RNA–Protein interactions for RNA: ENST00000428962.2

THBS3-202, Transcript of thrombospondin 3, humanhuman

TSL 2

Gene THBS3, Length 1,833 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THBS3-202ENST00000428962 NEMP1O14524 444 aa13.77□□□□□ -0.21
THBS3-202ENST00000428962 TBC1D4O60343 1298 aa13.77□□□□□ -0.21
THBS3-202ENST00000428962 ATXN1LP0C7T5 689 aaKnown RBP13.77□□□□□ -0.21
THBS3-202ENST00000428962 ANPEPP15144 967 aa13.77□□□□□ -0.21
THBS3-202ENST00000428962 ITGAXP20702 1163 aa13.77□□□□□ -0.21
THBS3-202ENST00000428962 PIK3R1P27986 724 aa13.77□□□□□ -0.21
THBS3-202ENST00000428962 ETFBP38117 255 aa13.77□□□□□ -0.21
THBS3-202ENST00000428962 PFKPQ01813 784 aa13.77□□□□□ -0.21
THBS3-202ENST00000428962 SATB1Q01826 763 aa13.77□□□□□ -0.21
THBS3-202ENST00000428962 TBL3Q12788 808 aaKnown RBP13.77□□□□□ -0.21
THBS3-202ENST00000428962 HERC3Q15034 1050 aa13.77□□□□□ -0.21
THBS3-202ENST00000428962 ACAP2Q15057 778 aa13.77□□□□□ -0.21
THBS3-202ENST00000428962 LSM12Q3MHD2 195 aaKnown RBP13.77□□□□□ -0.21
THBS3-202ENST00000428962 RBM20Q5T481 1227 aaKnown RBP13.77□□□□□ -0.21
THBS3-202ENST00000428962 HECTD2Q5U5R9 776 aa13.77□□□□□ -0.21
THBS3-202ENST00000428962 TRIM68Q6AZZ1 485 aa13.77□□□□□ -0.21
THBS3-202ENST00000428962 FAM45BPQ6NSW5 357 aa13.77□□□□□ -0.21
THBS3-202ENST00000428962 C16orf89Q6UX73 402 aa13.77□□□□□ -0.21
THBS3-202ENST00000428962 TRIM67Q6ZTA4 783 aa13.77□□□□□ -0.21
THBS3-202ENST00000428962 FRMD7Q6ZUT3 714 aa13.77□□□□□ -0.21
THBS3-202ENST00000428962 NPAS4Q8IUM7 802 aa13.77□□□□□ -0.21
THBS3-202ENST00000428962 SLC22A9Q8IVM8 553 aa13.77□□□□□ -0.21
THBS3-202ENST00000428962 DEFB107AQ8IZN7 70 aa13.77□□□□□ -0.21
THBS3-202ENST00000428962 TXNDC5Q8NBS9 432 aaKnown RBP13.77□□□□□ -0.21
THBS3-202ENST00000428962 PDZD8Q8NEN9 1154 aa13.77□□□□□ -0.21
THBS3-202ENST00000428962 OR6P1Q8NGX9 317 aa13.77□□□□□ -0.21
THBS3-202ENST00000428962 RP9Q8TA86 221 aaKnown RBP13.77□□□□□ -0.21
THBS3-202ENST00000428962 FAM45AQ8TCE6 357 aa13.77□□□□□ -0.21
THBS3-202ENST00000428962 B3GALT6Q96L58 329 aa13.77□□□□□ -0.21
THBS3-202ENST00000428962 NDNQ99608 321 aa13.77□□□□□ -0.21
THBS3-202ENST00000428962 SEMA3CQ99985 751 aa13.77□□□□□ -0.21
THBS3-202ENST00000428962 TTPALQ9BTX7 342 aa13.77□□□□□ -0.21
THBS3-202ENST00000428962 TTLL2Q9BWV7 592 aa13.77□□□□□ -0.21
THBS3-202ENST00000428962 NUF2Q9BZD4 464 aa13.77□□□□□ -0.21
THBS3-202ENST00000428962 CXorf56Q9H5V9 222 aa13.77□□□□□ -0.21
THBS3-202ENST00000428962 ZDHHC2Q9UIJ5 367 aa13.77□□□□□ -0.21
THBS3-202ENST00000428962 DNMT3LQ9UJW3 386 aa13.77□□□□□ -0.21
THBS3-202ENST00000428962 LOC100653049A0A140TA62 436 aa13.76□□□□□ -0.21
THBS3-202ENST00000428962 RGSL1A5PLK6 1076 aa13.76□□□□□ -0.21
THBS3-202ENST00000428962 NBNO60934 754 aa13.76□□□□□ -0.21
THBS3-202ENST00000428962 KRT34O76011 436 aa13.76□□□□□ -0.21
THBS3-202ENST00000428962 INHAP05111 366 aa13.76□□□□□ -0.21
THBS3-202ENST00000428962 SLC11A2P49281 568 aa13.76□□□□□ -0.21
THBS3-202ENST00000428962 ACVR1Q04771 509 aa13.76□□□□□ -0.21
THBS3-202ENST00000428962 NSUN2Q08J23 767 aaKnown RBP eCLIP13.76□□□□□ -0.21
THBS3-202ENST00000428962 C5orf22Q49AR2 442 aa13.76□□□□□ -0.21
THBS3-202ENST00000428962 RALGPS1Q5JS13 557 aa13.76□□□□□ -0.21
THBS3-202ENST00000428962 LHX8Q68G74 356 aa13.76□□□□□ -0.21
THBS3-202ENST00000428962 NADSYN1Q6IA69 706 aa13.76□□□□□ -0.21
THBS3-202ENST00000428962 PGM2L1Q6PCE3 622 aa13.76□□□□□ -0.21
THBS3-202ENST00000428962 PTAR1Q7Z6K3 402 aaPredicted RBP13.76□□□□□ -0.21
THBS3-202ENST00000428962 ADGRG6Q86SQ4 1221 aa13.76□□□□□ -0.21
THBS3-202ENST00000428962 CIR1Q86X95 450 aaPredicted RBP13.76□□□□□ -0.21
THBS3-202ENST00000428962 LGI2Q8N0V4 545 aa13.76□□□□□ -0.21
THBS3-202ENST00000428962 LSMEM2Q8N112 164 aa13.76□□□□□ -0.21
THBS3-202ENST00000428962 PGBD5Q8N414 524 aa13.76□□□□□ -0.21
THBS3-202ENST00000428962 DBF4BQ8NFT6 615 aa13.76□□□□□ -0.21
THBS3-202ENST00000428962 NRG4Q8WWG1 115 aa13.76□□□□□ -0.21
THBS3-202ENST00000428962 OVCA2Q8WZ82 227 aa13.76□□□□□ -0.21
THBS3-202ENST00000428962 HDAC10Q969S8 669 aa13.76□□□□□ -0.21
THBS3-202ENST00000428962 SERPINI1Q99574 410 aa13.76□□□□□ -0.21
THBS3-202ENST00000428962 OLFM1Q99784 485 aa13.76□□□□□ -0.21
THBS3-202ENST00000428962 MAGEH1Q9H213 219 aa13.76□□□□□ -0.21
THBS3-202ENST00000428962 WDR55Q9H6Y2 383 aaPredicted RBP13.76□□□□□ -0.21
THBS3-202ENST00000428962 CCSER2Q9H7U1 834 aa13.76□□□□□ -0.21
THBS3-202ENST00000428962 CYP4F11Q9HBI6 524 aa13.76□□□□□ -0.21
THBS3-202ENST00000428962 TRPC7Q9HCX4 862 aa13.76□□□□□ -0.21
THBS3-202ENST00000428962 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP13.76□□□□□ -0.21
THBS3-202ENST00000428962 RIMKLBQ9ULI2 386 aa13.76□□□□□ -0.21
THBS3-202ENST00000428962 PRPF19Q9UMS4 504 aaKnown RBP13.76□□□□□ -0.21
THBS3-202ENST00000428962 LRCH1Q9Y2L9 728 aa13.76□□□□□ -0.21
THBS3-202ENST00000428962 VWA7Q9Y334 891 aa13.76□□□□□ -0.21
THBS3-202ENST00000428962 GREB1Q4ZG55 1949 aa13.76□□□□□ -0.21
THBS3-202ENST00000428962 AURKAO14965 403 aa13.76□□□□□ -0.21
THBS3-202ENST00000428962 IPO13O94829 963 aaKnown RBP13.76□□□□□ -0.21
THBS3-202ENST00000428962 SERPINF2P08697 491 aa13.76□□□□□ -0.21
THBS3-202ENST00000428962 CCDC166P0CW27 439 aa13.76□□□□□ -0.21
THBS3-202ENST00000428962 EPHA3P29320 983 aa13.76□□□□□ -0.21
THBS3-202ENST00000428962 ATP5C1P36542 298 aaKnown RBP13.76□□□□□ -0.21
THBS3-202ENST00000428962 PGGT1BP53609 377 aa13.76□□□□□ -0.21
THBS3-202ENST00000428962 EPHB1P54762 984 aa13.76□□□□□ -0.21
THBS3-202ENST00000428962 DUSP4Q13115 394 aa13.76□□□□□ -0.21
THBS3-202ENST00000428962 BLMHQ13867 455 aa13.76□□□□□ -0.21
THBS3-202ENST00000428962 RTP2Q5QGT7 225 aa13.76□□□□□ -0.21
THBS3-202ENST00000428962 NXNQ6DKJ4 435 aa13.76□□□□□ -0.21
THBS3-202ENST00000428962 ALG1LQ6GMV1 187 aa13.76□□□□□ -0.21
THBS3-202ENST00000428962 MRNIPQ6NTE8 343 aa13.76□□□□□ -0.21
THBS3-202ENST00000428962 FBXW8Q8N3Y1 598 aa13.76□□□□□ -0.21
THBS3-202ENST00000428962 SPATA6LQ8N4H0 392 aa13.76□□□□□ -0.21
THBS3-202ENST00000428962 SLAIN1Q8ND83 568 aa13.76□□□□□ -0.21
THBS3-202ENST00000428962 SHCBP1LQ9BZQ2 653 aa13.76□□□□□ -0.21
THBS3-202ENST00000428962 NACA2Q9H009 215 aa13.76□□□□□ -0.21
THBS3-202ENST00000428962 CRISPLD1Q9H336 500 aa13.76□□□□□ -0.21
THBS3-202ENST00000428962 ZNF385DQ9H6B1 395 aa13.76□□□□□ -0.21
THBS3-202ENST00000428962 PDFQ9HBH1 243 aa13.76□□□□□ -0.21
THBS3-202ENST00000428962 WASF2Q9Y6W5 498 aa13.76□□□□□ -0.21
THBS3-202ENST00000428962 LDB2O43679 373 aa13.75□□□□□ -0.21
THBS3-202ENST00000428962 ACSL4O60488 711 aa13.75□□□□□ -0.21
THBS3-202ENST00000428962 RPP40O75818 363 aaKnown RBP13.75□□□□□ -0.21
THBS3-202ENST00000428962 VNN2O95498 520 aa13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms