RNA–Protein interactions for RNA: ENST00000418518.2

LINCMD1-201, Transcript of long intergenic non-protein coding RNA, muscle differentiation 1, humanhuman

TSL 5 BASIC

Gene LINCMD1, Length 462 nt, Biotype lincRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINCMD1-201ENST00000418518 ARRB2P32121 409 aa9.1□□□□□ -0.95
LINCMD1-201ENST00000418518 GMPRP36959 345 aa9.1□□□□□ -0.95
LINCMD1-201ENST00000418518 CSNK1DP48730 415 aa9.1□□□□□ -0.95
LINCMD1-201ENST00000418518 SUOXP51687 545 aa9.1□□□□□ -0.95
LINCMD1-201ENST00000418518 HK2P52789 917 aa9.1□□□□□ -0.95
LINCMD1-201ENST00000418518 TAS2R39P59534 338 aa9.1□□□□□ -0.95
LINCMD1-201ENST00000418518 ABCE1P61221 599 aaKnown RBP9.1□□□□□ -0.95
LINCMD1-201ENST00000418518 IRX4P78413 519 aa9.1□□□□□ -0.95
LINCMD1-201ENST00000418518 RIPK1Q13546 671 aa9.1□□□□□ -0.95
LINCMD1-201ENST00000418518 TAF1AQ15573 450 aaPredicted RBP9.1□□□□□ -0.95
LINCMD1-201ENST00000418518 TBCCQ15814 346 aa9.1□□□□□ -0.95
LINCMD1-201ENST00000418518 TMEM240Q5SV17 173 aa9.1□□□□□ -0.95
LINCMD1-201ENST00000418518 RBM20Q5T481 1227 aaKnown RBP9.1□□□□□ -0.95
LINCMD1-201ENST00000418518 LIPMQ5VYY2 423 aa9.1□□□□□ -0.95
LINCMD1-201ENST00000418518 TXNDC8Q6A555 127 aa9.1□□□□□ -0.95
LINCMD1-201ENST00000418518 LRRC8EQ6NSJ5 796 aa9.1□□□□□ -0.95
LINCMD1-201ENST00000418518 PSRC1Q6PGN9 363 aaPredicted RBP9.1□□□□□ -0.95
LINCMD1-201ENST00000418518 NCEH1Q6PIU2 408 aa9.1□□□□□ -0.95
LINCMD1-201ENST00000418518 CNSTQ6PJW8 725 aa9.1□□□□□ -0.95
LINCMD1-201ENST00000418518 ATG14Q6ZNE5 492 aa9.1□□□□□ -0.95
LINCMD1-201ENST00000418518 ZCCHC23Q6ZST2 131 aa9.1□□□□□ -0.95
LINCMD1-201ENST00000418518 OTOP2Q7RTS6 562 aa9.1□□□□□ -0.95
LINCMD1-201ENST00000418518 KDELC2Q7Z4H8 507 aa9.1□□□□□ -0.95
LINCMD1-201ENST00000418518 MTDHQ86UE4 582 aaKnown RBP9.1□□□□□ -0.95
LINCMD1-201ENST00000418518 ARID3BQ8IVW6 561 aaPredicted RBP9.1□□□□□ -0.95
LINCMD1-201ENST00000418518 CEP97Q8IW35 865 aa9.1□□□□□ -0.95
LINCMD1-201ENST00000418518 ARL14EPQ8N8R7 260 aaPredicted RBP9.1□□□□□ -0.95
LINCMD1-201ENST00000418518 KLHL23Q8NBE8 558 aa9.1□□□□□ -0.95
LINCMD1-201ENST00000418518 KREMEN2Q8NCW0 462 aa9.1□□□□□ -0.95
LINCMD1-201ENST00000418518 PIWIL2Q8TC59 973 aaKnown RBP9.1□□□□□ -0.95
LINCMD1-201ENST00000418518 SREK1Q8WXA9 508 aaKnown RBP9.1□□□□□ -0.95
LINCMD1-201ENST00000418518 HDAC10Q969S8 669 aa9.1□□□□□ -0.95
LINCMD1-201ENST00000418518 DNAJC1Q96KC8 554 aaKnown RBP9.1□□□□□ -0.95
LINCMD1-201ENST00000418518 TSNARE1Q96NA8 513 aa9.1□□□□□ -0.95
LINCMD1-201ENST00000418518 OMDQ99983 421 aa9.1□□□□□ -0.95
LINCMD1-201ENST00000418518 FEM1AQ9BSK4 669 aa9.1□□□□□ -0.95
LINCMD1-201ENST00000418518 SPON2Q9BUD6 331 aa9.1□□□□□ -0.95
LINCMD1-201ENST00000418518 MUC3BQ9H195 1237 aa9.1□□□□□ -0.95
LINCMD1-201ENST00000418518 POPDC3Q9HBV1 291 aa9.1□□□□□ -0.95
LINCMD1-201ENST00000418518 TRPC7Q9HCX4 862 aa9.1□□□□□ -0.95
LINCMD1-201ENST00000418518 SCUBE2Q9NQ36 999 aa9.1□□□□□ -0.95
LINCMD1-201ENST00000418518 IGSF5Q9NSI5 407 aa9.1□□□□□ -0.95
LINCMD1-201ENST00000418518 DNAJC28Q9NX36 388 aa9.1□□□□□ -0.95
LINCMD1-201ENST00000418518 SMPD4Q9NXE4 827 aa9.1□□□□□ -0.95
LINCMD1-201ENST00000418518 HEY2Q9UBP5 337 aa9.1□□□□□ -0.95
LINCMD1-201ENST00000418518 LSM7Q9UK45 103 aaKnown RBP9.1□□□□□ -0.95
LINCMD1-201ENST00000418518 ARHGAP26Q9UNA1 814 aa9.1□□□□□ -0.95
LINCMD1-201ENST00000418518 SORCS3Q9UPU3 1222 aa9.1□□□□□ -0.95
LINCMD1-201ENST00000418518 ACOT9Q9Y305 439 aa9.1□□□□□ -0.95
LINCMD1-201ENST00000418518 ACTL7AQ9Y615 435 aa9.1□□□□□ -0.95
LINCMD1-201ENST00000418518 TRAV19A0A0A6YYK7 116 aa9.09□□□□□ -0.95
LINCMD1-201ENST00000418518 CAPN14A8MX76 684 aa9.09□□□□□ -0.95
LINCMD1-201ENST00000418518 PALM2-AKAP2B1ALY0 433 aaPredicted RBP9.09□□□□□ -0.95
LINCMD1-201ENST00000418518 H7C0S8 307 aa9.09□□□□□ -0.95
LINCMD1-201ENST00000418518 FCHO1O14526 889 aa9.09□□□□□ -0.95
LINCMD1-201ENST00000418518 AURKAO14965 403 aa9.09□□□□□ -0.95
LINCMD1-201ENST00000418518 MGRN1O60291 552 aa9.09□□□□□ -0.95
LINCMD1-201ENST00000418518 SNUPNO95149 360 aaKnown RBP9.09□□□□□ -0.95
LINCMD1-201ENST00000418518 CRTAMO95727 393 aa9.09□□□□□ -0.95
LINCMD1-201ENST00000418518 FGF19O95750 216 aa9.09□□□□□ -0.95
LINCMD1-201ENST00000418518 GLUD1P00367 558 aa9.09□□□□□ -0.95
LINCMD1-201ENST00000418518 CD9P21926 228 aa9.09□□□□□ -0.95
LINCMD1-201ENST00000418518 FDXRP22570 491 aa9.09□□□□□ -0.95
LINCMD1-201ENST00000418518 MZF1P28698 734 aaPredicted RBP9.09□□□□□ -0.95
LINCMD1-201ENST00000418518 SERPINB3P29508 390 aa9.09□□□□□ -0.95
LINCMD1-201ENST00000418518 HOXA9P31269 272 aa9.09□□□□□ -0.95
LINCMD1-201ENST00000418518 BMPR1AP36894 532 aa9.09□□□□□ -0.95
LINCMD1-201ENST00000418518 SERPINB5P36952 375 aa9.09□□□□□ -0.95
LINCMD1-201ENST00000418518 NUMBP49757 651 aa9.09□□□□□ -0.95
LINCMD1-201ENST00000418518 PLK1P53350 603 aa9.09□□□□□ -0.95
LINCMD1-201ENST00000418518 DNAJB13P59910 316 aa9.09□□□□□ -0.95
LINCMD1-201ENST00000418518 AP1S1P61966 158 aa9.09□□□□□ -0.95
LINCMD1-201ENST00000418518 PRAMEP78395 509 aa9.09□□□□□ -0.95
LINCMD1-201ENST00000418518 ELF3P78545 371 aaPredicted RBP9.09□□□□□ -0.95
LINCMD1-201ENST00000418518 CYP4F8P98187 520 aa9.09□□□□□ -0.95
LINCMD1-201ENST00000418518 UBE3AQ05086 875 aa9.09□□□□□ -0.95
LINCMD1-201ENST00000418518 FPGSQ05932 587 aa9.09□□□□□ -0.95
LINCMD1-201ENST00000418518 ASPHQ12797 758 aa9.09□□□□□ -0.95
LINCMD1-201ENST00000418518 DLG1Q12959 904 aa9.09□□□□□ -0.95
LINCMD1-201ENST00000418518 TUBB3Q13509 450 aa9.09□□□□□ -0.95
LINCMD1-201ENST00000418518 ITGA9Q13797 1035 aa9.09□□□□□ -0.95
LINCMD1-201ENST00000418518 GALNT3Q14435 633 aa9.09□□□□□ -0.95
LINCMD1-201ENST00000418518 TTC31Q49AM3 519 aaPredicted RBP9.09□□□□□ -0.95
LINCMD1-201ENST00000418518 ZNF789Q5FWF6 425 aa9.09□□□□□ -0.95
LINCMD1-201ENST00000418518 FSCBQ5H9T9 825 aa9.09□□□□□ -0.95
LINCMD1-201ENST00000418518 TECRLQ5HYJ1 363 aa9.09□□□□□ -0.95
LINCMD1-201ENST00000418518 FAM45BPQ6NSW5 357 aa9.09□□□□□ -0.95
LINCMD1-201ENST00000418518 NAPRTQ6XQN6 538 aa9.09□□□□□ -0.95
LINCMD1-201ENST00000418518 METTL3Q86U44 580 aaKnown RBP9.09□□□□□ -0.95
LINCMD1-201ENST00000418518 WDR75Q8IWA0 830 aaKnown RBP9.09□□□□□ -0.95
LINCMD1-201ENST00000418518 HS6ST3Q8IZP7 471 aa9.09□□□□□ -0.95
LINCMD1-201ENST00000418518 ELMOD1Q8N336 334 aa9.09□□□□□ -0.95
LINCMD1-201ENST00000418518 FSTL5Q8N475 847 aaPredicted RBP9.09□□□□□ -0.95
LINCMD1-201ENST00000418518 TTC30BQ8N4P2 665 aa9.09□□□□□ -0.95
LINCMD1-201ENST00000418518 DNAJC5GQ8N7S2 189 aa9.09□□□□□ -0.95
LINCMD1-201ENST00000418518 PPP1R14CQ8TAE6 165 aa9.09□□□□□ -0.95
LINCMD1-201ENST00000418518 PHOSPHO2Q8TCD6 241 aa9.09□□□□□ -0.95
LINCMD1-201ENST00000418518 FAM45AQ8TCE6 357 aa9.09□□□□□ -0.95
LINCMD1-201ENST00000418518 WFDC5Q8TCV5 224 aa9.09□□□□□ -0.95
LINCMD1-201ENST00000418518 PPP4R1Q8TF05 950 aa9.09□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms