RNA–Protein interactions for RNA: ENST00000425072.5

MDC1-205, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 3

Gene MDC1, Length 582 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-205ENST00000425072 ABHD2P08910 425 aa10.4□□□□□ -0.74
MDC1-205ENST00000425072 NUDT17P0C025 328 aa10.4□□□□□ -0.74
MDC1-205ENST00000425072 PGAM1P18669 254 aa10.4□□□□□ -0.74
MDC1-205ENST00000425072 NTSR1P30989 418 aa10.4□□□□□ -0.74
MDC1-205ENST00000425072 GRIA4P48058 902 aa10.4□□□□□ -0.74
MDC1-205ENST00000425072 SUOXP51687 545 aa10.4□□□□□ -0.74
MDC1-205ENST00000425072 SFSWAPQ12872 951 aaKnown RBP10.4□□□□□ -0.74
MDC1-205ENST00000425072 FRG1Q14331 258 aaKnown RBP10.4□□□□□ -0.74
MDC1-205ENST00000425072 ARSIQ5FYB1 569 aa10.4□□□□□ -0.74
MDC1-205ENST00000425072 HP1BP3Q5SSJ5 553 aaPredicted RBP10.4□□□□□ -0.74
MDC1-205ENST00000425072 CERCAMQ5T4B2 595 aa10.4□□□□□ -0.74
MDC1-205ENST00000425072 C9orf64Q5T6V5 341 aa10.4□□□□□ -0.74
MDC1-205ENST00000425072 ZNF449Q6P9G9 518 aa10.4□□□□□ -0.74
MDC1-205ENST00000425072 BRAT1Q6PJG6 821 aa10.4□□□□□ -0.74
MDC1-205ENST00000425072 LRIG3Q6UXM1 1119 aa10.4□□□□□ -0.74
MDC1-205ENST00000425072 Q6ZVU0 165 aa10.4□□□□□ -0.74
MDC1-205ENST00000425072 ZNF534Q76KX8 674 aa10.4□□□□□ -0.74
MDC1-205ENST00000425072 TMEM135Q86UB9 458 aa10.4□□□□□ -0.74
MDC1-205ENST00000425072 UBALD2Q8IYN6 164 aa10.4□□□□□ -0.74
MDC1-205ENST00000425072 CHPFQ8IZ52 775 aa10.4□□□□□ -0.74
MDC1-205ENST00000425072 SYNPOQ8N3V7 929 aa10.4□□□□□ -0.74
MDC1-205ENST00000425072 ZNF513Q8N8E2 541 aaPredicted RBP10.4□□□□□ -0.74
MDC1-205ENST00000425072 ATXN2LQ8WWM7 1075 aaKnown RBP10.4□□□□□ -0.74
MDC1-205ENST00000425072 TRIB3Q96RU7 358 aa10.4□□□□□ -0.74
MDC1-205ENST00000425072 C19orf43Q9BQ61 176 aa10.4□□□□□ -0.74
MDC1-205ENST00000425072 ZDHHC6Q9H6R6 413 aa10.4□□□□□ -0.74
MDC1-205ENST00000425072 FBRSQ9HAH7 460 aa10.4□□□□□ -0.74
MDC1-205ENST00000425072 FBRSL1Q9HCM7 1045 aaKnown RBP10.4□□□□□ -0.74
MDC1-205ENST00000425072 NINJ2Q9NZG7 142 aa10.4□□□□□ -0.74
MDC1-205ENST00000425072 DKK3Q9UBP4 350 aa10.4□□□□□ -0.74
MDC1-205ENST00000425072 SOX13Q9UN79 622 aa10.4□□□□□ -0.74
MDC1-205ENST00000425072 DUSP12Q9UNI6 340 aa10.4□□□□□ -0.74
MDC1-205ENST00000425072 CHMP2BQ9UQN3 213 aa10.4□□□□□ -0.74
MDC1-205ENST00000425072 PPIL1Q9Y3C6 166 aa10.4□□□□□ -0.74
MDC1-205ENST00000425072 STON1Q9Y6Q2 735 aa10.4□□□□□ -0.74
MDC1-205ENST00000425072 RPS6KL1Q9Y6S9 549 aa10.4□□□□□ -0.74
MDC1-205ENST00000425072 FAM169AQ9Y6X4 670 aa10.4□□□□□ -0.74
MDC1-205ENST00000425072 TICRRQ7Z2Z1 1910 aa10.4□□□□□ -0.74
MDC1-205ENST00000425072 GOLGA6L10A6NI86 522 aa10.39□□□□□ -0.75
MDC1-205ENST00000425072 C19orf67A6NJJ6 358 aa10.39□□□□□ -0.75
MDC1-205ENST00000425072 TRAFD1O14545 582 aaPredicted RBP10.39□□□□□ -0.75
MDC1-205ENST00000425072 USP1O94782 785 aa10.39□□□□□ -0.75
MDC1-205ENST00000425072 ACSL3O95573 720 aa10.39□□□□□ -0.75
MDC1-205ENST00000425072 EPHX1P07099 455 aa10.39□□□□□ -0.75
MDC1-205ENST00000425072 IVLP07476 585 aa10.39□□□□□ -0.75
MDC1-205ENST00000425072 PDHA1P08559 390 aa10.39□□□□□ -0.75
MDC1-205ENST00000425072 ATXN1LP0C7T5 689 aaKnown RBP10.39□□□□□ -0.75
MDC1-205ENST00000425072 LPOP22079 712 aaPredicted RBP10.39□□□□□ -0.75
MDC1-205ENST00000425072 XPAP23025 273 aaPredicted RBP10.39□□□□□ -0.75
MDC1-205ENST00000425072 STX2P32856 288 aa10.39□□□□□ -0.75
MDC1-205ENST00000425072 SOX9P48436 509 aa10.39□□□□□ -0.75
MDC1-205ENST00000425072 PTPN5P54829 565 aa10.39□□□□□ -0.75
MDC1-205ENST00000425072 TRAF2Q12933 501 aa10.39□□□□□ -0.75
MDC1-205ENST00000425072 ENPP2Q13822 863 aa10.39□□□□□ -0.75
MDC1-205ENST00000425072 ELAVL3Q14576 367 aaKnown RBP10.39□□□□□ -0.75
MDC1-205ENST00000425072 IHHQ14623 411 aa10.39□□□□□ -0.75
MDC1-205ENST00000425072 STARD3Q14849 445 aa10.39□□□□□ -0.75
MDC1-205ENST00000425072 PON2Q15165 354 aa10.39□□□□□ -0.75
MDC1-205ENST00000425072 TAF1AQ15573 450 aaPredicted RBP10.39□□□□□ -0.75
MDC1-205ENST00000425072 KLHL38Q2WGJ6 581 aa10.39□□□□□ -0.75
MDC1-205ENST00000425072 ANKRD20A4Q4UJ75 823 aa10.39□□□□□ -0.75
MDC1-205ENST00000425072 ZNF805Q5CZA5 627 aa10.39□□□□□ -0.75
MDC1-205ENST00000425072 TJAP1Q5JTD0 557 aa10.39□□□□□ -0.75
MDC1-205ENST00000425072 LGSNQ5TDP6 509 aa10.39□□□□□ -0.75
MDC1-205ENST00000425072 EMC10Q5UCC4 262 aa10.39□□□□□ -0.75
MDC1-205ENST00000425072 TTC7BQ86TV6 843 aa10.39□□□□□ -0.75
MDC1-205ENST00000425072 GOLGA6L1Q8N7Z2 621 aa10.39□□□□□ -0.75
MDC1-205ENST00000425072 GSDMBQ8TAX9 411 aa10.39□□□□□ -0.75
MDC1-205ENST00000425072 STYXQ8WUJ0 223 aa10.39□□□□□ -0.75
MDC1-205ENST00000425072 PIH1D2Q8WWB5 315 aa10.39□□□□□ -0.75
MDC1-205ENST00000425072 CDKL2Q92772 493 aa10.39□□□□□ -0.75
MDC1-205ENST00000425072 SCRN2Q96FV2 425 aa10.39□□□□□ -0.75
MDC1-205ENST00000425072 CFAP36Q96G28 342 aa10.39□□□□□ -0.75
MDC1-205ENST00000425072 PPP1R16AQ96I34 528 aa10.39□□□□□ -0.75
MDC1-205ENST00000425072 KLHL32Q96NJ5 620 aa10.39□□□□□ -0.75
MDC1-205ENST00000425072 CYTH2Q99418 400 aa10.39□□□□□ -0.75
MDC1-205ENST00000425072 DYRK4Q9NR20 520 aa10.39□□□□□ -0.75
MDC1-205ENST00000425072 CHRAC1Q9NRG0 131 aa10.39□□□□□ -0.75
MDC1-205ENST00000425072 SYBUQ9NX95 663 aa10.39□□□□□ -0.75
MDC1-205ENST00000425072 FETUBQ9UGM5 382 aa10.39□□□□□ -0.75
MDC1-205ENST00000425072 PPM1HQ9ULR3 514 aa10.39□□□□□ -0.75
MDC1-205ENST00000425072 TCAF1Q9Y4C2 921 aa10.39□□□□□ -0.75
MDC1-205ENST00000425072 DYNC1LI1Q9Y6G9 523 aaKnown RBP10.39□□□□□ -0.75
MDC1-205ENST00000425072 F5P12259 2224 aa10.39□□□□□ -0.75
MDC1-205ENST00000425072 C5orf42Q9H799 3197 aa10.38□□□□□ -0.75
MDC1-205ENST00000425072 A0A0J9YYE9 177 aa10.38□□□□□ -0.75
MDC1-205ENST00000425072 C1QTNF3-AMACRE9PGA6 284 aa10.38□□□□□ -0.75
MDC1-205ENST00000425072 ATG13O75143 517 aa10.38□□□□□ -0.75
MDC1-205ENST00000425072 LEFTY1O75610 366 aa10.38□□□□□ -0.75
MDC1-205ENST00000425072 TCEA3O75764 348 aa10.38□□□□□ -0.75
MDC1-205ENST00000425072 ALDH1A2O94788 518 aa10.38□□□□□ -0.75
MDC1-205ENST00000425072 TRBC1P01850 177 aa10.38□□□□□ -0.75
MDC1-205ENST00000425072 UGT2B4P06133 528 aa10.38□□□□□ -0.75
MDC1-205ENST00000425072 CYP2A6P11509 494 aaPredicted RBP10.38□□□□□ -0.75
MDC1-205ENST00000425072 SSTR1P30872 391 aa10.38□□□□□ -0.75
MDC1-205ENST00000425072 SLC8A1P32418 973 aa10.38□□□□□ -0.75
MDC1-205ENST00000425072 TIE1P35590 1138 aa10.38□□□□□ -0.75
MDC1-205ENST00000425072 HADHAP40939 763 aa10.38□□□□□ -0.75
MDC1-205ENST00000425072 IL12RB1P42701 662 aa10.38□□□□□ -0.75
MDC1-205ENST00000425072 KIR2DL1P43626 348 aaPredicted RBP10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms