RNA–Protein interactions for RNA: ENST00000428696.6

SGCE-204, Transcript of sarcoglycan epsilon, humanhuman

TSL 1 (best) BASIC

Gene SGCE, Length 1,409 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-204ENST00000428696 HORMAD1Q86X24 394 aa14.66□□□□□ -0.06
SGCE-204ENST00000428696 SYT12Q8IV01 421 aa14.66□□□□□ -0.06
SGCE-204ENST00000428696 ZCCHC9Q8N567 271 aaKnown RBP14.66□□□□□ -0.06
SGCE-204ENST00000428696 CCDC89Q8N998 374 aa14.66□□□□□ -0.06
SGCE-204ENST00000428696 IPMKQ8NFU5 416 aa14.66□□□□□ -0.06
SGCE-204ENST00000428696 SLC35B2Q8TB61 432 aa14.66□□□□□ -0.06
SGCE-204ENST00000428696 HCAR2Q8TDS4 363 aa14.66□□□□□ -0.06
SGCE-204ENST00000428696 VOPP1Q96AW1 172 aa14.66□□□□□ -0.06
SGCE-204ENST00000428696 IMP4Q96G21 291 aaKnown RBP14.66□□□□□ -0.06
SGCE-204ENST00000428696 LOXL4Q96JB6 756 aa14.66□□□□□ -0.06
SGCE-204ENST00000428696 SERAC1Q96JX3 654 aa14.66□□□□□ -0.06
SGCE-204ENST00000428696 NAP1L3Q99457 506 aaPredicted RBP14.66□□□□□ -0.06
SGCE-204ENST00000428696 ADGRE3Q9BY15 652 aa14.66□□□□□ -0.06
SGCE-204ENST00000428696 FRMD8P1Q9BZ68 369 aaPredicted RBP14.66□□□□□ -0.06
SGCE-204ENST00000428696 PCED1AQ9H1Q7 454 aa14.66□□□□□ -0.06
SGCE-204ENST00000428696 USP29Q9HBJ7 922 aa14.66□□□□□ -0.06
SGCE-204ENST00000428696 PHTF1Q9UMS5 762 aa14.66□□□□□ -0.06
SGCE-204ENST00000428696 A0A1W2PQ67 120 aa14.65□□□□□ -0.06
SGCE-204ENST00000428696 PROB1E7EW31 1015 aa14.65□□□□□ -0.06
SGCE-204ENST00000428696 PGRMC1O00264 195 aaKnown RBP14.65□□□□□ -0.06
SGCE-204ENST00000428696 RIOK3O14730 519 aaKnown RBP14.65□□□□□ -0.06
SGCE-204ENST00000428696 IGHV4-34P06331 123 aa14.65□□□□□ -0.06
SGCE-204ENST00000428696 MMP2P08253 660 aa14.65□□□□□ -0.06
SGCE-204ENST00000428696 ALPIP09923 528 aa14.65□□□□□ -0.06
SGCE-204ENST00000428696 C7P10643 843 aa14.65□□□□□ -0.06
SGCE-204ENST00000428696 TCP1P17987 556 aaKnown RBP14.65□□□□□ -0.06
SGCE-204ENST00000428696 NFKBIAP25963 317 aa14.65□□□□□ -0.06
SGCE-204ENST00000428696 CD27P26842 260 aa14.65□□□□□ -0.06
SGCE-204ENST00000428696 CD68P34810 354 aaPredicted RBP14.65□□□□□ -0.06
SGCE-204ENST00000428696 ACTN2P35609 894 aa14.65□□□□□ -0.06
SGCE-204ENST00000428696 KCNJ1P48048 391 aa14.65□□□□□ -0.06
SGCE-204ENST00000428696 CCR5P51681 352 aa14.65□□□□□ -0.06
SGCE-204ENST00000428696 IHHQ14623 411 aa14.65□□□□□ -0.06
SGCE-204ENST00000428696 CCNG2Q16589 344 aa14.65□□□□□ -0.06
SGCE-204ENST00000428696 SETMARQ53H47 684 aaPredicted RBP14.65□□□□□ -0.06
SGCE-204ENST00000428696 NEK5Q6P3R8 708 aa14.65□□□□□ -0.06
SGCE-204ENST00000428696 USP45Q70EL2 814 aa14.65□□□□□ -0.06
SGCE-204ENST00000428696 SLC25A41Q8N5S1 370 aa14.65□□□□□ -0.06
SGCE-204ENST00000428696 ZNF592Q92610 1267 aa14.65□□□□□ -0.06
SGCE-204ENST00000428696 MAGOHBQ96A72 148 aaKnown RBP14.65□□□□□ -0.06
SGCE-204ENST00000428696 C16orf45Q96MC5 204 aaPredicted RBP14.65□□□□□ -0.06
SGCE-204ENST00000428696 SPATA13Q96N96 652 aa14.65□□□□□ -0.06
SGCE-204ENST00000428696 SMIM14Q96QK8 99 aa14.65□□□□□ -0.06
SGCE-204ENST00000428696 SLC17A9Q9BYT1 436 aa14.65□□□□□ -0.06
SGCE-204ENST00000428696 FZD3Q9NPG1 666 aa14.65□□□□□ -0.06
SGCE-204ENST00000428696 FAM153AQ9UHL3 310 aa14.65□□□□□ -0.06
SGCE-204ENST00000428696 SAR1BQ9Y6B6 198 aa14.65□□□□□ -0.06
SGCE-204ENST00000428696 NUMA1Q14980 2115 aa14.65□□□□□ -0.07
SGCE-204ENST00000428696 DMDP11532 3685 aa14.64□□□□□ -0.07
SGCE-204ENST00000428696 GON4LQ3T8J9 2241 aa14.64□□□□□ -0.07
SGCE-204ENST00000428696 A0A0U1RQS6 177 aa14.64□□□□□ -0.07
SGCE-204ENST00000428696 CFAP69A5D8W1 941 aa14.64□□□□□ -0.07
SGCE-204ENST00000428696 PATE3B3GLJ2 98 aa14.64□□□□□ -0.07
SGCE-204ENST00000428696 HTRA2O43464 458 aaPredicted RBP14.64□□□□□ -0.07
SGCE-204ENST00000428696 AP1G1O43747 822 aa14.64□□□□□ -0.07
SGCE-204ENST00000428696 EPN2O95208 641 aa14.64□□□□□ -0.07
SGCE-204ENST00000428696 SLC4A1P02730 911 aa14.64□□□□□ -0.07
SGCE-204ENST00000428696 PSMB4P28070 264 aa14.64□□□□□ -0.07
SGCE-204ENST00000428696 STIP1P31948 543 aaKnown RBP14.64□□□□□ -0.07
SGCE-204ENST00000428696 LMAN1P49257 510 aa14.64□□□□□ -0.07
SGCE-204ENST00000428696 LIG3P49916 1009 aa14.64□□□□□ -0.07
SGCE-204ENST00000428696 SUOXP51687 545 aa14.64□□□□□ -0.07
SGCE-204ENST00000428696 TERF1P54274 439 aa14.64□□□□□ -0.07
SGCE-204ENST00000428696 GDF10P55107 478 aa14.64□□□□□ -0.07
SGCE-204ENST00000428696 ARHGEF7Q14155 803 aa14.64□□□□□ -0.07
SGCE-204ENST00000428696 STAT4Q14765 748 aa14.64□□□□□ -0.07
SGCE-204ENST00000428696 ACOX1Q15067 660 aa14.64□□□□□ -0.07
SGCE-204ENST00000428696 KCTD19Q17RG1 926 aaPredicted RBP14.64□□□□□ -0.07
SGCE-204ENST00000428696 FAXCQ5TGI0 409 aa14.64□□□□□ -0.07
SGCE-204ENST00000428696 PRUNE1Q86TP1 453 aa14.64□□□□□ -0.07
SGCE-204ENST00000428696 C12orf50Q8NA57 414 aaPredicted RBP14.64□□□□□ -0.07
SGCE-204ENST00000428696 ECHDC3Q96DC8 303 aa14.64□□□□□ -0.07
SGCE-204ENST00000428696 FCRL5Q96RD9 977 aa14.64□□□□□ -0.07
SGCE-204ENST00000428696 FSD1LQ9BXM9 530 aa14.64□□□□□ -0.07
SGCE-204ENST00000428696 TDRD1Q9BXT4 1180 aaKnown RBP14.64□□□□□ -0.07
SGCE-204ENST00000428696 FSCN3Q9NQT6 498 aa14.64□□□□□ -0.07
SGCE-204ENST00000428696 KCND1Q9NSA2 647 aa14.64□□□□□ -0.07
SGCE-204ENST00000428696 HOMER3Q9NSC5 361 aa14.64□□□□□ -0.07
SGCE-204ENST00000428696 B4GALT6Q9UBX8 382 aa14.64□□□□□ -0.07
SGCE-204ENST00000428696 PILRBQ9UKJ0 227 aa14.64□□□□□ -0.07
SGCE-204ENST00000428696 ZFR2Q9UPR6 939 aaKnown RBP14.64□□□□□ -0.07
SGCE-204ENST00000428696 COQ6Q9Y2Z9 468 aa14.64□□□□□ -0.07
SGCE-204ENST00000428696 THADAQ6YHU6 1953 aa14.64□□□□□ -0.07
SGCE-204ENST00000428696 EML5Q05BV3 1969 aa14.63□□□□□ -0.07
SGCE-204ENST00000428696 GOLGA6L10A0A0M3HER8 536 aa14.63□□□□□ -0.07
SGCE-204ENST00000428696 A0A1W2PPC4 97 aa14.63□□□□□ -0.07
SGCE-204ENST00000428696 TSPAN11A1L157 253 aa14.63□□□□□ -0.07
SGCE-204ENST00000428696 C5orf60A6NFR6 353 aa14.63□□□□□ -0.07
SGCE-204ENST00000428696 AREL1O15033 823 aa14.63□□□□□ -0.07
SGCE-204ENST00000428696 KHNYNO15037 678 aaKnown RBP14.63□□□□□ -0.07
SGCE-204ENST00000428696 BCAT2O15382 392 aaPredicted RBP14.63□□□□□ -0.07
SGCE-204ENST00000428696 OPHN1O60890 802 aa14.63□□□□□ -0.07
SGCE-204ENST00000428696 ZNF189O75820 626 aaPredicted RBP14.63□□□□□ -0.07
SGCE-204ENST00000428696 ANXA9O76027 345 aa14.63□□□□□ -0.07
SGCE-204ENST00000428696 TM7SF2O76062 418 aa14.63□□□□□ -0.07
SGCE-204ENST00000428696 ELFN1P0C7U0 828 aa14.63□□□□□ -0.07
SGCE-204ENST00000428696 PIRTP0C851 137 aa14.63□□□□□ -0.07
SGCE-204ENST00000428696 ETS1P14921 441 aa14.63□□□□□ -0.07
SGCE-204ENST00000428696 HNF1BP35680 557 aa14.63□□□□□ -0.07
SGCE-204ENST00000428696 CSNK1EP49674 416 aaKnown RBP14.63□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms