RNA–Protein interactions for RNA: ENST00000418600.6

SYNGAP1-202, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5 BASIC

Gene SYNGAP1, Length 5,828 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-202ENST00000418600 STARD8Q92502 1023 aa17.03■□□□□ 0.32
SYNGAP1-202ENST00000418600 PPP1R10Q96QC0 940 aaKnown RBP17.03■□□□□ 0.32
SYNGAP1-202ENST00000418600 ECSITQ9BQ95 431 aa17.03■□□□□ 0.32
SYNGAP1-202ENST00000418600 ABCG8Q9H221 673 aa17.03■□□□□ 0.32
SYNGAP1-202ENST00000418600 IL1RL2Q9HB29 575 aa17.03■□□□□ 0.32
SYNGAP1-202ENST00000418600 C4BPAP04003 597 aaKnown RBP17.02■□□□□ 0.32
SYNGAP1-202ENST00000418600 CTSAP10619 480 aa17.02■□□□□ 0.32
SYNGAP1-202ENST00000418600 MRPL28Q13084 256 aaKnown RBP17.02■□□□□ 0.32
SYNGAP1-202ENST00000418600 CHI3L2Q15782 390 aa17.02■□□□□ 0.32
SYNGAP1-202ENST00000418600 FAM46DQ8NEK8 389 aa17.02■□□□□ 0.32
SYNGAP1-202ENST00000418600 ASZ1Q8WWH4 475 aa17.02■□□□□ 0.32
SYNGAP1-202ENST00000418600 DPYSL5Q9BPU6 564 aa17.02■□□□□ 0.32
SYNGAP1-202ENST00000418600 THUMPD3Q9BV44 507 aaKnown RBP17.02■□□□□ 0.32
SYNGAP1-202ENST00000418600 AURKCQ9UQB9 309 aa17.02■□□□□ 0.32
SYNGAP1-202ENST00000418600 COL2A1P02458 1487 aaPredicted RBP17.02■□□□□ 0.32
SYNGAP1-202ENST00000418600 CHURC1-FNTBB4DL54 471 aa17.02■□□□□ 0.32
SYNGAP1-202ENST00000418600 USP12O75317 370 aa17.02■□□□□ 0.32
SYNGAP1-202ENST00000418600 C16orf89Q6UX73 402 aa17.02■□□□□ 0.32
SYNGAP1-202ENST00000418600 MFSD7Q6UXD7 560 aa17.02■□□□□ 0.32
SYNGAP1-202ENST00000418600 TRIM69Q86WT6 500 aa17.02■□□□□ 0.32
SYNGAP1-202ENST00000418600 ARID3BQ8IVW6 561 aaPredicted RBP17.02■□□□□ 0.32
SYNGAP1-202ENST00000418600 RIBC1Q8N443 379 aaPredicted RBP17.02■□□□□ 0.32
SYNGAP1-202ENST00000418600 ERP44Q9BS26 406 aa17.02■□□□□ 0.32
SYNGAP1-202ENST00000418600 WDR3Q9UNX4 943 aaKnown RBP eCLIP17.02■□□□□ 0.32
SYNGAP1-202ENST00000418600 TLR6Q9Y2C9 796 aa17.02■□□□□ 0.32
SYNGAP1-202ENST00000418600 FAM170BA6NMN3 283 aa17.02■□□□□ 0.32
SYNGAP1-202ENST00000418600 GTPBP1O00178 669 aaKnown RBP17.02■□□□□ 0.32
SYNGAP1-202ENST00000418600 SEC22BO75396 215 aa17.02■□□□□ 0.32
SYNGAP1-202ENST00000418600 PLGLB1Q02325 96 aa17.02■□□□□ 0.32
SYNGAP1-202ENST00000418600 STX4Q12846 297 aa17.02■□□□□ 0.32
SYNGAP1-202ENST00000418600 ELOCQ15369 112 aa17.02■□□□□ 0.32
SYNGAP1-202ENST00000418600 SLC9B2Q86UD5 537 aa17.02■□□□□ 0.32
SYNGAP1-202ENST00000418600 LRRC6Q86X45 466 aa17.02■□□□□ 0.32
SYNGAP1-202ENST00000418600 CCSER2Q9H7U1 834 aa17.02■□□□□ 0.32
SYNGAP1-202ENST00000418600 WDR6Q9NNW5 1121 aaKnown RBP17.02■□□□□ 0.32
SYNGAP1-202ENST00000418600 PHTF1Q9UMS5 762 aa17.02■□□□□ 0.32
SYNGAP1-202ENST00000418600 TNPO3Q9Y5L0 923 aaKnown RBP17.02■□□□□ 0.32
SYNGAP1-202ENST00000418600 MINDY4Q4G0A6 757 aa17.02■□□□□ 0.31
SYNGAP1-202ENST00000418600 KCTD13Q8WZ19 329 aa17.02■□□□□ 0.31
SYNGAP1-202ENST00000418600 C16orf70Q9BSU1 422 aa17.02■□□□□ 0.31
SYNGAP1-202ENST00000418600 ZNF780BQ9Y6R6 833 aa17.02■□□□□ 0.31
SYNGAP1-202ENST00000418600 HOXC12P31275 282 aa17.02■□□□□ 0.31
SYNGAP1-202ENST00000418600 PLIN5Q00G26 463 aa17.02■□□□□ 0.31
SYNGAP1-202ENST00000418600 E2F4Q16254 413 aa17.02■□□□□ 0.31
SYNGAP1-202ENST00000418600 XKR6Q5GH73 641 aa17.02■□□□□ 0.31
SYNGAP1-202ENST00000418600 CES3Q6UWW8 571 aa17.02■□□□□ 0.31
SYNGAP1-202ENST00000418600 C17orf64Q86WR6 236 aa17.02■□□□□ 0.31
SYNGAP1-202ENST00000418600 TSC22D3Q99576 134 aa17.02■□□□□ 0.31
SYNGAP1-202ENST00000418600 IL17AQ16552 155 aa17.01■□□□□ 0.31
SYNGAP1-202ENST00000418600 GDPD4Q6W3E5 623 aa17.01■□□□□ 0.31
SYNGAP1-202ENST00000418600 CCDC185Q8N715 623 aa17.01■□□□□ 0.31
SYNGAP1-202ENST00000418600 GLIS3Q8NEA6 775 aa17.01■□□□□ 0.31
SYNGAP1-202ENST00000418600 GFM2Q969S9 779 aaKnown RBP17.01■□□□□ 0.31
SYNGAP1-202ENST00000418600 ILKAPQ9H0C8 392 aaPredicted RBP17.01■□□□□ 0.31
SYNGAP1-202ENST00000418600 GRIA2P42262 883 aa17.01■□□□□ 0.31
SYNGAP1-202ENST00000418600 TCEAL5Q5H9L2 206 aa17.01■□□□□ 0.31
SYNGAP1-202ENST00000418600 SCAMP5Q8TAC9 235 aa17.01■□□□□ 0.31
SYNGAP1-202ENST00000418600 LRRC46Q96FV0 321 aa17.01■□□□□ 0.31
SYNGAP1-202ENST00000418600 CDH7Q9ULB5 785 aa17.01■□□□□ 0.31
SYNGAP1-202ENST00000418600 SOX11P35716 441 aa17.01■□□□□ 0.31
SYNGAP1-202ENST00000418600 NDST2P52849 883 aa17.01■□□□□ 0.31
SYNGAP1-202ENST00000418600 UBXN11Q5T124 520 aa17.01■□□□□ 0.31
SYNGAP1-202ENST00000418600 POLG2Q9UHN1 485 aa17.01■□□□□ 0.31
SYNGAP1-202ENST00000418600 DEAF1O75398 565 aaPredicted RBP17.01■□□□□ 0.31
SYNGAP1-202ENST00000418600 POU5F1Q01860 360 aaKnown RBP17.01■□□□□ 0.31
SYNGAP1-202ENST00000418600 CMTM8Q8IZV2 173 aa17.01■□□□□ 0.31
SYNGAP1-202ENST00000418600 MTMR8Q96EF0 704 aa17.01■□□□□ 0.31
SYNGAP1-202ENST00000418600 HMCESQ96FZ2 354 aa17.01■□□□□ 0.31
SYNGAP1-202ENST00000418600 LRRC1Q9BTT6 524 aa17.01■□□□□ 0.31
SYNGAP1-202ENST00000418600 MARCOQ9UEW3 520 aaPredicted RBP17.01■□□□□ 0.31
SYNGAP1-202ENST00000418600 SNX6Q9UNH7 406 aa17.01■□□□□ 0.31
SYNGAP1-202ENST00000418600 DNAL1Q4LDG9 190 aa17.01■□□□□ 0.31
SYNGAP1-202ENST00000418600 ARSHQ5FYA8 562 aa17.01■□□□□ 0.31
SYNGAP1-202ENST00000418600 ZNF280BQ86YH2 543 aa17.01■□□□□ 0.31
SYNGAP1-202ENST00000418600 OR4L1Q8NH43 312 aa17.01■□□□□ 0.31
SYNGAP1-202ENST00000418600 POLR1BQ9H9Y6 1135 aa17.01■□□□□ 0.31
SYNGAP1-202ENST00000418600 ETNK2Q9NVF9 386 aa17.01■□□□□ 0.31
SYNGAP1-202ENST00000418600 PSMD13Q9UNM6 376 aa17.01■□□□□ 0.31
SYNGAP1-202ENST00000418600 ALS2Q96Q42 1657 aa17■□□□□ 0.31
SYNGAP1-202ENST00000418600 RAD51CO43502 376 aa17■□□□□ 0.31
SYNGAP1-202ENST00000418600 UMPSP11172 480 aa17■□□□□ 0.31
SYNGAP1-202ENST00000418600 RRM2P31350 389 aa17■□□□□ 0.31
SYNGAP1-202ENST00000418600 DYNC1I2Q13409 638 aaKnown RBP17■□□□□ 0.31
SYNGAP1-202ENST00000418600 FAM71AQ8IYT1 594 aa17■□□□□ 0.31
SYNGAP1-202ENST00000418600 OR52K1Q8NGK4 314 aa17■□□□□ 0.31
SYNGAP1-202ENST00000418600 EPS8L1Q8TE68 723 aa17■□□□□ 0.31
SYNGAP1-202ENST00000418600 RGS14O43566 566 aa17■□□□□ 0.31
SYNGAP1-202ENST00000418600 CXCL12P48061 93 aa17■□□□□ 0.31
SYNGAP1-202ENST00000418600 DEFB103AP81534 67 aa17■□□□□ 0.31
SYNGAP1-202ENST00000418600 LDLRAP1Q5SW96 308 aa17■□□□□ 0.31
SYNGAP1-202ENST00000418600 ADGRF1Q5T601 910 aa17■□□□□ 0.31
SYNGAP1-202ENST00000418600 CFAP206Q8IYR0 622 aa17■□□□□ 0.31
SYNGAP1-202ENST00000418600 TMEM209Q96SK2 561 aa17■□□□□ 0.31
SYNGAP1-202ENST00000418600 ZDHHC7Q9NXF8 308 aa17■□□□□ 0.31
SYNGAP1-202ENST00000418600 CES2O00748 559 aa17■□□□□ 0.31
SYNGAP1-202ENST00000418600 CLDN4O14493 209 aa17■□□□□ 0.31
SYNGAP1-202ENST00000418600 TEX28O15482 410 aa17■□□□□ 0.31
SYNGAP1-202ENST00000418600 SLC25A12O75746 678 aa17■□□□□ 0.31
SYNGAP1-202ENST00000418600 ATP13A5Q4VNC0 1218 aa17■□□□□ 0.31
SYNGAP1-202ENST00000418600 KATNAL2Q8IYT4 538 aa17■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms