RNA–Protein interactions for RNA: ENST00000429846.1

MSH5-208, Transcript of mutS homolog 5, humanhuman

TSL 3

Gene MSH5, Length 616 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-208ENST00000429846 GKN2Q86XP6 184 aa15.02■□□□□ -0
MSH5-208ENST00000429846 ARL14Q8N4G2 192 aa15.02■□□□□ -0
MSH5-208ENST00000429846 OR6C4Q8NGE1 309 aa15.02■□□□□ -0
MSH5-208ENST00000429846 WDR36Q8NI36 951 aaKnown RBP15.02■□□□□ -0
MSH5-208ENST00000429846 SNRNP27Q8WVK2 155 aaKnown RBP15.02■□□□□ -0
MSH5-208ENST00000429846 WBP1Q96G27 269 aa15.02■□□□□ -0
MSH5-208ENST00000429846 NAF1Q96HR8 494 aaKnown RBP15.02■□□□□ -0
MSH5-208ENST00000429846 CCDC3Q9BQI4 270 aa15.02■□□□□ -0
MSH5-208ENST00000429846 EDEM3Q9BZQ6 932 aa15.02■□□□□ -0
MSH5-208ENST00000429846 PCDH12Q9NPG4 1184 aa15.02■□□□□ -0
MSH5-208ENST00000429846 MYO6Q9UM54 1294 aa15.02■□□□□ -0
MSH5-208ENST00000429846 AP4E1Q9UPM8 1137 aa15.02■□□□□ -0
MSH5-208ENST00000429846 KIF26BQ2KJY2 2108 aa15.01□□□□□ -0.01
MSH5-208ENST00000429846 CCDC187A0A096LP49 1063 aa15.01□□□□□ -0.01
MSH5-208ENST00000429846 CFAP69A5D8W1 941 aa15.01□□□□□ -0.01
MSH5-208ENST00000429846 CDRT15L2A8MXV6 281 aa15.01□□□□□ -0.01
MSH5-208ENST00000429846 NTN3O00634 580 aaPredicted RBP15.01□□□□□ -0.01
MSH5-208ENST00000429846 INSIG1O15503 277 aa15.01□□□□□ -0.01
MSH5-208ENST00000429846 KLK10O43240 276 aa15.01□□□□□ -0.01
MSH5-208ENST00000429846 CTSEP14091 401 aa15.01□□□□□ -0.01
MSH5-208ENST00000429846 ITIH2P19823 946 aa15.01□□□□□ -0.01
MSH5-208ENST00000429846 SERPINA4P29622 427 aa15.01□□□□□ -0.01
MSH5-208ENST00000429846 SKOR1P84550 965 aa15.01□□□□□ -0.01
MSH5-208ENST00000429846 MTM1Q13496 603 aa15.01□□□□□ -0.01
MSH5-208ENST00000429846 CRTC1Q6UUV9 634 aa15.01□□□□□ -0.01
MSH5-208ENST00000429846 CLEC14AQ86T13 490 aa15.01□□□□□ -0.01
MSH5-208ENST00000429846 PCDH19Q8TAB3 1148 aa15.01□□□□□ -0.01
MSH5-208ENST00000429846 LIN37Q96GY3 246 aaPredicted RBP15.01□□□□□ -0.01
MSH5-208ENST00000429846 ATP13A3Q9H7F0 1226 aa15.01□□□□□ -0.01
MSH5-208ENST00000429846 PARVAQ9NVD7 372 aa15.01□□□□□ -0.01
MSH5-208ENST00000429846 KLQ9UEF7 1012 aa15.01□□□□□ -0.01
MSH5-208ENST00000429846 SSUH2Q9Y2M2 353 aa15.01□□□□□ -0.01
MSH5-208ENST00000429846 ATP8A1Q9Y2Q0 1164 aa15.01□□□□□ -0.01
MSH5-208ENST00000429846 COQ6Q9Y2Z9 468 aa15.01□□□□□ -0.01
MSH5-208ENST00000429846 A0A1W2PNU3 283 aaPredicted RBP15□□□□□ -0.01
MSH5-208ENST00000429846 TMX2-CTNND1H3BSU7 103 aa15□□□□□ -0.01
MSH5-208ENST00000429846 EEF2KO00418 725 aaKnown RBP15□□□□□ -0.01
MSH5-208ENST00000429846 ITGA2BP08514 1039 aa15□□□□□ -0.01
MSH5-208ENST00000429846 PSMA2P25787 234 aa15□□□□□ -0.01
MSH5-208ENST00000429846 LIG3P49916 1009 aa15□□□□□ -0.01
MSH5-208ENST00000429846 ZNF135P52742 658 aaPredicted RBP15□□□□□ -0.01
MSH5-208ENST00000429846 PDX1P52945 283 aa15□□□□□ -0.01
MSH5-208ENST00000429846 OGDHQ02218 1023 aa15□□□□□ -0.01
MSH5-208ENST00000429846 EIF3IQ13347 325 aaKnown RBP15□□□□□ -0.01
MSH5-208ENST00000429846 MAMLD1Q13495 774 aa15□□□□□ -0.01
MSH5-208ENST00000429846 INPP5AQ14642 412 aa15□□□□□ -0.01
MSH5-208ENST00000429846 RFTN1Q14699 578 aaPredicted RBP15□□□□□ -0.01
MSH5-208ENST00000429846 ALG11Q2TAA5 492 aa15□□□□□ -0.01
MSH5-208ENST00000429846 ENPP7Q6UWV6 458 aa15□□□□□ -0.01
MSH5-208ENST00000429846 HID1Q8IV36 788 aa15□□□□□ -0.01
MSH5-208ENST00000429846 PSTKQ8IV42 348 aaKnown RBP15□□□□□ -0.01
MSH5-208ENST00000429846 NETO2Q8NC67 525 aa15□□□□□ -0.01
MSH5-208ENST00000429846 PRR11Q96HE9 360 aaPredicted RBP15□□□□□ -0.01
MSH5-208ENST00000429846 WDR92Q96MX6 357 aa15□□□□□ -0.01
MSH5-208ENST00000429846 GBP4Q96PP9 640 aa15□□□□□ -0.01
MSH5-208ENST00000429846 APOOQ9BUR5 198 aa15□□□□□ -0.01
MSH5-208ENST00000429846 KALRNO60229 2985 aa15□□□□□ -0.01
MSH5-208ENST00000429846 J3KR12 359 aa14.99□□□□□ -0.01
MSH5-208ENST00000429846 PALMO75781 387 aa14.99□□□□□ -0.01
MSH5-208ENST00000429846 RNF8O76064 485 aa14.99□□□□□ -0.01
MSH5-208ENST00000429846 CELA2BP08218 269 aaPredicted RBP14.99□□□□□ -0.01
MSH5-208ENST00000429846 TNFAIP3P21580 790 aa14.99□□□□□ -0.01
MSH5-208ENST00000429846 PAPOLAP51003 745 aaKnown RBP14.99□□□□□ -0.01
MSH5-208ENST00000429846 KIAA1024LP59773 190 aa14.99□□□□□ -0.01
MSH5-208ENST00000429846 SRP54P61011 504 aaKnown RBP14.99□□□□□ -0.01
MSH5-208ENST00000429846 POLR2LP62875 67 aaKnown RBP14.99□□□□□ -0.01
MSH5-208ENST00000429846 VAC14Q08AM6 782 aa14.99□□□□□ -0.01
MSH5-208ENST00000429846 NSUN2Q08J23 767 aaKnown RBP eCLIP14.99□□□□□ -0.01
MSH5-208ENST00000429846 TAF1BQ53T94 588 aaPredicted RBP14.99□□□□□ -0.01
MSH5-208ENST00000429846 ERMARDQ5T6L9 678 aa14.99□□□□□ -0.01
MSH5-208ENST00000429846 ARHGAP40Q5TG30 622 aa14.99□□□□□ -0.01
MSH5-208ENST00000429846 PLEKHA7Q6IQ23 1121 aa14.99□□□□□ -0.01
MSH5-208ENST00000429846 RFX8Q6ZV50 586 aa14.99□□□□□ -0.01
MSH5-208ENST00000429846 APTXQ7Z2E3 356 aaKnown RBP14.99□□□□□ -0.01
MSH5-208ENST00000429846 SRLQ86TD4 932 aa14.99□□□□□ -0.01
MSH5-208ENST00000429846 CAMK1DQ8IU85 385 aa14.99□□□□□ -0.01
MSH5-208ENST00000429846 KYQ8NBH2 561 aa14.99□□□□□ -0.01
MSH5-208ENST00000429846 FNIP1Q8TF40 1166 aa14.99□□□□□ -0.01
MSH5-208ENST00000429846 ECHDC3Q96DC8 303 aa14.99□□□□□ -0.01
MSH5-208ENST00000429846 CELF6Q96J87 481 aaKnown RBP14.99□□□□□ -0.01
MSH5-208ENST00000429846 GFM1Q96RP9 751 aaKnown RBP14.99□□□□□ -0.01
MSH5-208ENST00000429846 RBM15Q96T37 977 aaKnown RBP eCLIP14.99□□□□□ -0.019e-7■■□□□ 13.6
MSH5-208ENST00000429846 SYT11Q9BT88 431 aa14.99□□□□□ -0.01
MSH5-208ENST00000429846 CINPQ9BW66 212 aaPredicted RBP14.99□□□□□ -0.01
MSH5-208ENST00000429846 DHX35Q9H5Z1 703 aaKnown RBP14.99□□□□□ -0.01
MSH5-208ENST00000429846 SYNDIG1Q9H7V2 258 aa14.99□□□□□ -0.01
MSH5-208ENST00000429846 SP110Q9HB58 689 aa14.99□□□□□ -0.01
MSH5-208ENST00000429846 CPNE5Q9HCH3 593 aa14.99□□□□□ -0.01
MSH5-208ENST00000429846 GULP1Q9UBP9 304 aa14.99□□□□□ -0.01
MSH5-208ENST00000429846 GPR34Q9UPC5 381 aa14.99□□□□□ -0.01
MSH5-208ENST00000429846 DGKBQ9Y6T7 804 aa14.99□□□□□ -0.01
MSH5-208ENST00000429846 COL6A6A6NMZ7 2263 aa14.99□□□□□ -0.01
MSH5-208ENST00000429846 D6RAR5 112 aa14.98□□□□□ -0.01
MSH5-208ENST00000429846 CACNB4O00305 520 aaPredicted RBP14.98□□□□□ -0.01
MSH5-208ENST00000429846 DAPK3O43293 454 aa14.98□□□□□ -0.01
MSH5-208ENST00000429846 BUB1BO60566 1050 aaPredicted RBP14.98□□□□□ -0.01
MSH5-208ENST00000429846 TNFP01375 233 aa14.98□□□□□ -0.01
MSH5-208ENST00000429846 PCCBP05166 539 aa14.98□□□□□ -0.01
MSH5-208ENST00000429846 ELFN1P0C7U0 828 aa14.98□□□□□ -0.01
MSH5-208ENST00000429846 ATP1A3P13637 1013 aa14.98□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms