RNA–Protein interactions for RNA: ENST00000428014.1

SMC1A-203, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 3

Gene SMC1A, Length 868 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-203ENST00000428014 CDH19Q9H159 772 aa9.22□□□□□ -0.93
SMC1A-203ENST00000428014 PHTF1Q9UMS5 762 aa9.22□□□□□ -0.93
SMC1A-203ENST00000428014 ZFR2Q9UPR6 939 aaKnown RBP9.22□□□□□ -0.93
SMC1A-203ENST00000428014 WASF3Q9UPY6 502 aa9.22□□□□□ -0.93
SMC1A-203ENST00000428014 APOBEC2Q9Y235 224 aaKnown RBP9.22□□□□□ -0.93
SMC1A-203ENST00000428014 ATP8A1Q9Y2Q0 1164 aa9.22□□□□□ -0.93
SMC1A-203ENST00000428014 PCDHA13Q9Y5I0 950 aa9.22□□□□□ -0.93
SMC1A-203ENST00000428014 SNX11Q9Y5W9 270 aa9.22□□□□□ -0.93
SMC1A-203ENST00000428014 PLXNA2O75051 1894 aa9.21□□□□□ -0.93
SMC1A-203ENST00000428014 CCDC66A2RUB6 948 aa9.21□□□□□ -0.94
SMC1A-203ENST00000428014 DCDC2BA2VCK2 349 aa9.21□□□□□ -0.94
SMC1A-203ENST00000428014 RGSL1A5PLK6 1076 aa9.21□□□□□ -0.94
SMC1A-203ENST00000428014 TMEM8BA6NDV4 472 aa9.21□□□□□ -0.94
SMC1A-203ENST00000428014 NEMP2A6NFY4 417 aa9.21□□□□□ -0.94
SMC1A-203ENST00000428014 DFFAO00273 331 aa9.21□□□□□ -0.94
SMC1A-203ENST00000428014 FPGTO14772 594 aa9.21□□□□□ -0.94
SMC1A-203ENST00000428014 PPP1R12AO14974 1030 aaPredicted RBP9.21□□□□□ -0.94
SMC1A-203ENST00000428014 INSIG1O15503 277 aa9.21□□□□□ -0.94
SMC1A-203ENST00000428014 SPINT1O43278 529 aa9.21□□□□□ -0.94
SMC1A-203ENST00000428014 TNFSF14O43557 240 aa9.21□□□□□ -0.94
SMC1A-203ENST00000428014 LZTS3O60299 673 aaPredicted RBP9.21□□□□□ -0.94
SMC1A-203ENST00000428014 FZD6O60353 706 aa9.21□□□□□ -0.94
SMC1A-203ENST00000428014 PCDH8O95206 1070 aa9.21□□□□□ -0.94
SMC1A-203ENST00000428014 WNT1P04628 370 aa9.21□□□□□ -0.94
SMC1A-203ENST00000428014 NME1P15531 152 aaKnown RBP9.21□□□□□ -0.94
SMC1A-203ENST00000428014 TGM2P21980 687 aa9.21□□□□□ -0.94
SMC1A-203ENST00000428014 EPHA8P29322 1005 aaPredicted RBP9.21□□□□□ -0.94
SMC1A-203ENST00000428014 TRIM23P36406 574 aa9.21□□□□□ -0.94
SMC1A-203ENST00000428014 ABL2P42684 1182 aa9.21□□□□□ -0.94
SMC1A-203ENST00000428014 MMP13P45452 471 aa9.21□□□□□ -0.94
SMC1A-203ENST00000428014 BLKP51451 505 aa9.21□□□□□ -0.94
SMC1A-203ENST00000428014 DNA2P51530 1060 aa9.21□□□□□ -0.94
SMC1A-203ENST00000428014 VAV2P52735 878 aa9.21□□□□□ -0.94
SMC1A-203ENST00000428014 TAS2R40P59535 323 aa9.21□□□□□ -0.94
SMC1A-203ENST00000428014 HNRNPKP61978 463 aaKnown RBP eCLIP9.21□□□□□ -0.94
SMC1A-203ENST00000428014 DPTQ07507 201 aa9.21□□□□□ -0.94
SMC1A-203ENST00000428014 SLC10A7Q0GE19 358 aa9.21□□□□□ -0.94
SMC1A-203ENST00000428014 MTM1Q13496 603 aa9.21□□□□□ -0.94
SMC1A-203ENST00000428014 TFDP3Q5H9I0 405 aa9.21□□□□□ -0.94
SMC1A-203ENST00000428014 DPPA4Q7L190 304 aa9.21□□□□□ -0.94
SMC1A-203ENST00000428014 KANSL1Q7Z3B3 1105 aa9.21□□□□□ -0.94
SMC1A-203ENST00000428014 GAS2L3Q86XJ1 694 aa9.21□□□□□ -0.94
SMC1A-203ENST00000428014 RCOR2Q8IZ40 523 aa9.21□□□□□ -0.94
SMC1A-203ENST00000428014 RNF10Q8N5U6 811 aaKnown RBP9.21□□□□□ -0.94
SMC1A-203ENST00000428014 DEFB119Q8N690 84 aa9.21□□□□□ -0.94
SMC1A-203ENST00000428014 PQLC3Q8N755 202 aa9.21□□□□□ -0.94
SMC1A-203ENST00000428014 PLD5Q8N7P1 536 aa9.21□□□□□ -0.94
SMC1A-203ENST00000428014 FAM181AQ8N9Y4 354 aa9.21□□□□□ -0.94
SMC1A-203ENST00000428014 CCDC112Q8NEF3 446 aa9.21□□□□□ -0.94
SMC1A-203ENST00000428014 EXD1Q8NHP7 514 aa9.21□□□□□ -0.94
SMC1A-203ENST00000428014 DTX3LQ8TDB6 740 aa9.21□□□□□ -0.94
SMC1A-203ENST00000428014 CXorf40AQ8TE69 158 aa9.21□□□□□ -0.94
SMC1A-203ENST00000428014 ADAMTS14Q8WXS8 1223 aa9.21□□□□□ -0.94
SMC1A-203ENST00000428014 SCRN2Q96FV2 425 aa9.21□□□□□ -0.94
SMC1A-203ENST00000428014 RBM41Q96IZ5 413 aaKnown RBP9.21□□□□□ -0.94
SMC1A-203ENST00000428014 CELF6Q96J87 481 aaKnown RBP9.21□□□□□ -0.94
SMC1A-203ENST00000428014 IL12RB2Q99665 862 aa9.21□□□□□ -0.94
SMC1A-203ENST00000428014 DUSP23Q9BVJ7 150 aa9.21□□□□□ -0.94
SMC1A-203ENST00000428014 TMUB1Q9BVT8 246 aa9.21□□□□□ -0.94
SMC1A-203ENST00000428014 GTPBP2Q9BX10 602 aaKnown RBP9.21□□□□□ -0.94
SMC1A-203ENST00000428014 CALN1Q9BXU9 219 aa9.21□□□□□ -0.94
SMC1A-203ENST00000428014 AASDHPPTQ9NRN7 309 aa9.21□□□□□ -0.94
SMC1A-203ENST00000428014 SPTLC3Q9NUV7 552 aa9.21□□□□□ -0.94
SMC1A-203ENST00000428014 ETNK2Q9NVF9 386 aa9.21□□□□□ -0.94
SMC1A-203ENST00000428014 EVA1BQ9NVM1 165 aa9.21□□□□□ -0.94
SMC1A-203ENST00000428014 DTLQ9NZJ0 730 aa9.21□□□□□ -0.94
SMC1A-203ENST00000428014 FNDC3AQ9Y2H6 1198 aaKnown RBP9.21□□□□□ -0.94
SMC1A-203ENST00000428014 NEUROG3Q9Y4Z2 214 aa9.21□□□□□ -0.94
SMC1A-203ENST00000428014 ALG6Q9Y672 507 aa9.21□□□□□ -0.94
SMC1A-203ENST00000428014 GOLGA4Q13439 2230 aaKnown RBP9.2□□□□□ -0.94
SMC1A-203ENST00000428014 FAM47DPA6NHR8 397 aa9.2□□□□□ -0.94
SMC1A-203ENST00000428014 MIF4GDA9UHW6 222 aaKnown RBP9.2□□□□□ -0.94
SMC1A-203ENST00000428014 HACD1B0YJ81 288 aa9.2□□□□□ -0.94
SMC1A-203ENST00000428014 H0Y8X5 98 aa9.2□□□□□ -0.94
SMC1A-203ENST00000428014 PDE2AO00408 941 aaPredicted RBP9.2□□□□□ -0.94
SMC1A-203ENST00000428014 TNFRSF10CO14798 259 aa9.2□□□□□ -0.94
SMC1A-203ENST00000428014 BNIP3LO60238 219 aa9.2□□□□□ -0.94
SMC1A-203ENST00000428014 BUB1BO60566 1050 aaPredicted RBP9.2□□□□□ -0.94
SMC1A-203ENST00000428014 ZRANB2O95218 330 aaKnown RBP eCLIP9.2□□□□□ -0.94
SMC1A-203ENST00000428014 EPOP01588 193 aa9.2□□□□□ -0.94
SMC1A-203ENST00000428014 CSF2P04141 144 aa9.2□□□□□ -0.94
SMC1A-203ENST00000428014 THEGLP0DJG4 465 aa9.2□□□□□ -0.94
SMC1A-203ENST00000428014 XPAP23025 273 aaPredicted RBP9.2□□□□□ -0.94
SMC1A-203ENST00000428014 KELP23276 732 aa9.2□□□□□ -0.94
SMC1A-203ENST00000428014 CTNNA1P35221 906 aaKnown RBP9.2□□□□□ -0.94
SMC1A-203ENST00000428014 XRCC4Q13426 336 aa9.2□□□□□ -0.94
SMC1A-203ENST00000428014 MESDQ14696 234 aa9.2□□□□□ -0.94
SMC1A-203ENST00000428014 TRIP6Q15654 476 aaKnown RBP9.2□□□□□ -0.94
SMC1A-203ENST00000428014 CFAP58Q5T655 872 aa9.2□□□□□ -0.94
SMC1A-203ENST00000428014 ATXN7L2Q5T6C5 722 aaPredicted RBP9.2□□□□□ -0.94
SMC1A-203ENST00000428014 LVRNQ6Q4G3 990 aa9.2□□□□□ -0.94
SMC1A-203ENST00000428014 MACC1Q6ZN28 852 aa9.2□□□□□ -0.94
SMC1A-203ENST00000428014 GCNT7Q6ZNI0 430 aa9.2□□□□□ -0.94
SMC1A-203ENST00000428014 ZNF765Q7L2R6 523 aa9.2□□□□□ -0.94
SMC1A-203ENST00000428014 PARGQ86W56 976 aa9.2□□□□□ -0.94
SMC1A-203ENST00000428014 TMEM139Q8IV31 216 aa9.2□□□□□ -0.94
SMC1A-203ENST00000428014 SYCE1Q8N0S2 351 aa9.2□□□□□ -0.94
SMC1A-203ENST00000428014 RYBPQ8N488 228 aaPredicted RBP9.2□□□□□ -0.94
SMC1A-203ENST00000428014 TPCN2Q8NHX9 752 aa9.2□□□□□ -0.94
SMC1A-203ENST00000428014 RAPGEF5Q92565 580 aa9.2□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms