RNA–Protein interactions for RNA: ENST00000425436.7

SHOX2-202, Transcript of short stature homeobox 2, humanhuman

TSL 5 BASIC

Gene SHOX2, Length 1,513 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-202ENST00000425436 E2F5Q15329 346 aa15.78■□□□□ 0.12
SHOX2-202ENST00000425436 PID1Q7Z2X4 250 aa15.78■□□□□ 0.12
SHOX2-202ENST00000425436 MAML2Q8IZL2 1156 aaPredicted RBP15.78■□□□□ 0.12
SHOX2-202ENST00000425436 SGSM3Q96HU1 749 aa15.78■□□□□ 0.12
SHOX2-202ENST00000425436 TSGA13Q96PP4 275 aa15.78■□□□□ 0.12
SHOX2-202ENST00000425436 SMC6Q96SB8 1091 aa15.78■□□□□ 0.12
SHOX2-202ENST00000425436 CCT8L2Q96SF2 557 aa15.78■□□□□ 0.12
SHOX2-202ENST00000425436 EBNA1BP2Q99848 306 aaKnown RBP15.78■□□□□ 0.12
SHOX2-202ENST00000425436 TNKS2Q9H2K2 1166 aa15.78■□□□□ 0.12
SHOX2-202ENST00000425436 KCNK9Q9NPC2 374 aa15.78■□□□□ 0.12
SHOX2-202ENST00000425436 PPANQ9NQ55 473 aaKnown RBP15.78■□□□□ 0.12
SHOX2-202ENST00000425436 KLHL8Q9P2G9 620 aaPredicted RBP15.78■□□□□ 0.12
SHOX2-202ENST00000425436 CHMP2BQ9UQN3 213 aa15.78■□□□□ 0.12
SHOX2-202ENST00000425436 HS3ST2Q9Y278 367 aa15.78■□□□□ 0.12
SHOX2-202ENST00000425436 IQANK1A0A1B0GTG1 560 aa15.78■□□□□ 0.12
SHOX2-202ENST00000425436 SDR42E2A6NKP2 422 aa15.78■□□□□ 0.12
SHOX2-202ENST00000425436 EBAG9O00559 213 aa15.78■□□□□ 0.12
SHOX2-202ENST00000425436 ATP9BO43861 1147 aa15.78■□□□□ 0.12
SHOX2-202ENST00000425436 PRAMEF11O60813 436 aa15.78■□□□□ 0.12
SHOX2-202ENST00000425436 SIN3BO75182 1162 aa15.78■□□□□ 0.12
SHOX2-202ENST00000425436 CPP00450 1065 aa15.78■□□□□ 0.12
SHOX2-202ENST00000425436 GCAP28676 217 aa15.78■□□□□ 0.12
SHOX2-202ENST00000425436 SERPINH1P50454 418 aaKnown RBP15.78■□□□□ 0.12
SHOX2-202ENST00000425436 CSTF1Q05048 431 aaKnown RBP15.78■□□□□ 0.12
SHOX2-202ENST00000425436 PRPSAP1Q14558 356 aa15.78■□□□□ 0.12
SHOX2-202ENST00000425436 TMED2Q15363 201 aa15.78■□□□□ 0.12
SHOX2-202ENST00000425436 HNRNPA1L2Q32P51 320 aaKnown RBP15.78■□□□□ 0.12
SHOX2-202ENST00000425436 TEX44Q53QW1 395 aa15.78■□□□□ 0.12
SHOX2-202ENST00000425436 FAM182AQ5T1J6 154 aa15.78■□□□□ 0.12
SHOX2-202ENST00000425436 MAMSTRQ6ZN01 415 aa15.78■□□□□ 0.12
SHOX2-202ENST00000425436 TRABD2AQ86V40 505 aa15.78■□□□□ 0.12
SHOX2-202ENST00000425436 ZNF567Q8N184 647 aa15.78■□□□□ 0.12
SHOX2-202ENST00000425436 FRS2Q8WU20 508 aa15.78■□□□□ 0.12
SHOX2-202ENST00000425436 PTPRN2Q92932 1015 aa15.78■□□□□ 0.12
SHOX2-202ENST00000425436 CHMP6Q96FZ7 201 aa15.78■□□□□ 0.12
SHOX2-202ENST00000425436 IER2Q9BTL4 223 aa15.78■□□□□ 0.12
SHOX2-202ENST00000425436 SLC6A17Q9H1V8 727 aa15.78■□□□□ 0.12
SHOX2-202ENST00000425436 SP110Q9HB58 689 aa15.78■□□□□ 0.12
SHOX2-202ENST00000425436 PDFQ9HBH1 243 aa15.78■□□□□ 0.12
SHOX2-202ENST00000425436 PRSS16Q9NQE7 514 aa15.78■□□□□ 0.12
SHOX2-202ENST00000425436 SUN2Q9UH99 717 aa15.78■□□□□ 0.12
SHOX2-202ENST00000425436 TBK1Q9UHD2 729 aa15.78■□□□□ 0.12
SHOX2-202ENST00000425436 TCRBV21S2A2A0A5A6 115 aa15.77■□□□□ 0.11
SHOX2-202ENST00000425436 TMEM120BA0PK00 339 aa15.77■□□□□ 0.11
SHOX2-202ENST00000425436 PRPF4O43172 522 aaKnown RBP eCLIP15.77■□□□□ 0.11
SHOX2-202ENST00000425436 MAFKO60675 156 aa15.77■□□□□ 0.11
SHOX2-202ENST00000425436 ZNF821O75541 412 aaPredicted RBP15.77■□□□□ 0.11
SHOX2-202ENST00000425436 SLC20A2Q08357 652 aa15.77■□□□□ 0.11
SHOX2-202ENST00000425436 C9orf64Q5T6V5 341 aa15.77■□□□□ 0.11
SHOX2-202ENST00000425436 FAXCQ5TGI0 409 aa15.77■□□□□ 0.11
SHOX2-202ENST00000425436 TIGD7Q6NT04 549 aaPredicted RBP15.77■□□□□ 0.11
SHOX2-202ENST00000425436 Q6ZVU0 165 aa15.77■□□□□ 0.11
SHOX2-202ENST00000425436 MICALCLQ6ZW33 695 aa15.77■□□□□ 0.11
SHOX2-202ENST00000425436 SRRM1Q8IYB3 904 aaKnown RBP15.77■□□□□ 0.11
SHOX2-202ENST00000425436 CYP4X1Q8N118 509 aa15.77■□□□□ 0.11
SHOX2-202ENST00000425436 ATPAF2Q8N5M1 289 aa15.77■□□□□ 0.11
SHOX2-202ENST00000425436 KDM1BQ8NB78 822 aa15.77■□□□□ 0.11
SHOX2-202ENST00000425436 MDM1Q8TC05 714 aa15.77■□□□□ 0.11
SHOX2-202ENST00000425436 HMGB4Q8WW32 186 aa15.77■□□□□ 0.11
SHOX2-202ENST00000425436 DYDC1Q8WWB3 177 aa15.77■□□□□ 0.11
SHOX2-202ENST00000425436 SIGLEC10Q96LC7 697 aa15.77■□□□□ 0.11
SHOX2-202ENST00000425436 WDR83Q9BRX9 315 aaKnown RBP15.77■□□□□ 0.11
SHOX2-202ENST00000425436 FAM107BQ9H098 131 aa15.77■□□□□ 0.11
SHOX2-202ENST00000425436 CD248Q9HCU0 757 aa15.77■□□□□ 0.11
SHOX2-202ENST00000425436 SEPT10Q9P0V9 454 aa15.77■□□□□ 0.11
SHOX2-202ENST00000425436 UBA2Q9UBT2 640 aaPredicted RBP15.77■□□□□ 0.11
SHOX2-202ENST00000425436 CTNNAL1Q9UBT7 734 aa15.77■□□□□ 0.11
SHOX2-202ENST00000425436 ZNF180Q9UJW8 692 aa15.77■□□□□ 0.11
SHOX2-202ENST00000425436 CKAP5Q14008 2032 aa15.77■□□□□ 0.11
SHOX2-202ENST00000425436 ZNF318Q5VUA4 2279 aa15.76■□□□□ 0.11
SHOX2-202ENST00000425436 EDDM13A0A1B0GTR0 161 aa15.76■□□□□ 0.11
SHOX2-202ENST00000425436 TCRBV9S1A1TA0A576 114 aa15.76■□□□□ 0.11
SHOX2-202ENST00000425436 FAM47DPA6NHR8 397 aa15.76■□□□□ 0.11
SHOX2-202ENST00000425436 K7ESF4 209 aa15.76■□□□□ 0.11
SHOX2-202ENST00000425436 BANF1O75531 89 aa15.76■□□□□ 0.11
SHOX2-202ENST00000425436 SUN1O94901 812 aa15.76■□□□□ 0.11
SHOX2-202ENST00000425436 INHBAP08476 426 aa15.76■□□□□ 0.11
SHOX2-202ENST00000425436 PTPN3P26045 913 aa15.76■□□□□ 0.11
SHOX2-202ENST00000425436 VASPP50552 380 aaPredicted RBP15.76■□□□□ 0.11
SHOX2-202ENST00000425436 DGKEP52429 567 aa15.76■□□□□ 0.11
SHOX2-202ENST00000425436 IL10RBQ08334 325 aa15.76■□□□□ 0.11
SHOX2-202ENST00000425436 DMWDQ09019 674 aa15.76■□□□□ 0.11
SHOX2-202ENST00000425436 STARD3Q14849 445 aa15.76■□□□□ 0.11
SHOX2-202ENST00000425436 CYTH1Q15438 398 aa15.76■□□□□ 0.11
SHOX2-202ENST00000425436 ANO7Q6IWH7 933 aa15.76■□□□□ 0.11
SHOX2-202ENST00000425436 ZNF449Q6P9G9 518 aa15.76■□□□□ 0.11
SHOX2-202ENST00000425436 CAPN12Q6ZSI9 719 aa15.76■□□□□ 0.11
SHOX2-202ENST00000425436 SLC26A11Q86WA9 606 aa15.76■□□□□ 0.11
SHOX2-202ENST00000425436 CACUL1Q86Y37 369 aa15.76■□□□□ 0.11
SHOX2-202ENST00000425436 STK40Q8N2I9 435 aa15.76■□□□□ 0.11
SHOX2-202ENST00000425436 TSTD1Q8NFU3 115 aa15.76■□□□□ 0.11
SHOX2-202ENST00000425436 GSDMBQ8TAX9 411 aa15.76■□□□□ 0.11
SHOX2-202ENST00000425436 PAFAH2Q99487 392 aa15.76■□□□□ 0.11
SHOX2-202ENST00000425436 POLMQ9NP87 494 aaPredicted RBP15.76■□□□□ 0.11
SHOX2-202ENST00000425436 MAGEB16A2A368 324 aa15.75■□□□□ 0.11
SHOX2-202ENST00000425436 TMCC1O94876 653 aa15.75■□□□□ 0.11
SHOX2-202ENST00000425436 PEX11BO96011 259 aa15.75■□□□□ 0.11
SHOX2-202ENST00000425436 HNRNPH2P55795 449 aaKnown RBP15.75■□□□□ 0.11
SHOX2-202ENST00000425436 SLC10A7Q0GE19 358 aa15.75■□□□□ 0.11
SHOX2-202ENST00000425436 CAMK2GQ13555 558 aaPredicted RBP15.75■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms