RNA–Protein interactions for RNA: ENST00000434813.3

CLK1-205, Transcript of CDC like kinase 1, humanhuman

TSL 2 BASIC

Gene CLK1, Length 2,026 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-205ENST00000434813 MAGEA13PA6NCF6 341 aa18.71■□□□□ 0.59
CLK1-205ENST00000434813 TADA2AO75478 443 aa18.71■□□□□ 0.59
CLK1-205ENST00000434813 LTA4HP09960 611 aaKnown RBP18.71■□□□□ 0.59
CLK1-205ENST00000434813 SP100P23497 879 aaPredicted RBP18.71■□□□□ 0.59
CLK1-205ENST00000434813 FAM189BP81408 668 aa18.71■□□□□ 0.59
CLK1-205ENST00000434813 SH2D4BQ5SQS7 431 aa18.71■□□□□ 0.59
CLK1-205ENST00000434813 TMEM198Q66K66 360 aa18.71■□□□□ 0.59
CLK1-205ENST00000434813 SLC43A3Q8NBI5 491 aa18.71■□□□□ 0.59
CLK1-205ENST00000434813 SGF29Q96ES7 293 aa18.71■□□□□ 0.59
CLK1-205ENST00000434813 MFSD1Q9H3U5 465 aa18.71■□□□□ 0.59
CLK1-205ENST00000434813 OLA1Q9NTK5 396 aaKnown RBP18.71■□□□□ 0.59
CLK1-205ENST00000434813 SCOCQ9UIL1 159 aa18.71■□□□□ 0.59
CLK1-205ENST00000434813 VWA8A3KMH1 1905 aa18.7■□□□□ 0.58
CLK1-205ENST00000434813 TMEM233B4DJY2 109 aa18.7■□□□□ 0.58
CLK1-205ENST00000434813 SKAP2O75563 359 aaPredicted RBP18.7■□□□□ 0.58
CLK1-205ENST00000434813 HSPA1AP0DMV8 641 aaKnown RBP18.7■□□□□ 0.58
CLK1-205ENST00000434813 HSPA1BP0DMV9 641 aaKnown RBP18.7■□□□□ 0.58
CLK1-205ENST00000434813 XIAPP98170 497 aa18.7■□□□□ 0.58
CLK1-205ENST00000434813 IL10RBQ08334 325 aa18.7■□□□□ 0.58
CLK1-205ENST00000434813 IHHQ14623 411 aa18.7■□□□□ 0.58
CLK1-205ENST00000434813 NXNQ6DKJ4 435 aa18.7■□□□□ 0.58
CLK1-205ENST00000434813 FBXL22Q6P050 247 aa18.7■□□□□ 0.58
CLK1-205ENST00000434813 KLC3Q6P597 504 aa18.7■□□□□ 0.58
CLK1-205ENST00000434813 DSELQ8IZU8 1212 aa18.7■□□□□ 0.58
CLK1-205ENST00000434813 EFCAB3Q8N7B9 438 aa18.7■□□□□ 0.58
CLK1-205ENST00000434813 ARRDC2Q8TBH0 407 aa18.7■□□□□ 0.58
CLK1-205ENST00000434813 IGSF8Q969P0 613 aa18.7■□□□□ 0.58
CLK1-205ENST00000434813 FAR2Q96K12 515 aa18.7■□□□□ 0.58
CLK1-205ENST00000434813 UBXN10Q96LJ8 280 aa18.7■□□□□ 0.58
CLK1-205ENST00000434813 XRN2Q9H0D6 950 aaKnown RBP eCLIP18.7■□□□□ 0.58
CLK1-205ENST00000434813 MTPAPQ9NVV4 582 aaKnown RBP eCLIP18.7■□□□□ 0.58
CLK1-205ENST00000434813 COPG1Q9Y678 874 aaKnown RBP18.7■□□□□ 0.58
CLK1-205ENST00000434813 DRGXA6NNA5 263 aa18.69■□□□□ 0.58
CLK1-205ENST00000434813 A8MT66 165 aa18.69■□□□□ 0.58
CLK1-205ENST00000434813 ARVCFO00192 962 aa18.69■□□□□ 0.58
CLK1-205ENST00000434813 SDHDO14521 159 aa18.69■□□□□ 0.58
CLK1-205ENST00000434813 IPO13O94829 963 aaKnown RBP18.69■□□□□ 0.58
CLK1-205ENST00000434813 WISP3O95389 354 aaPredicted RBP18.69■□□□□ 0.58
CLK1-205ENST00000434813 IGLV3-27P01718 113 aa18.69■□□□□ 0.58
CLK1-205ENST00000434813 RBP1P09455 135 aa18.69■□□□□ 0.58
CLK1-205ENST00000434813 ATXN1LP0C7T5 689 aaKnown RBP18.69■□□□□ 0.58
CLK1-205ENST00000434813 YWHAQP27348 245 aa18.69■□□□□ 0.58
CLK1-205ENST00000434813 SULT2A1Q06520 285 aa18.69■□□□□ 0.58
CLK1-205ENST00000434813 MBTPS1Q14703 1052 aa18.69■□□□□ 0.58
CLK1-205ENST00000434813 PARP15Q460N3 678 aa18.69■□□□□ 0.58
CLK1-205ENST00000434813 SIRPB2Q5JXA9 342 aa18.69■□□□□ 0.58
CLK1-205ENST00000434813 ACBD5Q5T8D3 534 aaPredicted RBP18.69■□□□□ 0.58
CLK1-205ENST00000434813 HECTD2Q5U5R9 776 aa18.69■□□□□ 0.58
CLK1-205ENST00000434813 RAP1GAP2Q684P5 730 aa18.69■□□□□ 0.58
CLK1-205ENST00000434813 BNC2Q6ZN30 1099 aaPredicted RBP18.69■□□□□ 0.58
CLK1-205ENST00000434813 PDSS2Q86YH6 399 aa18.69■□□□□ 0.58
CLK1-205ENST00000434813 PGAM4Q8N0Y7 254 aa18.69■□□□□ 0.58
CLK1-205ENST00000434813 TTC9BQ8N6N2 239 aa18.69■□□□□ 0.58
CLK1-205ENST00000434813 FBXO32Q969P5 355 aa18.69■□□□□ 0.58
CLK1-205ENST00000434813 RCN3Q96D15 328 aa18.69■□□□□ 0.58
CLK1-205ENST00000434813 DLGAP2Q9P1A6 1054 aa18.69■□□□□ 0.58
CLK1-205ENST00000434813 ADAMTS6Q9UKP5 1117 aa18.69■□□□□ 0.58
CLK1-205ENST00000434813 G3BP2Q9UN86 482 aaKnown RBP18.69■□□□□ 0.58
CLK1-205ENST00000434813 LOC285095A0A1B0GVY8 99 aa18.69■□□□□ 0.58
CLK1-205ENST00000434813 NEMP2A6NFY4 417 aa18.69■□□□□ 0.58
CLK1-205ENST00000434813 H3BNX3 289 aa18.69■□□□□ 0.58
CLK1-205ENST00000434813 CASQ2O14958 399 aaPredicted RBP18.69■□□□□ 0.58
CLK1-205ENST00000434813 RAMP2O60895 175 aa18.69■□□□□ 0.58
CLK1-205ENST00000434813 RAG1P15918 1043 aa18.69■□□□□ 0.58
CLK1-205ENST00000434813 RFTN1Q14699 578 aaPredicted RBP18.69■□□□□ 0.58
CLK1-205ENST00000434813 ACAP2Q15057 778 aa18.69■□□□□ 0.58
CLK1-205ENST00000434813 CTXN3Q4LDR2 81 aa18.69■□□□□ 0.58
CLK1-205ENST00000434813 PELI3Q8N2H9 469 aa18.69■□□□□ 0.58
CLK1-205ENST00000434813 PGBD5Q8N414 524 aa18.69■□□□□ 0.58
CLK1-205ENST00000434813 MRGBPQ9NV56 204 aa18.69■□□□□ 0.58
CLK1-205ENST00000434813 GTSE1Q9NYZ3 720 aa18.69■□□□□ 0.58
CLK1-205ENST00000434813 MARCH2Q9P0N8 246 aa18.69■□□□□ 0.58
CLK1-205ENST00000434813 UXTQ9UBK9 157 aaPredicted RBP18.69■□□□□ 0.58
CLK1-205ENST00000434813 OR6C75A6NL08 312 aa18.68■□□□□ 0.58
CLK1-205ENST00000434813 RTN3O95197 1032 aaPredicted RBP18.68■□□□□ 0.58
CLK1-205ENST00000434813 TBX18O95935 607 aa18.68■□□□□ 0.58
CLK1-205ENST00000434813 CCDC166P0CW27 439 aa18.68■□□□□ 0.58
CLK1-205ENST00000434813 SLC26A3P40879 764 aa18.68■□□□□ 0.58
CLK1-205ENST00000434813 GALNT1Q10472 559 aaPredicted RBP18.68■□□□□ 0.58
CLK1-205ENST00000434813 ILF2Q12905 390 aaKnown RBP18.68■□□□□ 0.58
CLK1-205ENST00000434813 MRPL58Q14197 206 aaKnown RBP18.68■□□□□ 0.58
CLK1-205ENST00000434813 PIGGQ5H8A4 983 aa18.68■□□□□ 0.58
CLK1-205ENST00000434813 ZNF354CQ86Y25 554 aa18.68■□□□□ 0.58
CLK1-205ENST00000434813 AFAP1L2Q8N4X5 818 aa18.68■□□□□ 0.58
CLK1-205ENST00000434813 ATAD1Q8NBU5 361 aa18.68■□□□□ 0.58
CLK1-205ENST00000434813 HIPK4Q8NE63 616 aa18.68■□□□□ 0.58
CLK1-205ENST00000434813 CEP70Q8NHQ1 597 aa18.68■□□□□ 0.58
CLK1-205ENST00000434813 PPP2R3CQ969Q6 453 aa18.68■□□□□ 0.58
CLK1-205ENST00000434813 PHF24Q9UPV7 400 aa18.68■□□□□ 0.58
CLK1-205ENST00000434813 KCNA5P22460 613 aa18.67■□□□□ 0.58
CLK1-205ENST00000434813 ARSDP51689 593 aa18.67■□□□□ 0.58
CLK1-205ENST00000434813 ACVR1Q04771 509 aa18.67■□□□□ 0.58
CLK1-205ENST00000434813 SERINC3Q13530 473 aa18.67■□□□□ 0.58
CLK1-205ENST00000434813 POLD3Q15054 466 aaPredicted RBP18.67■□□□□ 0.58
CLK1-205ENST00000434813 OR52E8Q6IFG1 317 aa18.67■□□□□ 0.58
CLK1-205ENST00000434813 PTAR1Q7Z6K3 402 aaPredicted RBP18.67■□□□□ 0.58
CLK1-205ENST00000434813 MIB1Q86YT6 1006 aa18.67■□□□□ 0.58
CLK1-205ENST00000434813 SLC22A9Q8IVM8 553 aa18.67■□□□□ 0.58
CLK1-205ENST00000434813 GPR152Q8TDT2 470 aa18.67■□□□□ 0.58
CLK1-205ENST00000434813 PEX13Q92968 403 aa18.67■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms