RNA–Protein interactions for RNA: ENST00000428021.1

VRK2-204, Transcript of vaccinia related kinase 2, humanhuman

TSL 4

Gene VRK2, Length 553 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2-204ENST00000428021 LLGL1Q15334 1064 aa16.81■□□□□ 0.28
VRK2-204ENST00000428021 CFAP58Q5T655 872 aa16.81■□□□□ 0.28
VRK2-204ENST00000428021 ALG1LQ6GMV1 187 aa16.81■□□□□ 0.28
VRK2-204ENST00000428021 KDM7AQ6ZMT4 941 aa16.81■□□□□ 0.28
VRK2-204ENST00000428021 CCDC13Q8IYE1 715 aa16.81■□□□□ 0.28
VRK2-204ENST00000428021 SLC22A18ASQ8N1D0 253 aa16.81■□□□□ 0.28
VRK2-204ENST00000428021 LRRC57Q8N9N7 239 aa16.81■□□□□ 0.28
VRK2-204ENST00000428021 CCNYQ8ND76 341 aa16.81■□□□□ 0.28
VRK2-204ENST00000428021 DENND6BQ8NEG7 585 aa16.81■□□□□ 0.28
VRK2-204ENST00000428021 TRAF3IP1Q8TDR0 691 aaPredicted RBP16.81■□□□□ 0.28
VRK2-204ENST00000428021 CXorf40AQ8TE69 158 aa16.81■□□□□ 0.28
VRK2-204ENST00000428021 CALR3Q96L12 384 aaKnown RBP16.81■□□□□ 0.28
VRK2-204ENST00000428021 DESI2Q9BSY9 194 aa16.81■□□□□ 0.28
VRK2-204ENST00000428021 RBM22Q9NW64 420 aaKnown RBP eCLIP16.81■□□□□ 0.28
VRK2-204ENST00000428021 TRIM10Q9UDY6 481 aa16.81■□□□□ 0.28
VRK2-204ENST00000428021 PCOLCE2Q9UKZ9 415 aa16.81■□□□□ 0.28
VRK2-204ENST00000428021 BTBD3Q9Y2F9 522 aa16.81■□□□□ 0.28
VRK2-204ENST00000428021 SPAARA0A1B0GVQ0 90 aa16.8■□□□□ 0.28
VRK2-204ENST00000428021 A6NNZ2 444 aa16.8■□□□□ 0.28
VRK2-204ENST00000428021 SOCS5O75159 536 aa16.8■□□□□ 0.28
VRK2-204ENST00000428021 TM7SF2O76062 418 aa16.8■□□□□ 0.28
VRK2-204ENST00000428021 ZRANB2O95218 330 aaKnown RBP eCLIP16.8■□□□□ 0.28
VRK2-204ENST00000428021 ODF2Q5BJF6 829 aa16.8■□□□□ 0.28
VRK2-204ENST00000428021 FAM182AQ5T1J6 154 aa16.8■□□□□ 0.28
VRK2-204ENST00000428021 ERAP2Q6P179 960 aa16.8■□□□□ 0.28
VRK2-204ENST00000428021 KYAT3Q6YP21 454 aaKnown RBP16.8■□□□□ 0.28
VRK2-204ENST00000428021 Q6ZSR6 202 aa16.8■□□□□ 0.28
VRK2-204ENST00000428021 KIAA1328Q86T90 577 aa16.8■□□□□ 0.28
VRK2-204ENST00000428021 RCOR2Q8IZ40 523 aa16.8■□□□□ 0.28
VRK2-204ENST00000428021 BAHD1Q8TBE0 780 aaPredicted RBP16.8■□□□□ 0.28
VRK2-204ENST00000428021 ARRDC2Q8TBH0 407 aa16.8■□□□□ 0.28
VRK2-204ENST00000428021 FAM174AQ8TBP5 190 aa16.8■□□□□ 0.28
VRK2-204ENST00000428021 SAP25Q8TEE9 199 aa16.8■□□□□ 0.28
VRK2-204ENST00000428021 IL12RB2Q99665 862 aa16.8■□□□□ 0.28
VRK2-204ENST00000428021 SEMA3CQ99985 751 aa16.8■□□□□ 0.28
VRK2-204ENST00000428021 AMACRQ9UHK6 382 aa16.8■□□□□ 0.28
VRK2-204ENST00000428021 COQ6Q9Y2Z9 468 aa16.8■□□□□ 0.28
VRK2-204ENST00000428021 hCG_1818297A0A087WSY0 165 aa16.79■□□□□ 0.28
VRK2-204ENST00000428021 GRID2IPA4D2P6 1211 aa16.79■□□□□ 0.28
VRK2-204ENST00000428021 KCNK1O00180 336 aa16.79■□□□□ 0.28
VRK2-204ENST00000428021 FLRT2O43155 660 aa16.79■□□□□ 0.28
VRK2-204ENST00000428021 JCHAINP01591 159 aa16.79■□□□□ 0.28
VRK2-204ENST00000428021 HLA-DQB2P05538 268 aa16.79■□□□□ 0.28
VRK2-204ENST00000428021 C6P13671 934 aa16.79■□□□□ 0.28
VRK2-204ENST00000428021 CTNNA1P35221 906 aaKnown RBP16.79■□□□□ 0.28
VRK2-204ENST00000428021 IGFALSP35858 605 aa16.79■□□□□ 0.28
VRK2-204ENST00000428021 LIG3P49916 1009 aa16.79■□□□□ 0.28
VRK2-204ENST00000428021 PFN3P60673 137 aa16.79■□□□□ 0.28
VRK2-204ENST00000428021 POLR2LP62875 67 aaKnown RBP16.79■□□□□ 0.28
VRK2-204ENST00000428021 DYNLT1P63172 113 aa16.79■□□□□ 0.28
VRK2-204ENST00000428021 IFI35P80217 286 aaPredicted RBP16.79■□□□□ 0.28
VRK2-204ENST00000428021 DSC2Q02487 901 aa16.79■□□□□ 0.28
VRK2-204ENST00000428021 NIPAL4Q0D2K0 466 aa16.79■□□□□ 0.28
VRK2-204ENST00000428021 BNIP3Q12983 259 aa16.79■□□□□ 0.28
VRK2-204ENST00000428021 SUZ12Q15022 739 aaKnown RBP16.79■□□□□ 0.28
VRK2-204ENST00000428021 PDK1Q15118 436 aa16.79■□□□□ 0.28
VRK2-204ENST00000428021 TPRG1LQ5T0D9 272 aa16.79■□□□□ 0.28
VRK2-204ENST00000428021 KANSL1Q7Z3B3 1105 aa16.79■□□□□ 0.28
VRK2-204ENST00000428021 PTAR1Q7Z6K3 402 aaPredicted RBP16.79■□□□□ 0.28
VRK2-204ENST00000428021 GATAD2AQ86YP4 633 aa16.79■□□□□ 0.28
VRK2-204ENST00000428021 OXR1Q8N573 874 aa16.79■□□□□ 0.28
VRK2-204ENST00000428021 CNTD1Q8N815 330 aa16.79■□□□□ 0.28
VRK2-204ENST00000428021 TP53I13Q8NBR0 393 aaPredicted RBP16.79■□□□□ 0.28
VRK2-204ENST00000428021 EXD1Q8NHP7 514 aa16.79■□□□□ 0.28
VRK2-204ENST00000428021 SETD7Q8WTS6 366 aaKnown RBP16.79■□□□□ 0.28
VRK2-204ENST00000428021 ZNF830Q96NB3 372 aaPredicted RBP16.79■□□□□ 0.28
VRK2-204ENST00000428021 POLR1EQ9GZS1 481 aaKnown RBP16.79■□□□□ 0.28
VRK2-204ENST00000428021 CAAP1Q9H8G2 361 aa16.79■□□□□ 0.28
VRK2-204ENST00000428021 MBNL1Q9NR56 388 aaKnown RBP16.79■□□□□ 0.28
VRK2-204ENST00000428021 SAE1Q9UBE0 346 aaPredicted RBP16.79■□□□□ 0.28
VRK2-204ENST00000428021 PCDHB9Q9Y5E1 797 aa16.79■□□□□ 0.28
VRK2-204ENST00000428021 PCDHA3Q9Y5H8 950 aa16.79■□□□□ 0.28
VRK2-204ENST00000428021 ARID1BQ8NFD5 2236 aaPredicted RBP16.78■□□□□ 0.28
VRK2-204ENST00000428021 A0A1W2PQ67 120 aa16.78■□□□□ 0.28
VRK2-204ENST00000428021 CFAP69A5D8W1 941 aa16.78■□□□□ 0.28
VRK2-204ENST00000428021 FPGTO14772 594 aa16.78■□□□□ 0.28
VRK2-204ENST00000428021 FZD6O60353 706 aa16.78■□□□□ 0.28
VRK2-204ENST00000428021 CST8O60676 142 aa16.78■□□□□ 0.28
VRK2-204ENST00000428021 PGLSO95336 258 aa16.78■□□□□ 0.28
VRK2-204ENST00000428021 PECAM1P16284 738 aaPredicted RBP16.78■□□□□ 0.28
VRK2-204ENST00000428021 GM2AP17900 193 aa16.78■□□□□ 0.28
VRK2-204ENST00000428021 EPHA8P29322 1005 aaPredicted RBP16.78■□□□□ 0.28
VRK2-204ENST00000428021 NAP1L1P55209 391 aaKnown RBP16.78■□□□□ 0.28
VRK2-204ENST00000428021 GSDMDP57764 484 aa16.78■□□□□ 0.28
VRK2-204ENST00000428021 ITKQ08881 620 aa16.78■□□□□ 0.28
VRK2-204ENST00000428021 ZBTB17Q13105 803 aa16.78■□□□□ 0.28
VRK2-204ENST00000428021 TFDP2Q14188 446 aa16.78■□□□□ 0.28
VRK2-204ENST00000428021 AGERQ15109 404 aa16.78■□□□□ 0.28
VRK2-204ENST00000428021 TRIP6Q15654 476 aaKnown RBP16.78■□□□□ 0.28
VRK2-204ENST00000428021 WSCD2Q2TBF2 565 aa16.78■□□□□ 0.28
VRK2-204ENST00000428021 TFDP3Q5H9I0 405 aa16.78■□□□□ 0.28
VRK2-204ENST00000428021 KAZNQ674X7 775 aa16.78■□□□□ 0.28
VRK2-204ENST00000428021 LIPIQ6XZB0 460 aa16.78■□□□□ 0.28
VRK2-204ENST00000428021 B4GALNT4Q76KP1 1039 aa16.78■□□□□ 0.28
VRK2-204ENST00000428021 DPPA4Q7L190 304 aa16.78■□□□□ 0.28
VRK2-204ENST00000428021 KIAA1524Q8TCG1 905 aa16.78■□□□□ 0.28
VRK2-204ENST00000428021 RHBDD1Q8TEB9 315 aa16.78■□□□□ 0.28
VRK2-204ENST00000428021 PDCD6IPQ8WUM4 868 aaKnown RBP16.78■□□□□ 0.28
VRK2-204ENST00000428021 PIH1D2Q8WWB5 315 aa16.78■□□□□ 0.28
VRK2-204ENST00000428021 B4GALT6Q9UBX8 382 aa16.78■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms