RNA–Protein interactions for RNA: ENST00000426155.6

SNX3-204, Transcript of sorting nexin 3, humanhuman

TSL 1 (best) BASIC

Gene SNX3, Length 1,072 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3-204ENST00000426155 HLA-DQB2P05538 268 aa13.72□□□□□ -0.21
SNX3-204ENST00000426155 KRT10P13645 584 aa13.72□□□□□ -0.21
SNX3-204ENST00000426155 C6P13671 934 aa13.72□□□□□ -0.21
SNX3-204ENST00000426155 LIG3P49916 1009 aa13.72□□□□□ -0.21
SNX3-204ENST00000426155 DSC2Q02487 901 aa13.72□□□□□ -0.21
SNX3-204ENST00000426155 ADCY2Q08462 1091 aa13.72□□□□□ -0.21
SNX3-204ENST00000426155 ELP6Q0PNE2 266 aa13.72□□□□□ -0.21
SNX3-204ENST00000426155 RALGDSQ12967 914 aa13.72□□□□□ -0.21
SNX3-204ENST00000426155 SGCGQ13326 291 aa13.72□□□□□ -0.21
SNX3-204ENST00000426155 TRIP6Q15654 476 aaKnown RBP13.72□□□□□ -0.21
SNX3-204ENST00000426155 IFI16Q16666 785 aaKnown RBP13.72□□□□□ -0.21
SNX3-204ENST00000426155 TMEM52BQ4KMG9 183 aa13.72□□□□□ -0.21
SNX3-204ENST00000426155 ZNF542PQ5EBM4 170 aa13.72□□□□□ -0.21
SNX3-204ENST00000426155 LRRC38Q5VT99 294 aa13.72□□□□□ -0.21
SNX3-204ENST00000426155 SLC9A4Q6AI14 798 aa13.72□□□□□ -0.21
SNX3-204ENST00000426155 BRAT1Q6PJG6 821 aa13.72□□□□□ -0.21
SNX3-204ENST00000426155 KYAT3Q6YP21 454 aaKnown RBP13.72□□□□□ -0.21
SNX3-204ENST00000426155 RFX6Q8HWS3 928 aa13.72□□□□□ -0.21
SNX3-204ENST00000426155 TEX26Q8N6G2 289 aa13.72□□□□□ -0.21
SNX3-204ENST00000426155 PNPLA1Q8N8W4 532 aa13.72□□□□□ -0.21
SNX3-204ENST00000426155 TPCN2Q8NHX9 752 aa13.72□□□□□ -0.21
SNX3-204ENST00000426155 TRAF3IP1Q8TDR0 691 aaPredicted RBP13.72□□□□□ -0.21
SNX3-204ENST00000426155 RHBDD1Q8TEB9 315 aa13.72□□□□□ -0.21
SNX3-204ENST00000426155 NSMCE1Q8WV22 266 aa13.72□□□□□ -0.21
SNX3-204ENST00000426155 MAML1Q92585 1016 aa13.72□□□□□ -0.21
SNX3-204ENST00000426155 KRT35Q92764 455 aa13.72□□□□□ -0.21
SNX3-204ENST00000426155 SMIM14Q96QK8 99 aa13.72□□□□□ -0.21
SNX3-204ENST00000426155 CEP41Q9BYV8 373 aa13.72□□□□□ -0.21
SNX3-204ENST00000426155 GPR27Q9NS67 375 aa13.72□□□□□ -0.21
SNX3-204ENST00000426155 PCDHB9Q9Y5E1 797 aa13.72□□□□□ -0.21
SNX3-204ENST00000426155 WDFY3Q8IZQ1 3526 aa13.72□□□□□ -0.21
SNX3-204ENST00000426155 ASPMQ8IZT6 3477 aa13.71□□□□□ -0.21
SNX3-204ENST00000426155 FRYQ5TBA9 3013 aa13.71□□□□□ -0.21
SNX3-204ENST00000426155 A0A0A6YYK5 440 aaPredicted RBP13.71□□□□□ -0.21
SNX3-204ENST00000426155 A0A0U1RQS6 177 aa13.71□□□□□ -0.21
SNX3-204ENST00000426155 FPGTO14772 594 aa13.71□□□□□ -0.21
SNX3-204ENST00000426155 APOL1O14791 398 aa13.71□□□□□ -0.21
SNX3-204ENST00000426155 MATN3O15232 486 aa13.71□□□□□ -0.21
SNX3-204ENST00000426155 PSTPIP1O43586 416 aa13.71□□□□□ -0.21
SNX3-204ENST00000426155 CPP00450 1065 aa13.71□□□□□ -0.21
SNX3-204ENST00000426155 ITGAVP06756 1048 aa13.71□□□□□ -0.21
SNX3-204ENST00000426155 HSPA9P38646 679 aaKnown RBP13.71□□□□□ -0.21
SNX3-204ENST00000426155 CDKN2BP42772 138 aa13.71□□□□□ -0.21
SNX3-204ENST00000426155 ARRB1P49407 418 aaPredicted RBP13.71□□□□□ -0.21
SNX3-204ENST00000426155 ITKQ08881 620 aa13.71□□□□□ -0.21
SNX3-204ENST00000426155 OVGP1Q12889 678 aa13.71□□□□□ -0.21
SNX3-204ENST00000426155 ZBTB17Q13105 803 aa13.71□□□□□ -0.21
SNX3-204ENST00000426155 HNRNPDQ14103 355 aaKnown RBP13.71□□□□□ -0.21
SNX3-204ENST00000426155 IRF4Q15306 451 aa13.71□□□□□ -0.21
SNX3-204ENST00000426155 KAZNQ674X7 775 aa13.71□□□□□ -0.21
SNX3-204ENST00000426155 C11orf63Q6NUN7 778 aa13.71□□□□□ -0.21
SNX3-204ENST00000426155 ERAP2Q6P179 960 aa13.71□□□□□ -0.21
SNX3-204ENST00000426155 NYAP1Q6ZVC0 841 aa13.71□□□□□ -0.21
SNX3-204ENST00000426155 KANSL1Q7Z3B3 1105 aa13.71□□□□□ -0.21
SNX3-204ENST00000426155 BBS5Q8N3I7 341 aa13.71□□□□□ -0.21
SNX3-204ENST00000426155 TP53I13Q8NBR0 393 aaPredicted RBP13.71□□□□□ -0.21
SNX3-204ENST00000426155 CCNYQ8ND76 341 aa13.71□□□□□ -0.21
SNX3-204ENST00000426155 HCAR2Q8TDS4 363 aa13.71□□□□□ -0.21
SNX3-204ENST00000426155 CENPTQ96BT3 561 aa13.71□□□□□ -0.21
SNX3-204ENST00000426155 HDAC11Q96DB2 347 aa13.71□□□□□ -0.21
SNX3-204ENST00000426155 LENG8Q96PV6 779 aaPredicted RBP13.71□□□□□ -0.21
SNX3-204ENST00000426155 SEMA3CQ99985 751 aa13.71□□□□□ -0.21
SNX3-204ENST00000426155 ERVMER34-1Q9H9K5 563 aa13.71□□□□□ -0.21
SNX3-204ENST00000426155 RBM22Q9NW64 420 aaKnown RBP eCLIP13.71□□□□□ -0.21
SNX3-204ENST00000426155 UCKL1Q9NWZ5 548 aa13.71□□□□□ -0.21
SNX3-204ENST00000426155 DDX56Q9NY93 547 aaKnown RBP13.71□□□□□ -0.21
SNX3-204ENST00000426155 SAE1Q9UBE0 346 aaPredicted RBP13.71□□□□□ -0.21
SNX3-204ENST00000426155 TRIM10Q9UDY6 481 aa13.71□□□□□ -0.21
SNX3-204ENST00000426155 PNMA8BQ9ULN7 279 aaPredicted RBP13.71□□□□□ -0.21
SNX3-204ENST00000426155 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP13.7□□□□□ -0.22
SNX3-204ENST00000426155 HTRA2O43464 458 aaPredicted RBP13.7□□□□□ -0.22
SNX3-204ENST00000426155 HYAL3O43820 417 aaPredicted RBP13.7□□□□□ -0.22
SNX3-204ENST00000426155 DFNA5O60443 496 aa13.7□□□□□ -0.22
SNX3-204ENST00000426155 MAGEC1O60732 1142 aa13.7□□□□□ -0.22
SNX3-204ENST00000426155 SOCS5O75159 536 aa13.7□□□□□ -0.22
SNX3-204ENST00000426155 PDHA1P08559 390 aa13.7□□□□□ -0.22
SNX3-204ENST00000426155 ATXN1LP0C7T5 689 aaKnown RBP13.7□□□□□ -0.22
SNX3-204ENST00000426155 FTH1P19P0C7X4 201 aa13.7□□□□□ -0.22
SNX3-204ENST00000426155 CCNB1P14635 433 aa13.7□□□□□ -0.22
SNX3-204ENST00000426155 PECAM1P16284 738 aaPredicted RBP13.7□□□□□ -0.22
SNX3-204ENST00000426155 GM2AP17900 193 aa13.7□□□□□ -0.22
SNX3-204ENST00000426155 MX2P20592 715 aa13.7□□□□□ -0.22
SNX3-204ENST00000426155 CCNCP24863 283 aa13.7□□□□□ -0.22
SNX3-204ENST00000426155 GRK6P43250 576 aa13.7□□□□□ -0.22
SNX3-204ENST00000426155 VAV2P52735 878 aa13.7□□□□□ -0.22
SNX3-204ENST00000426155 PPIDQ08752 370 aaKnown RBP13.7□□□□□ -0.22
SNX3-204ENST00000426155 NIPAL4Q0D2K0 466 aa13.7□□□□□ -0.22
SNX3-204ENST00000426155 PDE1CQ14123 709 aaPredicted RBP13.7□□□□□ -0.22
SNX3-204ENST00000426155 FZD2Q14332 565 aa13.7□□□□□ -0.22
SNX3-204ENST00000426155 SUZ12Q15022 739 aaKnown RBP13.7□□□□□ -0.22
SNX3-204ENST00000426155 ODF2Q5BJF6 829 aa13.7□□□□□ -0.22
SNX3-204ENST00000426155 TIGD7Q6NT04 549 aaPredicted RBP13.7□□□□□ -0.22
SNX3-204ENST00000426155 SPOCD1Q6ZMY3 1216 aa13.7□□□□□ -0.22
SNX3-204ENST00000426155 DPPA4Q7L190 304 aa13.7□□□□□ -0.22
SNX3-204ENST00000426155 DAAM2Q86T65 1068 aa13.7□□□□□ -0.22
SNX3-204ENST00000426155 SLCO6A1Q86UG4 719 aa13.7□□□□□ -0.22
SNX3-204ENST00000426155 LRRC49Q8IUZ0 686 aa13.7□□□□□ -0.22
SNX3-204ENST00000426155 CCDC13Q8IYE1 715 aa13.7□□□□□ -0.22
SNX3-204ENST00000426155 EID2Q8N6I1 236 aa13.7□□□□□ -0.22
SNX3-204ENST00000426155 DENND6BQ8NEG7 585 aa13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms