPRF-207ENST00000436724 N4BP2L1Q5TBK1 243 aaPredicted RBP21.23■□□□□ 0.99
PTPRF-207ENST00000436724 VN1R2Q8NFZ6 395 aa21.23■□□□□ 0.99
PTPRF-207ENST00000436724 ACDQ96AP0 544 aa21.23■□□□□ 0.99
PTPRF-207ENST00000436724 LMLNQ96KR4 655 aa21.23■□□□□ 0.99
PTPRF-207ENST00000436724 LRRC3BQ96PB8 259 aa21.23■□□□□ 0.99
PTPRF-207ENST00000436724 GPR22Q99680 433 aa21.23■□□□□ 0.99
PTPRF-207ENST00000436724 MANSC1Q9H8J5 431 aa21.23■□□□□ 0.99
PTPRF-207ENST00000436724 GKP32189 559 aa21.22■□□□□ 0.99
PTPRF-207ENST00000436724 PRAMEP78395 509 aa21.22■□□□□ 0.99
PTPRF-207ENST00000436724 SPNS2Q8IVW8 549 aa21.22■□□□□ 0.99
PTPRF-207ENST00000436724 ST13P5Q8NFI4 369 aaPredicted RBP21.22■□□□□ 0.99
PTPRF-207ENST00000436724 MDGA1Q8NFP4 955 aa21.22■□□□□ 0.99
PTPRF-207ENST00000436724 FAM167BQ9BTA0 163 aa21.22■□□□□ 0.99
PTPRF-207ENST00000436724 TNKS2Q9H2K2 1166 aa21.22■□□□□ 0.99
PTPRF-207ENST00000436724 MARCH4Q9P2E8 410 aaPredicted RBP21.22■□□□□ 0.99
PTPRF-207ENST00000436724 CDH22Q9UJ99 828 aa21.22■□□□□ 0.99
PTPRF-207ENST00000436724 ARIH1Q9Y4X5 557 aaPredicted RBP21.22■□□□□ 0.99
PTPRF-207ENST00000436724 A0A096LPK6 155 aa21.21■□□□□ 0.99
PTPRF-207ENST00000436724 NEFHP12036 1026 aa21.21■□□□□ 0.99
PTPRF-207ENST00000436724 CES1P23141 567 aa21.21■□□□□ 0.99
PTPRF-207ENST00000436724 PITRM1Q5JRX3 1037 aa21.21■□□□□ 0.99
PTPRF-207ENST00000436724 LY6G5CQ5SRR4 150 aa21.21■□□□□ 0.99
PTPRF-207ENST00000436724 CNSTQ6PJW8 725 aa21.21■□□□□ 0.99
PTPRF-207ENST00000436724 SLC41A1Q8IVJ1 513 aa21.21■□□□□ 0.99
PTPRF-207ENST00000436724 PARP9Q8IXQ6 854 aa21.21■□□□□ 0.99
PTPRF-207ENST00000436724 IRF7Q92985 503 aa21.21■□□□□ 0.99
PTPRF-207ENST00000436724 TMEM216Q9P0N5 145 aa21.21■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms