RNA–Protein interactions for RNA: ENST00000428135.7

SNX13-203, Transcript of sorting nexin 13, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX13, Length 6,357 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-203ENST00000428135 BAP1Q92560 729 aa9.78□□□□□ -0.84
SNX13-203ENST00000428135 SH3GL1Q99961 368 aa9.78□□□□□ -0.84
SNX13-203ENST00000428135 TMEM79Q9BSE2 394 aa9.78□□□□□ -0.84
SNX13-203ENST00000428135 ALKBH4Q9NXW9 302 aa9.78□□□□□ -0.84
SNX13-203ENST00000428135 BMP10O95393 424 aa9.78□□□□□ -0.84
SNX13-203ENST00000428135 KRT8P05787 483 aa9.78□□□□□ -0.84
SNX13-203ENST00000428135 PSMB9P28065 219 aa9.78□□□□□ -0.84
SNX13-203ENST00000428135 FUT2Q10981 343 aa9.78□□□□□ -0.84
SNX13-203ENST00000428135 DDI2Q5TDH0 399 aa9.78□□□□□ -0.84
SNX13-203ENST00000428135 FAM45BPQ6NSW5 357 aa9.78□□□□□ -0.84
SNX13-203ENST00000428135 PRR23BQ6ZRT6 265 aa9.78□□□□□ -0.84
SNX13-203ENST00000428135 XYLT1Q86Y38 959 aa9.78□□□□□ -0.84
SNX13-203ENST00000428135 FAM45AQ8TCE6 357 aa9.78□□□□□ -0.84
SNX13-203ENST00000428135 ARMC7Q9H6L4 198 aa9.78□□□□□ -0.84
SNX13-203ENST00000428135 L2HGDHQ9H9P8 463 aa9.78□□□□□ -0.84
SNX13-203ENST00000428135 CHADO15335 359 aa9.78□□□□□ -0.84
SNX13-203ENST00000428135 LRPAP1P30533 357 aa9.78□□□□□ -0.84
SNX13-203ENST00000428135 VHLP40337 213 aa9.78□□□□□ -0.84
SNX13-203ENST00000428135 GATMP50440 423 aa9.78□□□□□ -0.84
SNX13-203ENST00000428135 FAM98BQ52LJ0 330 aaKnown RBP9.78□□□□□ -0.84
SNX13-203ENST00000428135 ICE2Q659A1 982 aa9.78□□□□□ -0.84
SNX13-203ENST00000428135 ANKRD6Q9Y2G4 727 aa9.78□□□□□ -0.84
SNX13-203ENST00000428135 KRT33AO76009 404 aa9.77□□□□□ -0.84
SNX13-203ENST00000428135 C4BPAP04003 597 aaKnown RBP9.77□□□□□ -0.84
SNX13-203ENST00000428135 TIE1P35590 1138 aa9.77□□□□□ -0.84
SNX13-203ENST00000428135 GBE1Q04446 702 aa9.77□□□□□ -0.84
SNX13-203ENST00000428135 OASLQ15646 514 aaKnown RBP9.77□□□□□ -0.84
SNX13-203ENST00000428135 MEA1Q16626 185 aa9.77□□□□□ -0.84
SNX13-203ENST00000428135 PHF13Q86YI8 300 aaPredicted RBP9.77□□□□□ -0.84
SNX13-203ENST00000428135 C4orf32Q8N8J7 132 aa9.77□□□□□ -0.84
SNX13-203ENST00000428135 PROX1Q92786 737 aa9.77□□□□□ -0.84
SNX13-203ENST00000428135 LMLNQ96KR4 655 aa9.77□□□□□ -0.84
SNX13-203ENST00000428135 ZNF839A8K0R7 811 aa9.77□□□□□ -0.85
SNX13-203ENST00000428135 LYPLA1O75608 230 aaPredicted RBP9.77□□□□□ -0.85
SNX13-203ENST00000428135 FTH1P02794 183 aa9.77□□□□□ -0.85
SNX13-203ENST00000428135 TACR2P21452 398 aa9.77□□□□□ -0.85
SNX13-203ENST00000428135 TLX1P31314 330 aaPredicted RBP9.77□□□□□ -0.85
SNX13-203ENST00000428135 EPS8Q12929 822 aa9.77□□□□□ -0.85
SNX13-203ENST00000428135 MAD2L1Q13257 205 aaPredicted RBP9.77□□□□□ -0.85
SNX13-203ENST00000428135 TAF13Q15543 124 aa9.77□□□□□ -0.85
SNX13-203ENST00000428135 ARMCX6Q7L4S7 300 aa9.77□□□□□ -0.85
SNX13-203ENST00000428135 TAF8Q7Z7C8 310 aa9.77□□□□□ -0.85
SNX13-203ENST00000428135 ATP6V1C2Q8NEY4 427 aa9.77□□□□□ -0.85
SNX13-203ENST00000428135 PNPT1Q8TCS8 783 aaKnown RBP9.77□□□□□ -0.85
SNX13-203ENST00000428135 HNRNPLLQ8WVV9 542 aaKnown RBP9.77□□□□□ -0.85
SNX13-203ENST00000428135 ZNF214Q9UL59 606 aaPredicted RBP9.77□□□□□ -0.85
SNX13-203ENST00000428135 RAI2Q9Y5P3 530 aa9.77□□□□□ -0.85
SNX13-203ENST00000428135 LILRA4P59901 499 aa9.77□□□□□ -0.85
SNX13-203ENST00000428135 CBX2Q14781 532 aaPredicted RBP9.77□□□□□ -0.85
SNX13-203ENST00000428135 NAPRTQ6XQN6 538 aa9.77□□□□□ -0.85
SNX13-203ENST00000428135 UBE2R2Q712K3 238 aaPredicted RBP9.77□□□□□ -0.85
SNX13-203ENST00000428135 IRF2BP2Q7Z5L9 587 aa9.77□□□□□ -0.85
SNX13-203ENST00000428135 DHFR2Q86XF0 187 aa9.77□□□□□ -0.85
SNX13-203ENST00000428135 HMCESQ96FZ2 354 aa9.77□□□□□ -0.85
SNX13-203ENST00000428135 PTPN18Q99952 460 aa9.77□□□□□ -0.85
SNX13-203ENST00000428135 GTF2IRD1Q9UHL9 959 aa9.77□□□□□ -0.85
SNX13-203ENST00000428135 COL1A2P08123 1366 aa9.77□□□□□ -0.85
SNX13-203ENST00000428135 FOXO6A8MYZ6 492 aa9.77□□□□□ -0.85
SNX13-203ENST00000428135 RNF225M0QZC1 329 aaPredicted RBP9.77□□□□□ -0.85
SNX13-203ENST00000428135 CAPN1P07384 714 aa9.77□□□□□ -0.85
SNX13-203ENST00000428135 CYB5D1Q6P9G0 228 aa9.77□□□□□ -0.85
SNX13-203ENST00000428135 IZUMO2Q6UXV1 221 aa9.77□□□□□ -0.85
SNX13-203ENST00000428135 TMPRSS11BQ86T26 416 aa9.77□□□□□ -0.85
SNX13-203ENST00000428135 FAM9CQ8IZT9 166 aa9.77□□□□□ -0.85
SNX13-203ENST00000428135 ZNF655Q8N720 491 aaPredicted RBP9.77□□□□□ -0.85
SNX13-203ENST00000428135 KREMEN2Q8NCW0 462 aa9.77□□□□□ -0.85
SNX13-203ENST00000428135 VPS33AQ96AX1 596 aa9.77□□□□□ -0.85
SNX13-203ENST00000428135 COPS8Q99627 209 aa9.77□□□□□ -0.85
SNX13-203ENST00000428135 MYLK2Q9H1R3 596 aa9.77□□□□□ -0.85
SNX13-203ENST00000428135 MRGBPQ9NV56 204 aa9.77□□□□□ -0.85
SNX13-203ENST00000428135 GPN3Q9UHW5 284 aaPredicted RBP9.77□□□□□ -0.85
SNX13-203ENST00000428135 ANGPT4Q9Y264 503 aa9.77□□□□□ -0.85
SNX13-203ENST00000428135 ZMYM2Q9UBW7 1377 aa9.77□□□□□ -0.85
SNX13-203ENST00000428135 A0A088AWK7 358 aa9.77□□□□□ -0.85
SNX13-203ENST00000428135 DEAF1O75398 565 aaPredicted RBP9.77□□□□□ -0.85
SNX13-203ENST00000428135 ZNF10P21506 573 aaPredicted RBP9.77□□□□□ -0.85
SNX13-203ENST00000428135 ARL2P36404 184 aa9.77□□□□□ -0.85
SNX13-203ENST00000428135 GPM6BQ13491 265 aa9.77□□□□□ -0.85
SNX13-203ENST00000428135 MPPE1Q53F39 396 aa9.77□□□□□ -0.85
SNX13-203ENST00000428135 CFAP206Q8IYR0 622 aa9.77□□□□□ -0.85
SNX13-203ENST00000428135 PRELID2Q8N945 189 aa9.77□□□□□ -0.85
SNX13-203ENST00000428135 BTN2A3PQ96KV6 586 aa9.77□□□□□ -0.85
SNX13-203ENST00000428135 SNX6Q9UNH7 406 aa9.77□□□□□ -0.85
SNX13-203ENST00000428135 MAFBQ9Y5Q3 323 aaPredicted RBP9.77□□□□□ -0.85
SNX13-203ENST00000428135 F7P08709 466 aaPredicted RBP9.76□□□□□ -0.85
SNX13-203ENST00000428135 PABPC1P11940 636 aaKnown RBP9.76□□□□□ -0.85
SNX13-203ENST00000428135 RALGDSQ12967 914 aa9.76□□□□□ -0.85
SNX13-203ENST00000428135 NRF1Q16656 503 aa9.76□□□□□ -0.85
SNX13-203ENST00000428135 ZNF670Q9BS34 389 aa9.76□□□□□ -0.85
SNX13-203ENST00000428135 WRAP73Q9P2S5 460 aaPredicted RBP9.76□□□□□ -0.85
SNX13-203ENST00000428135 CILPO75339 1184 aa9.76□□□□□ -0.85
SNX13-203ENST00000428135 HNRNPCP07910 306 aaKnown RBP eCLIP9.76□□□□□ -0.85
SNX13-203ENST00000428135 SP2Q02086 613 aa9.76□□□□□ -0.85
SNX13-203ENST00000428135 UBAP2LQ14157 1087 aaKnown RBP9.76□□□□□ -0.85
SNX13-203ENST00000428135 SH3PXD2AQ5TCZ1 1133 aa9.76□□□□□ -0.85
SNX13-203ENST00000428135 CASP12Q6UXS9 341 aa9.76□□□□□ -0.85
SNX13-203ENST00000428135 PARP8Q8N3A8 854 aa9.76□□□□□ -0.85
SNX13-203ENST00000428135 ITFG1Q8TB96 612 aa9.76□□□□□ -0.85
SNX13-203ENST00000428135 CAVIN3Q969G5 261 aa9.76□□□□□ -0.85
SNX13-203ENST00000428135 PMEPA1Q969W9 287 aa9.76□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms