RNA–Protein interactions for RNA: ENST00000418628.5

PTCD3-204, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 4

Gene PTCD3, Length 532 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-204ENST00000418628 ZSCAN12O43309 604 aa18.78■□□□□ 0.6
PTCD3-204ENST00000418628 PRLP01236 227 aa18.78■□□□□ 0.6
PTCD3-204ENST00000418628 GNSP15586 552 aa18.78■□□□□ 0.6
PTCD3-204ENST00000418628 ITIH2P19823 946 aa18.78■□□□□ 0.6
PTCD3-204ENST00000418628 CD68P34810 354 aaPredicted RBP18.78■□□□□ 0.6
PTCD3-204ENST00000418628 RPS21P63220 83 aaKnown RBP18.78■□□□□ 0.6
PTCD3-204ENST00000418628 SKOR1P84550 965 aa18.78■□□□□ 0.6
PTCD3-204ENST00000418628 RPS6KA1Q15418 735 aa18.78■□□□□ 0.6
PTCD3-204ENST00000418628 FAM182AQ5T1J6 154 aa18.78■□□□□ 0.6
PTCD3-204ENST00000418628 DPPA4Q7L190 304 aa18.78■□□□□ 0.6
PTCD3-204ENST00000418628 TTC7BQ86TV6 843 aa18.78■□□□□ 0.6
PTCD3-204ENST00000418628 PRPF39Q86UA1 669 aaKnown RBP18.78■□□□□ 0.6
PTCD3-204ENST00000418628 KIAA2013Q8IYS2 634 aa18.78■□□□□ 0.6
PTCD3-204ENST00000418628 PIH1D2Q8WWB5 315 aa18.78■□□□□ 0.6
PTCD3-204ENST00000418628 HTR3CQ8WXA8 447 aa18.78■□□□□ 0.6
PTCD3-204ENST00000418628 SLC6A18Q96N87 628 aa18.78■□□□□ 0.6
PTCD3-204ENST00000418628 VAT1Q99536 393 aa18.78■□□□□ 0.6
PTCD3-204ENST00000418628 PYCARDQ9ULZ3 195 aa18.78■□□□□ 0.6
PTCD3-204ENST00000418628 RAI2Q9Y5P3 530 aa18.78■□□□□ 0.6
PTCD3-204ENST00000418628 COL5A1P20908 1838 aaPredicted RBP18.77■□□□□ 0.6
PTCD3-204ENST00000418628 USP27XA6NNY8 438 aa18.77■□□□□ 0.6
PTCD3-204ENST00000418628 PCDH8O95206 1070 aa18.77■□□□□ 0.6
PTCD3-204ENST00000418628 WNT1P04628 370 aa18.77■□□□□ 0.6
PTCD3-204ENST00000418628 MAT2AP31153 395 aaKnown RBP18.77■□□□□ 0.6
PTCD3-204ENST00000418628 AFF3P51826 1226 aaKnown RBP18.77■□□□□ 0.6
PTCD3-204ENST00000418628 LIMK1P53667 647 aa18.77■□□□□ 0.6
PTCD3-204ENST00000418628 LMNB2Q03252 620 aa18.77■□□□□ 0.6
PTCD3-204ENST00000418628 AGERQ15109 404 aa18.77■□□□□ 0.6
PTCD3-204ENST00000418628 SEL1L2Q5TEA6 688 aa18.77■□□□□ 0.6
PTCD3-204ENST00000418628 TTC13Q8NBP0 860 aa18.77■□□□□ 0.6
PTCD3-204ENST00000418628 SLC35B2Q8TB61 432 aa18.77■□□□□ 0.6
PTCD3-204ENST00000418628 FEM1CQ96JP0 617 aa18.77■□□□□ 0.6
PTCD3-204ENST00000418628 KLF6Q99612 283 aaPredicted RBP18.77■□□□□ 0.6
PTCD3-204ENST00000418628 MIR1-1HGQ9H1L0 117 aa18.77■□□□□ 0.6
PTCD3-204ENST00000418628 SLC25A51Q9H1U9 297 aa18.77■□□□□ 0.6
PTCD3-204ENST00000418628 GPR27Q9NS67 375 aa18.77■□□□□ 0.6
PTCD3-204ENST00000418628 R3HDM2Q9Y2K5 976 aaKnown RBP18.77■□□□□ 0.6
PTCD3-204ENST00000418628 CFAP69A5D8W1 941 aa18.76■□□□□ 0.59
PTCD3-204ENST00000418628 CPP00450 1065 aa18.76■□□□□ 0.59
PTCD3-204ENST00000418628 PDHA1P08559 390 aa18.76■□□□□ 0.59
PTCD3-204ENST00000418628 RBP3P10745 1247 aa18.76■□□□□ 0.59
PTCD3-204ENST00000418628 GM2AP17900 193 aa18.76■□□□□ 0.59
PTCD3-204ENST00000418628 RBL1P28749 1068 aa18.76■□□□□ 0.59
PTCD3-204ENST00000418628 EIF3EP60228 445 aaKnown RBP18.76■□□□□ 0.59
PTCD3-204ENST00000418628 POLR2LP62875 67 aaKnown RBP18.76■□□□□ 0.59
PTCD3-204ENST00000418628 GRIK2Q13002 908 aa18.76■□□□□ 0.59
PTCD3-204ENST00000418628 SIX1Q15475 284 aaPredicted RBP18.76■□□□□ 0.59
PTCD3-204ENST00000418628 CFAP58Q5T655 872 aa18.76■□□□□ 0.59
PTCD3-204ENST00000418628 ARMC12Q5T9G4 340 aa18.76■□□□□ 0.59
PTCD3-204ENST00000418628 IQCHQ86VS3 1027 aa18.76■□□□□ 0.59
PTCD3-204ENST00000418628 SLC13A5Q86YT5 568 aaPredicted RBP18.76■□□□□ 0.59
PTCD3-204ENST00000418628 CDKL3Q8IVW4 592 aaPredicted RBP18.76■□□□□ 0.59
PTCD3-204ENST00000418628 ZNF567Q8N184 647 aa18.76■□□□□ 0.59
PTCD3-204ENST00000418628 DENND6BQ8NEG7 585 aa18.76■□□□□ 0.59
PTCD3-204ENST00000418628 SERAC1Q96JX3 654 aa18.76■□□□□ 0.59
PTCD3-204ENST00000418628 AGAP3Q96P47 875 aa18.76■□□□□ 0.59
PTCD3-204ENST00000418628 LENG8Q96PV6 779 aaPredicted RBP18.76■□□□□ 0.59
PTCD3-204ENST00000418628 TRIB3Q96RU7 358 aa18.76■□□□□ 0.59
PTCD3-204ENST00000418628 NUSAP1Q9BXS6 441 aaKnown RBP18.76■□□□□ 0.59
PTCD3-204ENST00000418628 SLC17A9Q9BYT1 436 aa18.76■□□□□ 0.59
PTCD3-204ENST00000418628 USP29Q9HBJ7 922 aa18.76■□□□□ 0.59
PTCD3-204ENST00000418628 GLOD4Q9HC38 313 aa18.76■□□□□ 0.59
PTCD3-204ENST00000418628 SEPT10Q9P0V9 454 aa18.76■□□□□ 0.59
PTCD3-204ENST00000418628 PHTF1Q9UMS5 762 aa18.76■□□□□ 0.59
PTCD3-204ENST00000418628 PCDHB9Q9Y5E1 797 aa18.76■□□□□ 0.59
PTCD3-204ENST00000418628 CACNA1AO00555 2505 aa18.76■□□□□ 0.59
PTCD3-204ENST00000418628 GOLGA4Q13439 2230 aaKnown RBP18.76■□□□□ 0.59
PTCD3-204ENST00000418628 ARHGEF17Q96PE2 2063 aaPredicted RBP18.75■□□□□ 0.59
PTCD3-204ENST00000418628 GOLGA6L9A6NEM1 432 aa18.75■□□□□ 0.59
PTCD3-204ENST00000418628 IGLON5A6NGN9 336 aa18.75■□□□□ 0.59
PTCD3-204ENST00000418628 PRAMEF26H0Y7S4 382 aa18.75■□□□□ 0.59
PTCD3-204ENST00000418628 ARHGAP33O14559 1287 aa18.75■□□□□ 0.59
PTCD3-204ENST00000418628 CDX4O14627 284 aaPredicted RBP18.75■□□□□ 0.59
PTCD3-204ENST00000418628 VILLO15195 856 aa18.75■□□□□ 0.59
PTCD3-204ENST00000418628 GDF9O60383 454 aa18.75■□□□□ 0.59
PTCD3-204ENST00000418628 PRKCGP05129 697 aa18.75■□□□□ 0.59
PTCD3-204ENST00000418628 CFIP05156 583 aa18.75■□□□□ 0.59
PTCD3-204ENST00000418628 PRLRP16471 622 aa18.75■□□□□ 0.59
PTCD3-204ENST00000418628 ENGP17813 658 aa18.75■□□□□ 0.59
PTCD3-204ENST00000418628 HNRNPA2B1P22626 353 aaKnown RBP18.75■□□□□ 0.59
PTCD3-204ENST00000418628 CD86P42081 329 aa18.75■□□□□ 0.59
PTCD3-204ENST00000418628 RPL26P61254 145 aaKnown RBP18.75■□□□□ 0.59
PTCD3-204ENST00000418628 ITKQ08881 620 aa18.75■□□□□ 0.59
PTCD3-204ENST00000418628 ERAP2Q6P179 960 aa18.75■□□□□ 0.59
PTCD3-204ENST00000418628 LAYNQ6UX15 382 aa18.75■□□□□ 0.59
PTCD3-204ENST00000418628 GCNT7Q6ZNI0 430 aa18.75■□□□□ 0.59
PTCD3-204ENST00000418628 ABI3BPQ7Z7G0 1075 aa18.75■□□□□ 0.59
PTCD3-204ENST00000418628 CBARPQ8N350 705 aaPredicted RBP18.75■□□□□ 0.59
PTCD3-204ENST00000418628 C12orf50Q8NA57 414 aaPredicted RBP18.75■□□□□ 0.59
PTCD3-204ENST00000418628 FAM118BQ9BPY3 351 aa18.75■□□□□ 0.59
PTCD3-204ENST00000418628 GORASP1Q9BQQ3 440 aa18.75■□□□□ 0.59
PTCD3-204ENST00000418628 EDEM2Q9BV94 578 aa18.75■□□□□ 0.59
PTCD3-204ENST00000418628 FSCN3Q9NQT6 498 aa18.75■□□□□ 0.59
PTCD3-204ENST00000418628 KCND1Q9NSA2 647 aa18.75■□□□□ 0.59
PTCD3-204ENST00000418628 B4GALT6Q9UBX8 382 aa18.75■□□□□ 0.59
PTCD3-204ENST00000418628 RPL26L1Q9UNX3 145 aaKnown RBP18.75■□□□□ 0.59
PTCD3-204ENST00000418628 JRKLQ9Y4A0 524 aa18.75■□□□□ 0.59
PTCD3-204ENST00000418628 TTLL3Q9Y4R7 772 aa18.75■□□□□ 0.59
PTCD3-204ENST00000418628 A0A0J9YYE9 177 aa18.74■□□□□ 0.59
PTCD3-204ENST00000418628 H7C0C1 242 aa18.74■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms