RNA–Protein interactions for RNA: ENST00000428861.1

ATG4B-210, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 2

Gene ATG4B, Length 580 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-210ENST00000428861 FUBP1Q96AE4 644 aaKnown RBP10.82□□□□□ -0.68
ATG4B-210ENST00000428861 HDAC11Q96DB2 347 aa10.82□□□□□ -0.68
ATG4B-210ENST00000428861 OLFM3Q96PB7 478 aa10.82□□□□□ -0.68
ATG4B-210ENST00000428861 LENG8Q96PV6 779 aaPredicted RBP10.82□□□□□ -0.68
ATG4B-210ENST00000428861 SEMA3CQ99985 751 aa10.82□□□□□ -0.68
ATG4B-210ENST00000428861 SLC32A1Q9H598 525 aa10.82□□□□□ -0.68
ATG4B-210ENST00000428861 ERVMER34-1Q9H9K5 563 aa10.82□□□□□ -0.68
ATG4B-210ENST00000428861 SCUBE2Q9NQ36 999 aa10.82□□□□□ -0.68
ATG4B-210ENST00000428861 RBM22Q9NW64 420 aaKnown RBP eCLIP10.82□□□□□ -0.684e-6■□□□□ 10.3
ATG4B-210ENST00000428861 TOR4AQ9NXH8 423 aa10.82□□□□□ -0.68
ATG4B-210ENST00000428861 IMPACTQ9P2X3 320 aa10.82□□□□□ -0.68
ATG4B-210ENST00000428861 SAE1Q9UBE0 346 aaPredicted RBP10.82□□□□□ -0.68
ATG4B-210ENST00000428861 KLF15Q9UIH9 416 aa10.82□□□□□ -0.68
ATG4B-210ENST00000428861 WASF3Q9UPY6 502 aa10.82□□□□□ -0.68
ATG4B-210ENST00000428861 ATP8A1Q9Y2Q0 1164 aa10.82□□□□□ -0.68
ATG4B-210ENST00000428861 HEY1Q9Y5J3 304 aa10.82□□□□□ -0.68
ATG4B-210ENST00000428861 TP53BP1Q12888 1972 aaPredicted RBP10.82□□□□□ -0.68
ATG4B-210ENST00000428861 SHROOM3Q8TF72 1996 aa10.82□□□□□ -0.68
ATG4B-210ENST00000428861 GRID2IPA4D2P6 1211 aa10.81□□□□□ -0.68
ATG4B-210ENST00000428861 GOLGA8CPA6NN73 597 aa10.81□□□□□ -0.68
ATG4B-210ENST00000428861 BTNL10A8MVZ5 291 aa10.81□□□□□ -0.68
ATG4B-210ENST00000428861 KCNK1O00180 336 aa10.81□□□□□ -0.68
ATG4B-210ENST00000428861 FZD6O60353 706 aa10.81□□□□□ -0.68
ATG4B-210ENST00000428861 SDC3O75056 442 aa10.81□□□□□ -0.68
ATG4B-210ENST00000428861 TM7SF2O76062 418 aa10.81□□□□□ -0.68
ATG4B-210ENST00000428861 MMP2P08253 660 aa10.81□□□□□ -0.68
ATG4B-210ENST00000428861 PDHA1P08559 390 aa10.81□□□□□ -0.68
ATG4B-210ENST00000428861 CCNB1P14635 433 aa10.81□□□□□ -0.68
ATG4B-210ENST00000428861 HSPA9P38646 679 aaKnown RBP10.81□□□□□ -0.68
ATG4B-210ENST00000428861 PFN3P60673 137 aa10.81□□□□□ -0.68
ATG4B-210ENST00000428861 SIM1P81133 766 aaPredicted RBP10.81□□□□□ -0.68
ATG4B-210ENST00000428861 FOXK2Q01167 660 aa10.81□□□□□ -0.68
ATG4B-210ENST00000428861 PPIDQ08752 370 aaKnown RBP10.81□□□□□ -0.68
ATG4B-210ENST00000428861 OVGP1Q12889 678 aa10.81□□□□□ -0.68
ATG4B-210ENST00000428861 SGCGQ13326 291 aa10.81□□□□□ -0.68
ATG4B-210ENST00000428861 FZD2Q14332 565 aa10.81□□□□□ -0.68
ATG4B-210ENST00000428861 TRIP6Q15654 476 aaKnown RBP10.81□□□□□ -0.68
ATG4B-210ENST00000428861 WSCD2Q2TBF2 565 aa10.81□□□□□ -0.68
ATG4B-210ENST00000428861 SLC45A4Q5BKX6 768 aa10.81□□□□□ -0.68
ATG4B-210ENST00000428861 ZNF542PQ5EBM4 170 aa10.81□□□□□ -0.68
ATG4B-210ENST00000428861 KAZNQ674X7 775 aa10.81□□□□□ -0.68
ATG4B-210ENST00000428861 ALG1LQ6GMV1 187 aa10.81□□□□□ -0.68
ATG4B-210ENST00000428861 KYAT3Q6YP21 454 aaKnown RBP10.81□□□□□ -0.68
ATG4B-210ENST00000428861 SPOCD1Q6ZMY3 1216 aa10.81□□□□□ -0.68
ATG4B-210ENST00000428861 PTAR1Q7Z6K3 402 aaPredicted RBP10.81□□□□□ -0.68
ATG4B-210ENST00000428861 SLCO6A1Q86UG4 719 aa10.81□□□□□ -0.68
ATG4B-210ENST00000428861 CCDC13Q8IYE1 715 aa10.81□□□□□ -0.68
ATG4B-210ENST00000428861 KATNAL2Q8IYT4 538 aa10.81□□□□□ -0.68
ATG4B-210ENST00000428861 PELI3Q8N2H9 469 aa10.81□□□□□ -0.68
ATG4B-210ENST00000428861 CNTD1Q8N815 330 aa10.81□□□□□ -0.68
ATG4B-210ENST00000428861 LRRC57Q8N9N7 239 aa10.81□□□□□ -0.68
ATG4B-210ENST00000428861 RHBDD1Q8TEB9 315 aa10.81□□□□□ -0.68
ATG4B-210ENST00000428861 ASB12Q8WXK4 309 aa10.81□□□□□ -0.68
ATG4B-210ENST00000428861 FATE1Q969F0 183 aa10.81□□□□□ -0.68
ATG4B-210ENST00000428861 SKA1Q96BD8 255 aa10.81□□□□□ -0.68
ATG4B-210ENST00000428861 CEP41Q9BYV8 373 aa10.81□□□□□ -0.68
ATG4B-210ENST00000428861 UCKL1Q9NWZ5 548 aa10.81□□□□□ -0.68
ATG4B-210ENST00000428861 DDX56Q9NY93 547 aaKnown RBP10.81□□□□□ -0.68
ATG4B-210ENST00000428861 B4GALT6Q9UBX8 382 aa10.81□□□□□ -0.68
ATG4B-210ENST00000428861 RAI2Q9Y5P3 530 aa10.81□□□□□ -0.68
ATG4B-210ENST00000428861 ANKRD36A6QL64 1941 aa10.81□□□□□ -0.68
ATG4B-210ENST00000428861 ASPMQ8IZT6 3477 aa10.81□□□□□ -0.68
ATG4B-210ENST00000428861 LRRK1Q38SD2 2015 aa10.8□□□□□ -0.68
ATG4B-210ENST00000428861 hCG_1818297A0A087WSY0 165 aa10.8□□□□□ -0.68
ATG4B-210ENST00000428861 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP10.8□□□□□ -0.68
ATG4B-210ENST00000428861 A6NNZ2 444 aa10.8□□□□□ -0.68
ATG4B-210ENST00000428861 FLRT2O43155 660 aa10.8□□□□□ -0.68
ATG4B-210ENST00000428861 CST8O60676 142 aa10.8□□□□□ -0.68
ATG4B-210ENST00000428861 SOCS5O75159 536 aa10.8□□□□□ -0.68
ATG4B-210ENST00000428861 PGLSO95336 258 aa10.8□□□□□ -0.68
ATG4B-210ENST00000428861 PRLP01236 227 aa10.8□□□□□ -0.68
ATG4B-210ENST00000428861 JCHAINP01591 159 aa10.8□□□□□ -0.68
ATG4B-210ENST00000428861 GIMD1P0DJR0 217 aa10.8□□□□□ -0.68
ATG4B-210ENST00000428861 SPINK2P20155 84 aa10.8□□□□□ -0.68
ATG4B-210ENST00000428861 MX2P20592 715 aa10.8□□□□□ -0.68
ATG4B-210ENST00000428861 LHCGRP22888 699 aa10.8□□□□□ -0.68
ATG4B-210ENST00000428861 XPAP23025 273 aaPredicted RBP10.8□□□□□ -0.68
ATG4B-210ENST00000428861 SUOXP51687 545 aa10.8□□□□□ -0.68
ATG4B-210ENST00000428861 ITKQ08881 620 aa10.8□□□□□ -0.68
ATG4B-210ENST00000428861 ELP6Q0PNE2 266 aa10.8□□□□□ -0.68
ATG4B-210ENST00000428861 EIF2B5Q13144 721 aaKnown RBP10.8□□□□□ -0.68
ATG4B-210ENST00000428861 IRF4Q15306 451 aa10.8□□□□□ -0.68
ATG4B-210ENST00000428861 CFAP58Q5T655 872 aa10.8□□□□□ -0.68
ATG4B-210ENST00000428861 KCTD16Q68DU8 428 aa10.8□□□□□ -0.68
ATG4B-210ENST00000428861 TIGD7Q6NT04 549 aaPredicted RBP10.8□□□□□ -0.68
ATG4B-210ENST00000428861 AADACL2Q6P093 401 aa10.8□□□□□ -0.68
ATG4B-210ENST00000428861 LIPIQ6XZB0 460 aa10.8□□□□□ -0.68
ATG4B-210ENST00000428861 RFLNAQ6ZTI6 216 aa10.8□□□□□ -0.68
ATG4B-210ENST00000428861 DPPA4Q7L190 304 aa10.8□□□□□ -0.68
ATG4B-210ENST00000428861 DAAM2Q86T65 1068 aa10.8□□□□□ -0.68
ATG4B-210ENST00000428861 TSPAN33Q86UF1 283 aa10.8□□□□□ -0.68
ATG4B-210ENST00000428861 SLC25A45Q8N413 288 aa10.8□□□□□ -0.68
ATG4B-210ENST00000428861 PNPLA1Q8N8W4 532 aa10.8□□□□□ -0.68
ATG4B-210ENST00000428861 PLA2G15Q8NCC3 412 aa10.8□□□□□ -0.68
ATG4B-210ENST00000428861 CCNYQ8ND76 341 aa10.8□□□□□ -0.68
ATG4B-210ENST00000428861 DENND6BQ8NEG7 585 aa10.8□□□□□ -0.68
ATG4B-210ENST00000428861 TRAF3IP1Q8TDR0 691 aaPredicted RBP10.8□□□□□ -0.68
ATG4B-210ENST00000428861 PDCD6IPQ8WUM4 868 aaKnown RBP10.8□□□□□ -0.68
ATG4B-210ENST00000428861 NSMCE1Q8WV22 266 aa10.8□□□□□ -0.68
ATG4B-210ENST00000428861 PIH1D2Q8WWB5 315 aa10.8□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms