RNA–Protein interactions for RNA: ENST00000433260.1

HMGB3P24-201, Transcript of high mobility group box 3 pseudogene 24, humanhuman

BASIC

Gene HMGB3P24, Length 622 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P24-201ENST00000433260 CAPN10Q9HC96 672 aa5.83□□□□□ -1.48
HMGB3P24-201ENST00000433260 NT5MQ9NPB1 228 aa5.83□□□□□ -1.48
HMGB3P24-201ENST00000433260 TMEM9BQ9NQ34 198 aa5.83□□□□□ -1.48
HMGB3P24-201ENST00000433260 RBM22Q9NW64 420 aaKnown RBP eCLIP5.83□□□□□ -1.48
HMGB3P24-201ENST00000433260 SEPT10Q9P0V9 454 aa5.83□□□□□ -1.48
HMGB3P24-201ENST00000433260 RCOR3Q9P2K3 495 aaPredicted RBP5.83□□□□□ -1.48
HMGB3P24-201ENST00000433260 SUSD2Q9UGT4 822 aa5.83□□□□□ -1.48
HMGB3P24-201ENST00000433260 SEPT3Q9UH03 358 aa5.83□□□□□ -1.48
HMGB3P24-201ENST00000433260 GUCA1BQ9UMX6 200 aa5.83□□□□□ -1.48
HMGB3P24-201ENST00000433260 PACSIN2Q9UNF0 486 aaPredicted RBP5.83□□□□□ -1.48
HMGB3P24-201ENST00000433260 ANKRD6Q9Y2G4 727 aa5.83□□□□□ -1.48
HMGB3P24-201ENST00000433260 SBDSQ9Y3A5 250 aaKnown RBP eCLIP5.83□□□□□ -1.48
HMGB3P24-201ENST00000433260 TTLL3Q9Y4R7 772 aa5.83□□□□□ -1.48
HMGB3P24-201ENST00000433260 FADS3Q9Y5Q0 445 aa5.83□□□□□ -1.48
HMGB3P24-201ENST00000433260 SNX11Q9Y5W9 270 aa5.83□□□□□ -1.48
HMGB3P24-201ENST00000433260 PI4KAP42356 2102 aa5.83□□□□□ -1.48
HMGB3P24-201ENST00000433260 LRRK1Q38SD2 2015 aa5.82□□□□□ -1.48
HMGB3P24-201ENST00000433260 A0A0A6YYK5 440 aaPredicted RBP5.82□□□□□ -1.48
HMGB3P24-201ENST00000433260 CXorf51AA0A1B0GTR3 108 aa5.82□□□□□ -1.48
HMGB3P24-201ENST00000433260 H0Y8X5 98 aa5.82□□□□□ -1.48
HMGB3P24-201ENST00000433260 KCNK1O00180 336 aa5.82□□□□□ -1.48
HMGB3P24-201ENST00000433260 SLC30A4O14863 429 aa5.82□□□□□ -1.48
HMGB3P24-201ENST00000433260 MATN3O15232 486 aa5.82□□□□□ -1.48
HMGB3P24-201ENST00000433260 PJA2O43164 708 aa5.82□□□□□ -1.48
HMGB3P24-201ENST00000433260 SLC7A4O43246 635 aa5.82□□□□□ -1.48
HMGB3P24-201ENST00000433260 FOXD2O60548 495 aaPredicted RBP5.82□□□□□ -1.48
HMGB3P24-201ENST00000433260 OPHN1O60890 802 aa5.82□□□□□ -1.48
HMGB3P24-201ENST00000433260 PEX11BO96011 259 aa5.82□□□□□ -1.48
HMGB3P24-201ENST00000433260 CCNB1P14635 433 aa5.82□□□□□ -1.48
HMGB3P24-201ENST00000433260 CTPS1P17812 591 aa5.82□□□□□ -1.48
HMGB3P24-201ENST00000433260 SDHBP21912 280 aa5.82□□□□□ -1.48
HMGB3P24-201ENST00000433260 SERPINA4P29622 427 aa5.82□□□□□ -1.48
HMGB3P24-201ENST00000433260 GARSP41250 739 aaKnown RBP5.82□□□□□ -1.48
HMGB3P24-201ENST00000433260 CDKN2BP42772 138 aa5.82□□□□□ -1.48
HMGB3P24-201ENST00000433260 AFF3P51826 1226 aaKnown RBP5.82□□□□□ -1.48
HMGB3P24-201ENST00000433260 HADHBP55084 474 aaKnown RBP5.82□□□□□ -1.48
HMGB3P24-201ENST00000433260 CLDN2P57739 230 aa5.82□□□□□ -1.48
HMGB3P24-201ENST00000433260 GSDMDP57764 484 aa5.82□□□□□ -1.48
HMGB3P24-201ENST00000433260 RPS21P63220 83 aaKnown RBP5.82□□□□□ -1.48
HMGB3P24-201ENST00000433260 RACK1P63244 317 aaKnown RBP5.82□□□□□ -1.48
HMGB3P24-201ENST00000433260 IL9RQ01113 521 aa5.82□□□□□ -1.48
HMGB3P24-201ENST00000433260 DSC2Q02487 901 aa5.82□□□□□ -1.48
HMGB3P24-201ENST00000433260 GALNT2Q10471 571 aa5.82□□□□□ -1.48
HMGB3P24-201ENST00000433260 SGCGQ13326 291 aa5.82□□□□□ -1.48
HMGB3P24-201ENST00000433260 ZNF211Q13398 564 aaPredicted RBP5.82□□□□□ -1.48
HMGB3P24-201ENST00000433260 PUM1Q14671 1186 aaKnown RBP eCLIP5.82□□□□□ -1.48
HMGB3P24-201ENST00000433260 RFTN1Q14699 578 aaPredicted RBP5.82□□□□□ -1.48
HMGB3P24-201ENST00000433260 UGP2Q16851 508 aa5.82□□□□□ -1.48
HMGB3P24-201ENST00000433260 SETMARQ53H47 684 aaPredicted RBP5.82□□□□□ -1.48
HMGB3P24-201ENST00000433260 SLC45A4Q5BKX6 768 aa5.82□□□□□ -1.48
HMGB3P24-201ENST00000433260 TMCO4Q5TGY1 634 aa5.82□□□□□ -1.48
HMGB3P24-201ENST00000433260 LRRC38Q5VT99 294 aa5.82□□□□□ -1.48
HMGB3P24-201ENST00000433260 DENND2CQ68D51 928 aa5.82□□□□□ -1.48
HMGB3P24-201ENST00000433260 SLC9A4Q6AI14 798 aa5.82□□□□□ -1.48
HMGB3P24-201ENST00000433260 AADACL2Q6P093 401 aa5.82□□□□□ -1.48
HMGB3P24-201ENST00000433260 MRPL14Q6P1L8 145 aaKnown RBP5.82□□□□□ -1.48
HMGB3P24-201ENST00000433260 KDM7AQ6ZMT4 941 aa5.82□□□□□ -1.48
HMGB3P24-201ENST00000433260 KDELC2Q7Z4H8 507 aa5.82□□□□□ -1.48
HMGB3P24-201ENST00000433260 RABEPKQ7Z6M1 372 aa5.82□□□□□ -1.48
HMGB3P24-201ENST00000433260 ZC3H18Q86VM9 953 aaKnown RBP5.82□□□□□ -1.48
HMGB3P24-201ENST00000433260 HORMAD1Q86X24 394 aa5.82□□□□□ -1.48
HMGB3P24-201ENST00000433260 ZSWIM9Q86XI8 627 aa5.82□□□□□ -1.48
HMGB3P24-201ENST00000433260 LRRC8AQ8IWT6 810 aa5.82□□□□□ -1.48
HMGB3P24-201ENST00000433260 CCDC13Q8IYE1 715 aa5.82□□□□□ -1.48
HMGB3P24-201ENST00000433260 LINC00528Q8N1L1 170 aa5.82□□□□□ -1.48
HMGB3P24-201ENST00000433260 PLD5Q8N7P1 536 aa5.82□□□□□ -1.48
HMGB3P24-201ENST00000433260 NETO1Q8TDF5 533 aa5.82□□□□□ -1.48
HMGB3P24-201ENST00000433260 SETD7Q8WTS6 366 aaKnown RBP5.82□□□□□ -1.48
HMGB3P24-201ENST00000433260 HAUS1Q96CS2 278 aa5.82□□□□□ -1.48
HMGB3P24-201ENST00000433260 FAF2Q96CS3 445 aa5.82□□□□□ -1.48
HMGB3P24-201ENST00000433260 KLHDC7BQ96G42 594 aa5.82□□□□□ -1.48
HMGB3P24-201ENST00000433260 ZNF599Q96NL3 588 aa5.82□□□□□ -1.48
HMGB3P24-201ENST00000433260 SMIM14Q96QK8 99 aa5.82□□□□□ -1.48
HMGB3P24-201ENST00000433260 PSKH2Q96QS6 385 aa5.82□□□□□ -1.48
HMGB3P24-201ENST00000433260 NUDCD1Q96RS6 583 aa5.82□□□□□ -1.48
HMGB3P24-201ENST00000433260 SEMA3CQ99985 751 aa5.82□□□□□ -1.48
HMGB3P24-201ENST00000433260 FAM118BQ9BPY3 351 aa5.82□□□□□ -1.48
HMGB3P24-201ENST00000433260 RTKNQ9BST9 563 aa5.82□□□□□ -1.48
HMGB3P24-201ENST00000433260 OSBPL1AQ9BXW6 950 aa5.82□□□□□ -1.48
HMGB3P24-201ENST00000433260 PCED1AQ9H1Q7 454 aa5.82□□□□□ -1.48
HMGB3P24-201ENST00000433260 CAAP1Q9H8G2 361 aa5.82□□□□□ -1.48
HMGB3P24-201ENST00000433260 C10orf88Q9H8K7 445 aa5.82□□□□□ -1.48
HMGB3P24-201ENST00000433260 NOD2Q9HC29 1040 aa5.82□□□□□ -1.48
HMGB3P24-201ENST00000433260 PREBQ9HCU5 417 aa5.82□□□□□ -1.48
HMGB3P24-201ENST00000433260 LZTFL1Q9NQ48 299 aa5.82□□□□□ -1.48
HMGB3P24-201ENST00000433260 ZNF358Q9NW07 568 aa5.82□□□□□ -1.48
HMGB3P24-201ENST00000433260 DTLQ9NZJ0 730 aa5.82□□□□□ -1.48
HMGB3P24-201ENST00000433260 AMFRQ9UKV5 643 aa5.82□□□□□ -1.48
HMGB3P24-201ENST00000433260 ZFR2Q9UPR6 939 aaKnown RBP5.82□□□□□ -1.48
HMGB3P24-201ENST00000433260 COQ6Q9Y2Z9 468 aa5.82□□□□□ -1.48
HMGB3P24-201ENST00000433260 PCDHA3Q9Y5H8 950 aa5.82□□□□□ -1.48
HMGB3P24-201ENST00000433260 TDRD6O60522 2096 aaKnown RBP5.82□□□□□ -1.48
HMGB3P24-201ENST00000433260 TRPM6Q9BX84 2022 aa5.81□□□□□ -1.48
HMGB3P24-201ENST00000433260 PCDH15Q96QU1 1955 aa5.81□□□□□ -1.48
HMGB3P24-201ENST00000433260 A0A0U1RQS6 177 aa5.81□□□□□ -1.48
HMGB3P24-201ENST00000433260 A0A1W2PR77 199 aa5.81□□□□□ -1.48
HMGB3P24-201ENST00000433260 GRID2IPA4D2P6 1211 aa5.81□□□□□ -1.48
HMGB3P24-201ENST00000433260 F5H423 210 aaPredicted RBP5.81□□□□□ -1.48
HMGB3P24-201ENST00000433260 PRAMEF26H0Y7S4 382 aa5.81□□□□□ -1.48
HMGB3P24-201ENST00000433260 TLR4O00206 839 aa5.81□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms