RNA–Protein interactions for RNA: ENST00000421999.7

CMSS1-201, Transcript of cms1 ribosomal small subunit homolog (yeast), humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CMSS1, Length 4,330 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMSS1-201ENST00000421999 CTBP1Q13363 440 aa9.8□□□□□ -0.84
CMSS1-201ENST00000421999 LY6G5CQ5SRR4 150 aa9.8□□□□□ -0.84
CMSS1-201ENST00000421999 SPATA22Q8NHS9 363 aa9.8□□□□□ -0.84
CMSS1-201ENST00000421999 PRCCQ92733 491 aaPredicted RBP9.8□□□□□ -0.84
CMSS1-201ENST00000421999 AP2M1Q96CW1 435 aa9.8□□□□□ -0.84
CMSS1-201ENST00000421999 NEUROG2Q9H2A3 272 aa9.8□□□□□ -0.84
CMSS1-201ENST00000421999 IL1RL2Q9HB29 575 aa9.8□□□□□ -0.84
CMSS1-201ENST00000421999 ASF1AQ9Y294 204 aa9.8□□□□□ -0.84
CMSS1-201ENST00000421999 STARD13Q9Y3M8 1113 aa9.8□□□□□ -0.84
CMSS1-201ENST00000421999 GREB1LQ9C091 1923 aaPredicted RBP9.8□□□□□ -0.84
CMSS1-201ENST00000421999 BCLAF3A2AJT9 711 aaKnown RBP9.8□□□□□ -0.84
CMSS1-201ENST00000421999 H3BMM5 538 aa9.8□□□□□ -0.84
CMSS1-201ENST00000421999 H3BQF6 201 aa9.8□□□□□ -0.84
CMSS1-201ENST00000421999 CASQ2O14958 399 aaPredicted RBP9.8□□□□□ -0.84
CMSS1-201ENST00000421999 SHBGP04278 402 aa9.8□□□□□ -0.84
CMSS1-201ENST00000421999 ENO1P06733 434 aaKnown RBP9.8□□□□□ -0.84
CMSS1-201ENST00000421999 ARHGDIAP52565 204 aa9.8□□□□□ -0.84
CMSS1-201ENST00000421999 NR6A1Q15406 480 aa9.8□□□□□ -0.84
CMSS1-201ENST00000421999 GRAMD1BQ3KR37 738 aa9.8□□□□□ -0.84
CMSS1-201ENST00000421999 CCSAPQ6IQ19 270 aaPredicted RBP9.8□□□□□ -0.84
CMSS1-201ENST00000421999 LRRC8EQ6NSJ5 796 aa9.8□□□□□ -0.84
CMSS1-201ENST00000421999 RHBDF2Q6PJF5 856 aa9.8□□□□□ -0.84
CMSS1-201ENST00000421999 PRR23BQ6ZRT6 265 aa9.8□□□□□ -0.84
CMSS1-201ENST00000421999 TMEM173Q86WV6 379 aaPredicted RBP9.8□□□□□ -0.84
CMSS1-201ENST00000421999 ZNF567Q8N184 647 aa9.8□□□□□ -0.84
CMSS1-201ENST00000421999 ZNF614Q8N883 585 aa9.8□□□□□ -0.84
CMSS1-201ENST00000421999 CD101Q93033 1021 aa9.8□□□□□ -0.84
CMSS1-201ENST00000421999 CERS2Q96G23 380 aa9.8□□□□□ -0.84
CMSS1-201ENST00000421999 SPACA7Q96KW9 195 aa9.8□□□□□ -0.84
CMSS1-201ENST00000421999 KLHL32Q96NJ5 620 aa9.8□□□□□ -0.84
CMSS1-201ENST00000421999 NDNQ99608 321 aa9.8□□□□□ -0.84
CMSS1-201ENST00000421999 TMBIM4Q9HC24 238 aa9.8□□□□□ -0.84
CMSS1-201ENST00000421999 IMP3Q9NV31 184 aaKnown RBP9.8□□□□□ -0.84
CMSS1-201ENST00000421999 DZANK1Q9NVP4 752 aa9.8□□□□□ -0.84
CMSS1-201ENST00000421999 MTPAPQ9NVV4 582 aaKnown RBP eCLIP9.8□□□□□ -0.84
CMSS1-201ENST00000421999 FBXO5Q9UKT4 447 aa9.8□□□□□ -0.84
CMSS1-201ENST00000421999 HS3ST4Q9Y661 456 aa9.8□□□□□ -0.84
CMSS1-201ENST00000421999 ADH5P11766 374 aa9.79□□□□□ -0.84
CMSS1-201ENST00000421999 MC4RP32245 332 aa9.79□□□□□ -0.84
CMSS1-201ENST00000421999 CSKP41240 450 aa9.79□□□□□ -0.84
CMSS1-201ENST00000421999 ALDH9A1P49189 494 aa9.79□□□□□ -0.84
CMSS1-201ENST00000421999 IFI35P80217 286 aaPredicted RBP9.79□□□□□ -0.84
CMSS1-201ENST00000421999 HPCAP84074 193 aa9.79□□□□□ -0.84
CMSS1-201ENST00000421999 GRTP1Q5TC63 336 aa9.79□□□□□ -0.84
CMSS1-201ENST00000421999 MBLAC2Q68D91 279 aa9.79□□□□□ -0.84
CMSS1-201ENST00000421999 ANKS6Q68DC2 871 aa9.79□□□□□ -0.84
CMSS1-201ENST00000421999 FAM171BQ6P995 826 aa9.79□□□□□ -0.84
CMSS1-201ENST00000421999 SLC39A11Q8N1S5 342 aa9.79□□□□□ -0.84
CMSS1-201ENST00000421999 EIF1ADQ8N9N8 165 aaKnown RBP9.79□□□□□ -0.84
CMSS1-201ENST00000421999 CPT1BQ92523 772 aa9.79□□□□□ -0.84
CMSS1-201ENST00000421999 SIPA1Q96FS4 1042 aa9.79□□□□□ -0.84
CMSS1-201ENST00000421999 QKIQ96PU8 341 aaKnown RBP eCLIP9.79□□□□□ -0.841e-6■■■■■ 36.4
CMSS1-201ENST00000421999 EVA1BQ9NVM1 165 aa9.79□□□□□ -0.84
CMSS1-201ENST00000421999 ZNF446Q9NWS9 450 aa9.79□□□□□ -0.84
CMSS1-201ENST00000421999 MFHAS1Q9Y4C4 1052 aa9.79□□□□□ -0.84
CMSS1-201ENST00000421999 KNTC1P50748 2209 aa9.79□□□□□ -0.84
CMSS1-201ENST00000421999 NDST3O95803 873 aa9.79□□□□□ -0.84
CMSS1-201ENST00000421999 MT-CYBP00156 380 aaPredicted RBP9.79□□□□□ -0.84
CMSS1-201ENST00000421999 KRT6AP02538 564 aa9.79□□□□□ -0.84
CMSS1-201ENST00000421999 KRT6BP04259 564 aa9.79□□□□□ -0.84
CMSS1-201ENST00000421999 DGKAP23743 735 aa9.79□□□□□ -0.84
CMSS1-201ENST00000421999 PTGIRP43119 386 aa9.79□□□□□ -0.84
CMSS1-201ENST00000421999 KRT6CP48668 564 aa9.79□□□□□ -0.84
CMSS1-201ENST00000421999 CDK7P50613 346 aa9.79□□□□□ -0.84
CMSS1-201ENST00000421999 TGM3Q08188 693 aa9.79□□□□□ -0.84
CMSS1-201ENST00000421999 DSC1Q08554 894 aa9.79□□□□□ -0.84
CMSS1-201ENST00000421999 XKR4Q5GH76 650 aa9.79□□□□□ -0.84
CMSS1-201ENST00000421999 CERCAMQ5T4B2 595 aa9.79□□□□□ -0.84
CMSS1-201ENST00000421999 N4BP2L1Q5TBK1 243 aaPredicted RBP9.79□□□□□ -0.84
CMSS1-201ENST00000421999 C1orf146Q5VVC0 180 aa9.79□□□□□ -0.84
CMSS1-201ENST00000421999 ANKRD22Q5VYY1 191 aa9.79□□□□□ -0.84
CMSS1-201ENST00000421999 DPY19L2P1Q6NXN4 242 aa9.79□□□□□ -0.84
CMSS1-201ENST00000421999 AFTPHQ6ULP2 937 aa9.79□□□□□ -0.84
CMSS1-201ENST00000421999 UBR7Q8N806 425 aa9.79□□□□□ -0.84
CMSS1-201ENST00000421999 ZMIZ2Q8NF64 920 aa9.79□□□□□ -0.84
CMSS1-201ENST00000421999 OR10G6Q8NH81 332 aa9.79□□□□□ -0.84
CMSS1-201ENST00000421999 SLC35B2Q8TB61 432 aa9.79□□□□□ -0.84
CMSS1-201ENST00000421999 MAGEC3Q8TD91 643 aa9.79□□□□□ -0.84
CMSS1-201ENST00000421999 SHDQ96IW2 340 aa9.79□□□□□ -0.84
CMSS1-201ENST00000421999 CPNE1Q99829 537 aa9.79□□□□□ -0.84
CMSS1-201ENST00000421999 ACAT2Q9BWD1 397 aa9.79□□□□□ -0.84
CMSS1-201ENST00000421999 BACE2Q9Y5Z0 518 aa9.79□□□□□ -0.84
CMSS1-201ENST00000421999 CITO14578 2027 aa9.79□□□□□ -0.84
CMSS1-201ENST00000421999 H0Y3Z8 333 aa9.79□□□□□ -0.84
CMSS1-201ENST00000421999 AIM2O14862 343 aa9.79□□□□□ -0.84
CMSS1-201ENST00000421999 ADAM12O43184 909 aa9.79□□□□□ -0.84
CMSS1-201ENST00000421999 DYRK3O43781 588 aa9.79□□□□□ -0.84
CMSS1-201ENST00000421999 FGFR3P22607 806 aa9.79□□□□□ -0.84
CMSS1-201ENST00000421999 SEC24CP53992 1094 aa9.79□□□□□ -0.84
CMSS1-201ENST00000421999 FAM189BP81408 668 aa9.79□□□□□ -0.84
CMSS1-201ENST00000421999 ZNF252P-AS1Q0IIN9 211 aa9.79□□□□□ -0.84
CMSS1-201ENST00000421999 ABRQ12979 859 aa9.79□□□□□ -0.84
CMSS1-201ENST00000421999 TERF2Q15554 542 aa9.79□□□□□ -0.84
CMSS1-201ENST00000421999 TRIM71Q2Q1W2 868 aaKnown RBP9.79□□□□□ -0.84
CMSS1-201ENST00000421999 NCBP2-AS2Q69YL0 99 aa9.79□□□□□ -0.84
CMSS1-201ENST00000421999 TRIM68Q6AZZ1 485 aa9.79□□□□□ -0.84
CMSS1-201ENST00000421999 POTEHQ6S545 545 aa9.79□□□□□ -0.84
CMSS1-201ENST00000421999 CYB5D2Q8WUJ1 264 aa9.79□□□□□ -0.84
CMSS1-201ENST00000421999 KXD1Q9BQD3 176 aa9.79□□□□□ -0.84
CMSS1-201ENST00000421999 TRIM15Q9C019 465 aa9.79□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 137.5 ms