RNA–Protein interactions for RNA: ENST00000424143.5

C9orf3-204, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2

Gene C9orf3, Length 1,605 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-204ENST00000424143 NDRG1Q92597 394 aaKnown RBP15.32■□□□□ 0.04
C9orf3-204ENST00000424143 SGF29Q96ES7 293 aa15.32■□□□□ 0.04
C9orf3-204ENST00000424143 TUBA1CQ9BQE3 449 aa15.32■□□□□ 0.04
C9orf3-204ENST00000424143 ULBP1Q9BZM6 244 aa15.32■□□□□ 0.04
C9orf3-204ENST00000424143 R3HDMLQ9H3Y0 253 aa15.32■□□□□ 0.04
C9orf3-204ENST00000424143 TXNRD2Q9NNW7 524 aa15.32■□□□□ 0.04
C9orf3-204ENST00000424143 ANLNQ9NQW6 1124 aa15.32■□□□□ 0.04
C9orf3-204ENST00000424143 GTSE1Q9NYZ3 720 aa15.32■□□□□ 0.04
C9orf3-204ENST00000424143 TRAF6Q9Y4K3 522 aa15.32■□□□□ 0.04
C9orf3-204ENST00000424143 EP400Q96L91 3159 aa15.32■□□□□ 0.04
C9orf3-204ENST00000424143 KANSL1LA0AUZ9 987 aa15.32■□□□□ 0.04
C9orf3-204ENST00000424143 A8MT66 165 aa15.32■□□□□ 0.04
C9orf3-204ENST00000424143 TNPO2O14787 897 aaKnown RBP15.32■□□□□ 0.04
C9orf3-204ENST00000424143 MATN3O15232 486 aa15.32■□□□□ 0.04
C9orf3-204ENST00000424143 MATN4O95460 622 aa15.32■□□□□ 0.04
C9orf3-204ENST00000424143 GPIP06744 558 aa15.32■□□□□ 0.04
C9orf3-204ENST00000424143 CPB1P15086 417 aa15.32■□□□□ 0.04
C9orf3-204ENST00000424143 IL10P22301 178 aa15.32■□□□□ 0.04
C9orf3-204ENST00000424143 NDUFV1P49821 464 aa15.32■□□□□ 0.04
C9orf3-204ENST00000424143 GRSF1Q12849 480 aaKnown RBP eCLIP15.32■□□□□ 0.04
C9orf3-204ENST00000424143 CYTH1Q15438 398 aa15.32■□□□□ 0.04
C9orf3-204ENST00000424143 NRF1Q16656 503 aa15.32■□□□□ 0.04
C9orf3-204ENST00000424143 Q3C1V9 767 aa15.32■□□□□ 0.04
C9orf3-204ENST00000424143 MTX3Q5HYI7 312 aa15.32■□□□□ 0.04
C9orf3-204ENST00000424143 NEPROQ6NW34 567 aa15.32■□□□□ 0.04
C9orf3-204ENST00000424143 RANBP10Q6VN20 620 aa15.32■□□□□ 0.04
C9orf3-204ENST00000424143 HFE2Q6ZVN8 426 aa15.32■□□□□ 0.04
C9orf3-204ENST00000424143 PAPD5Q8NDF8 572 aaKnown RBP15.32■□□□□ 0.04
C9orf3-204ENST00000424143 PNPT1Q8TCS8 783 aaKnown RBP15.32■□□□□ 0.04
C9orf3-204ENST00000424143 ELMO2Q96JJ3 720 aa15.32■□□□□ 0.04
C9orf3-204ENST00000424143 OMDQ99983 421 aa15.32■□□□□ 0.04
C9orf3-204ENST00000424143 PCDHAC1Q9H158 963 aa15.32■□□□□ 0.04
C9orf3-204ENST00000424143 WDCPQ9H6R7 721 aa15.32■□□□□ 0.04
C9orf3-204ENST00000424143 CAAP1Q9H8G2 361 aa15.32■□□□□ 0.04
C9orf3-204ENST00000424143 PALMDQ9NP74 551 aa15.32■□□□□ 0.04
C9orf3-204ENST00000424143 TBC1D13Q9NVG8 400 aa15.32■□□□□ 0.04
C9orf3-204ENST00000424143 ACTR3BQ9P1U1 418 aa15.32■□□□□ 0.04
C9orf3-204ENST00000424143 OR12D3Q9UGF7 316 aa15.32■□□□□ 0.04
C9orf3-204ENST00000424143 SNX13Q9Y5W8 968 aa15.32■□□□□ 0.04
C9orf3-204ENST00000424143 FGF10O15520 208 aaPredicted RBP15.31■□□□□ 0.04
C9orf3-204ENST00000424143 ZSCAN9O15535 394 aaPredicted RBP15.31■□□□□ 0.04
C9orf3-204ENST00000424143 CBFA2T3O75081 653 aa15.31■□□□□ 0.04
C9orf3-204ENST00000424143 BEST1O76090 585 aa15.31■□□□□ 0.04
C9orf3-204ENST00000424143 LRIG2O94898 1065 aa15.31■□□□□ 0.04
C9orf3-204ENST00000424143 UMPSP11172 480 aa15.31■□□□□ 0.04
C9orf3-204ENST00000424143 GPX3P22352 226 aa15.31■□□□□ 0.04
C9orf3-204ENST00000424143 SLC1A2P43004 574 aa15.31■□□□□ 0.04
C9orf3-204ENST00000424143 MAGEA8P43361 318 aa15.31■□□□□ 0.04
C9orf3-204ENST00000424143 LHX1P48742 406 aa15.31■□□□□ 0.04
C9orf3-204ENST00000424143 NDST2P52849 883 aa15.31■□□□□ 0.04
C9orf3-204ENST00000424143 STX1BP61266 288 aa15.31■□□□□ 0.04
C9orf3-204ENST00000424143 SLC36A3Q495N2 470 aa15.31■□□□□ 0.04
C9orf3-204ENST00000424143 ZNF618Q5T7W0 954 aa15.31■□□□□ 0.04
C9orf3-204ENST00000424143 TIGD7Q6NT04 549 aaPredicted RBP15.31■□□□□ 0.04
C9orf3-204ENST00000424143 ESRP1Q6NXG1 681 aaKnown RBP15.31■□□□□ 0.04
C9orf3-204ENST00000424143 KLHL35Q6PF15 583 aa15.31■□□□□ 0.04
C9orf3-204ENST00000424143 FASTKD5Q7L8L6 764 aaKnown RBP15.31■□□□□ 0.04
C9orf3-204ENST00000424143 DENND6AQ8IWF6 608 aa15.31■□□□□ 0.04
C9orf3-204ENST00000424143 LEMD2Q8NC56 503 aa15.31■□□□□ 0.04
C9orf3-204ENST00000424143 NETO2Q8NC67 525 aa15.31■□□□□ 0.04
C9orf3-204ENST00000424143 CENPNQ96H22 339 aaPredicted RBP15.31■□□□□ 0.04
C9orf3-204ENST00000424143 VPS50Q96JG6 964 aa15.31■□□□□ 0.04
C9orf3-204ENST00000424143 MARK4Q96L34 752 aa15.31■□□□□ 0.04
C9orf3-204ENST00000424143 PPP1R36Q96LQ0 422 aa15.31■□□□□ 0.04
C9orf3-204ENST00000424143 PGLYRP2Q96PD5 576 aa15.31■□□□□ 0.04
C9orf3-204ENST00000424143 PPP1R16BQ96T49 567 aa15.31■□□□□ 0.04
C9orf3-204ENST00000424143 APOL2Q9BQE5 337 aa15.31■□□□□ 0.04
C9orf3-204ENST00000424143 KATNBL1Q9H079 304 aa15.31■□□□□ 0.04
C9orf3-204ENST00000424143 GSTO2Q9H4Y5 243 aa15.31■□□□□ 0.04
C9orf3-204ENST00000424143 NOL11Q9H8H0 719 aaKnown RBP15.31■□□□□ 0.04
C9orf3-204ENST00000424143 CDHR5Q9HBB8 845 aa15.31■□□□□ 0.04
C9orf3-204ENST00000424143 AGPAT4Q9NRZ5 378 aa15.31■□□□□ 0.04
C9orf3-204ENST00000424143 DDIT4Q9NX09 232 aa15.31■□□□□ 0.04
C9orf3-204ENST00000424143 DICER1Q9UPY3 1922 aaKnown RBP15.3■□□□□ 0.04
C9orf3-204ENST00000424143 TYW5A2RUC4 315 aaKnown RBP15.3■□□□□ 0.04
C9orf3-204ENST00000424143 YJEFN3A6XGL0 299 aa15.3■□□□□ 0.04
C9orf3-204ENST00000424143 TMEM233B4DJY2 109 aa15.3■□□□□ 0.04
C9orf3-204ENST00000424143 DLGAP1O14490 977 aa15.3■□□□□ 0.04
C9orf3-204ENST00000424143 VPS4BO75351 444 aa15.3■□□□□ 0.04
C9orf3-204ENST00000424143 DCKP27707 260 aa15.3■□□□□ 0.04
C9orf3-204ENST00000424143 AVPR1AP37288 418 aa15.3■□□□□ 0.04
C9orf3-204ENST00000424143 NRG1Q02297 640 aaPredicted RBP15.3■□□□□ 0.04
C9orf3-204ENST00000424143 EIF4EBP2Q13542 120 aaPredicted RBP15.3■□□□□ 0.04
C9orf3-204ENST00000424143 ATP6AP1Q15904 470 aa15.3■□□□□ 0.04
C9orf3-204ENST00000424143 MAP7D1Q3KQU3 841 aa15.3■□□□□ 0.04
C9orf3-204ENST00000424143 BHLHA9Q7RTU4 235 aa15.3■□□□□ 0.04
C9orf3-204ENST00000424143 CLYBLQ8N0X4 340 aa15.3■□□□□ 0.04
C9orf3-204ENST00000424143 FAM156AQ8NDB6 213 aa15.3■□□□□ 0.04
C9orf3-204ENST00000424143 MOCOSQ96EN8 888 aa15.3■□□□□ 0.04
C9orf3-204ENST00000424143 NXF3Q9H4D5 531 aaKnown RBP15.3■□□□□ 0.04
C9orf3-204ENST00000424143 ATP13A1Q9HD20 1204 aa15.3■□□□□ 0.04
C9orf3-204ENST00000424143 GID8Q9NWU2 228 aa15.3■□□□□ 0.04
C9orf3-204ENST00000424143 MYOCOSA0A1B0GUC4 107 aa15.29■□□□□ 0.04
C9orf3-204ENST00000424143 TTC24A2A3L6 582 aaPredicted RBP15.29■□□□□ 0.04
C9orf3-204ENST00000424143 MBLAC1A4D2B0 266 aaPredicted RBP15.29■□□□□ 0.04
C9orf3-204ENST00000424143 HHLA1C9JL84 531 aa15.29■□□□□ 0.04
C9orf3-204ENST00000424143 SNAP91O60641 907 aa15.29■□□□□ 0.04
C9orf3-204ENST00000424143 RASAL1O95294 804 aa15.29■□□□□ 0.04
C9orf3-204ENST00000424143 IGLV3-25P01717 112 aa15.29■□□□□ 0.04
C9orf3-204ENST00000424143 TCN1P20061 433 aaPredicted RBP15.29■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms