RNA–Protein interactions for RNA: ENST00000425244.6

CUX1-205, Transcript of cut like homeobox 1, humanhuman

TSL 2 BASIC

Gene CUX1, Length 2,776 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-205ENST00000425244 GLDCP23378 1020 aa10.76□□□□□ -0.69
CUX1-205ENST00000425244 ARNTP27540 789 aa10.76□□□□□ -0.69
CUX1-205ENST00000425244 PEX2P28328 305 aa10.76□□□□□ -0.69
CUX1-205ENST00000425244 TAS2R39P59534 338 aa10.76□□□□□ -0.69
CUX1-205ENST00000425244 FPGSQ05932 587 aa10.76□□□□□ -0.69
CUX1-205ENST00000425244 DUSP4Q13115 394 aa10.76□□□□□ -0.69
CUX1-205ENST00000425244 PRKAA1Q13131 559 aa10.76□□□□□ -0.69
CUX1-205ENST00000425244 LBRQ14739 615 aaKnown RBP10.76□□□□□ -0.69
CUX1-205ENST00000425244 DENND5AQ6IQ26 1287 aa10.76□□□□□ -0.69
CUX1-205ENST00000425244 PGM2L1Q6PCE3 622 aa10.76□□□□□ -0.69
CUX1-205ENST00000425244 RNF111Q6ZNA4 994 aa10.76□□□□□ -0.69
CUX1-205ENST00000425244 SDCCAG8Q86SQ7 713 aaPredicted RBP10.76□□□□□ -0.69
CUX1-205ENST00000425244 C14orf80Q86SX3 495 aa10.76□□□□□ -0.69
CUX1-205ENST00000425244 TMEM151AQ8N4L1 468 aa10.76□□□□□ -0.69
CUX1-205ENST00000425244 RNF148Q8N7C7 305 aa10.76□□□□□ -0.69
CUX1-205ENST00000425244 SPDYE1Q8NFV5 336 aaPredicted RBP10.76□□□□□ -0.69
CUX1-205ENST00000425244 GDPD5Q8WTR4 605 aa10.76□□□□□ -0.69
CUX1-205ENST00000425244 TSGA13Q96PP4 275 aa10.76□□□□□ -0.69
CUX1-205ENST00000425244 ZCWPW1Q9H0M4 648 aa10.76□□□□□ -0.69
CUX1-205ENST00000425244 EBF3Q9H4W6 596 aa10.76□□□□□ -0.69
CUX1-205ENST00000425244 CYP4F12Q9HCS2 524 aa10.76□□□□□ -0.69
CUX1-205ENST00000425244 LMCD1Q9NZU5 365 aa10.76□□□□□ -0.69
CUX1-205ENST00000425244 ADAMTS6Q9UKP5 1117 aa10.76□□□□□ -0.69
CUX1-205ENST00000425244 CDYLQ9Y232 598 aa10.76□□□□□ -0.69
CUX1-205ENST00000425244 TCAF1Q9Y4C2 921 aa10.76□□□□□ -0.69
CUX1-205ENST00000425244 MAGEA13PA6NCF6 341 aa10.75□□□□□ -0.69
CUX1-205ENST00000425244 NEMP2A6NFY4 417 aa10.75□□□□□ -0.69
CUX1-205ENST00000425244 MATN3O15232 486 aa10.75□□□□□ -0.69
CUX1-205ENST00000425244 SMIM24O75264 130 aa10.75□□□□□ -0.69
CUX1-205ENST00000425244 FGFR3P22607 806 aa10.75□□□□□ -0.69
CUX1-205ENST00000425244 OR1D2P34982 312 aa10.75□□□□□ -0.69
CUX1-205ENST00000425244 PAPOLAP51003 745 aaKnown RBP10.75□□□□□ -0.69
CUX1-205ENST00000425244 GEMP55040 296 aa10.75□□□□□ -0.69
CUX1-205ENST00000425244 MAXP61244 160 aa10.75□□□□□ -0.69
CUX1-205ENST00000425244 DLG1Q12959 904 aa10.75□□□□□ -0.69
CUX1-205ENST00000425244 AAGABQ6PD74 315 aa10.75□□□□□ -0.69
CUX1-205ENST00000425244 RDH11Q8TC12 318 aa10.75□□□□□ -0.69
CUX1-205ENST00000425244 STYXQ8WUJ0 223 aa10.75□□□□□ -0.69
CUX1-205ENST00000425244 RCN3Q96D15 328 aa10.75□□□□□ -0.69
CUX1-205ENST00000425244 RTKNQ9BST9 563 aa10.75□□□□□ -0.69
CUX1-205ENST00000425244 VN1R3Q9BXE9 311 aa10.75□□□□□ -0.69
CUX1-205ENST00000425244 CRISPLD1Q9H336 500 aa10.75□□□□□ -0.69
CUX1-205ENST00000425244 ARHGEF38Q9NXL2 777 aa10.75□□□□□ -0.69
CUX1-205ENST00000425244 GTSE1Q9NYZ3 720 aa10.75□□□□□ -0.69
CUX1-205ENST00000425244 A0A1W2PQH9 124 aa10.75□□□□□ -0.69
CUX1-205ENST00000425244 TTC24A2A3L6 582 aaPredicted RBP10.75□□□□□ -0.69
CUX1-205ENST00000425244 E9PAM4 449 aa10.75□□□□□ -0.69
CUX1-205ENST00000425244 FGF10O15520 208 aaPredicted RBP10.75□□□□□ -0.69
CUX1-205ENST00000425244 GRID2O43424 1007 aa10.75□□□□□ -0.69
CUX1-205ENST00000425244 BUD23O43709 281 aaKnown RBP10.75□□□□□ -0.69
CUX1-205ENST00000425244 THRAP10827 490 aa10.75□□□□□ -0.69
CUX1-205ENST00000425244 ENO3P13929 434 aaPredicted RBP10.75□□□□□ -0.69
CUX1-205ENST00000425244 ARCN1P48444 511 aaKnown RBP10.75□□□□□ -0.69
CUX1-205ENST00000425244 CD151P48509 253 aa10.75□□□□□ -0.69
CUX1-205ENST00000425244 PKNOX1P55347 436 aa10.75□□□□□ -0.69
CUX1-205ENST00000425244 CSHL1Q14406 222 aa10.75□□□□□ -0.69
CUX1-205ENST00000425244 USP41Q3LFD5 358 aa10.75□□□□□ -0.69
CUX1-205ENST00000425244 METTL21CQ5VZV1 264 aa10.75□□□□□ -0.69
CUX1-205ENST00000425244 PHC3Q8NDX5 983 aa10.75□□□□□ -0.69
CUX1-205ENST00000425244 FBXO22Q8NEZ5 403 aa10.75□□□□□ -0.69
CUX1-205ENST00000425244 GIPC2Q8TF65 315 aa10.75□□□□□ -0.69
CUX1-205ENST00000425244 USP13Q92995 863 aaPredicted RBP10.75□□□□□ -0.69
CUX1-205ENST00000425244 PABPC5Q96DU9 382 aaKnown RBP10.75□□□□□ -0.69
CUX1-205ENST00000425244 CCDC97Q96F63 343 aaPredicted RBP10.75□□□□□ -0.69
CUX1-205ENST00000425244 ZNF558Q96NG5 402 aa10.75□□□□□ -0.69
CUX1-205ENST00000425244 IL12RB2Q99665 862 aa10.75□□□□□ -0.69
CUX1-205ENST00000425244 TMEM175Q9BSA9 504 aa10.75□□□□□ -0.69
CUX1-205ENST00000425244 NMUR1Q9HB89 426 aa10.75□□□□□ -0.69
CUX1-205ENST00000425244 ABCC13Q9NSE7 274 aa10.75□□□□□ -0.69
CUX1-205ENST00000425244 IPO11Q9UI26 975 aaKnown RBP10.75□□□□□ -0.69
CUX1-205ENST00000425244 PCDHB5Q9Y5E4 795 aa10.75□□□□□ -0.69
CUX1-205ENST00000425244 CCL22O00626 93 aa10.74□□□□□ -0.69
CUX1-205ENST00000425244 TXNDC9O14530 226 aa10.74□□□□□ -0.69
CUX1-205ENST00000425244 IGLV3-25P01717 112 aa10.74□□□□□ -0.69
CUX1-205ENST00000425244 HNRNPLP14866 589 aaKnown RBP eCLIP10.74□□□□□ -0.696e-8■■■■■ 28.9
CUX1-205ENST00000425244 PAMP19021 973 aa10.74□□□□□ -0.69
CUX1-205ENST00000425244 CRABP2P29373 138 aa10.74□□□□□ -0.69
CUX1-205ENST00000425244 PRDX6P30041 224 aa10.74□□□□□ -0.69
CUX1-205ENST00000425244 PLK1P53350 603 aa10.74□□□□□ -0.69
CUX1-205ENST00000425244 WNT3AP56704 352 aa10.74□□□□□ -0.69
CUX1-205ENST00000425244 CYLC2Q14093 348 aaPredicted RBP10.74□□□□□ -0.69
CUX1-205ENST00000425244 PSMD5Q16401 504 aa10.74□□□□□ -0.69
CUX1-205ENST00000425244 GRAMD1BQ3KR37 738 aa10.74□□□□□ -0.69
CUX1-205ENST00000425244 SFT2D3Q587I9 215 aa10.74□□□□□ -0.69
CUX1-205ENST00000425244 BRMS1LQ5PSV4 323 aa10.74□□□□□ -0.69
CUX1-205ENST00000425244 SH2D4BQ5SQS7 431 aa10.74□□□□□ -0.69
CUX1-205ENST00000425244 RBM20Q5T481 1227 aaKnown RBP10.74□□□□□ -0.69
CUX1-205ENST00000425244 NEPROQ6NW34 567 aa10.74□□□□□ -0.69
CUX1-205ENST00000425244 CNSTQ6PJW8 725 aa10.74□□□□□ -0.69
CUX1-205ENST00000425244 SCD5Q86SK9 330 aa10.74□□□□□ -0.69
CUX1-205ENST00000425244 LSMEM2Q8N112 164 aa10.74□□□□□ -0.69
CUX1-205ENST00000425244 KYQ8NBH2 561 aa10.74□□□□□ -0.69
CUX1-205ENST00000425244 HEXDCQ8WVB3 486 aa10.74□□□□□ -0.69
CUX1-205ENST00000425244 JADE3Q92613 823 aa10.74□□□□□ -0.69
CUX1-205ENST00000425244 KLHL5Q96PQ7 755 aa10.74□□□□□ -0.69
CUX1-205ENST00000425244 HAPLN3Q96S86 360 aa10.74□□□□□ -0.69
CUX1-205ENST00000425244 CDRT15Q96T59 188 aa10.74□□□□□ -0.69
CUX1-205ENST00000425244 TRIM62Q9BVG3 475 aa10.74□□□□□ -0.69
CUX1-205ENST00000425244 UBE2OQ9C0C9 1292 aaKnown RBP10.74□□□□□ -0.69
CUX1-205ENST00000425244 NT5MQ9NPB1 228 aa10.74□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms