RNA–Protein interactions for RNA: ENST00000417628.6

ECHDC1-206, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 767 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-206ENST00000417628 ACOT7O00154 380 aa5.66□□□□□ -1.5
ECHDC1-206ENST00000417628 FOXP2O15409 715 aa5.66□□□□□ -1.5
ECHDC1-206ENST00000417628 IDH3BO43837 385 aa5.66□□□□□ -1.5
ECHDC1-206ENST00000417628 MAFKO60675 156 aa5.66□□□□□ -1.5
ECHDC1-206ENST00000417628 H2AFYO75367 372 aaKnown RBP5.66□□□□□ -1.5
ECHDC1-206ENST00000417628 RFPL1O75677 317 aa5.66□□□□□ -1.5
ECHDC1-206ENST00000417628 CYP17A1P05093 508 aa5.66□□□□□ -1.5
ECHDC1-206ENST00000417628 DBHP09172 617 aa5.66□□□□□ -1.5
ECHDC1-206ENST00000417628 TMEM253P0C7T8 217 aa5.66□□□□□ -1.5
ECHDC1-206ENST00000417628 HOXB2P14652 356 aa5.66□□□□□ -1.5
ECHDC1-206ENST00000417628 PNLIPP16233 465 aa5.66□□□□□ -1.5
ECHDC1-206ENST00000417628 CKMT2P17540 419 aa5.66□□□□□ -1.5
ECHDC1-206ENST00000417628 CD6P30203 668 aa5.66□□□□□ -1.5
ECHDC1-206ENST00000417628 CDC25CP30307 473 aa5.66□□□□□ -1.5
ECHDC1-206ENST00000417628 SDHAP31040 664 aa5.66□□□□□ -1.5
ECHDC1-206ENST00000417628 OPRD1P41143 372 aa5.66□□□□□ -1.5
ECHDC1-206ENST00000417628 MATR3P43243 847 aaKnown RBP eCLIP5.66□□□□□ -1.58e-7■■■■■ 31.9
ECHDC1-206ENST00000417628 IFNAR2P48551 515 aa5.66□□□□□ -1.5
ECHDC1-206ENST00000417628 POLE2P56282 527 aa5.66□□□□□ -1.5
ECHDC1-206ENST00000417628 CDK17Q00537 523 aa5.66□□□□□ -1.5
ECHDC1-206ENST00000417628 E2F1Q01094 437 aa5.66□□□□□ -1.5
ECHDC1-206ENST00000417628 PRKCEQ02156 737 aa5.66□□□□□ -1.5
ECHDC1-206ENST00000417628 WASHC5Q12768 1159 aa5.66□□□□□ -1.5
ECHDC1-206ENST00000417628 ODF1Q14990 250 aa5.66□□□□□ -1.5
ECHDC1-206ENST00000417628 SMTNL2Q2TAL5 461 aa5.66□□□□□ -1.5
ECHDC1-206ENST00000417628 LACTB2Q53H82 288 aaPredicted RBP5.66□□□□□ -1.5
ECHDC1-206ENST00000417628 C3orf38Q5JPI3 329 aa5.66□□□□□ -1.5
ECHDC1-206ENST00000417628 BTBD8Q5XKL5 378 aa5.66□□□□□ -1.5
ECHDC1-206ENST00000417628 WDR93Q6P2C0 686 aa5.66□□□□□ -1.5
ECHDC1-206ENST00000417628 PGM2L1Q6PCE3 622 aa5.66□□□□□ -1.5
ECHDC1-206ENST00000417628 NEK10Q6ZWH5 1172 aa5.66□□□□□ -1.5
ECHDC1-206ENST00000417628 CXXC5Q7LFL8 322 aaKnown RBP5.66□□□□□ -1.5
ECHDC1-206ENST00000417628 TRMT11Q7Z4G4 463 aaKnown RBP5.66□□□□□ -1.5
ECHDC1-206ENST00000417628 NANOGNBQ7Z5D8 188 aa5.66□□□□□ -1.5
ECHDC1-206ENST00000417628 PNPLA5Q7Z6Z6 429 aaPredicted RBP5.66□□□□□ -1.5
ECHDC1-206ENST00000417628 GATAD2AQ86YP4 633 aa5.66□□□□□ -1.5
ECHDC1-206ENST00000417628 DCP2Q8IU60 420 aaKnown RBP5.66□□□□□ -1.5
ECHDC1-206ENST00000417628 MCEMP1Q8IX19 187 aa5.66□□□□□ -1.5
ECHDC1-206ENST00000417628 DRC7Q8IY82 874 aa5.66□□□□□ -1.5
ECHDC1-206ENST00000417628 CCDC13Q8IYE1 715 aa5.66□□□□□ -1.5
ECHDC1-206ENST00000417628 SYCP3Q8IZU3 236 aa5.66□□□□□ -1.5
ECHDC1-206ENST00000417628 FUKQ8N0W3 1084 aa5.66□□□□□ -1.5
ECHDC1-206ENST00000417628 EID2Q8N6I1 236 aa5.66□□□□□ -1.5
ECHDC1-206ENST00000417628 NETO2Q8NC67 525 aa5.66□□□□□ -1.5
ECHDC1-206ENST00000417628 STKLD1Q8NE28 680 aa5.66□□□□□ -1.5
ECHDC1-206ENST00000417628 CADM4Q8NFZ8 388 aa5.66□□□□□ -1.5
ECHDC1-206ENST00000417628 RASSF8Q8NHQ8 419 aa5.66□□□□□ -1.5
ECHDC1-206ENST00000417628 GDAP1Q8TB36 358 aa5.66□□□□□ -1.5
ECHDC1-206ENST00000417628 PHOSPHO1Q8TCT1 267 aa5.66□□□□□ -1.5
ECHDC1-206ENST00000417628 CACTINQ8WUQ7 758 aaKnown RBP5.66□□□□□ -1.5
ECHDC1-206ENST00000417628 OSCP1Q8WVF1 389 aa5.66□□□□□ -1.5
ECHDC1-206ENST00000417628 USP13Q92995 863 aaPredicted RBP5.66□□□□□ -1.5
ECHDC1-206ENST00000417628 HPS3Q969F9 1004 aa5.66□□□□□ -1.5
ECHDC1-206ENST00000417628 RELTQ969Z4 430 aa5.66□□□□□ -1.5
ECHDC1-206ENST00000417628 AZIN2Q96A70 460 aa5.66□□□□□ -1.5
ECHDC1-206ENST00000417628 EPSTI1Q96J88 318 aa5.66□□□□□ -1.5
ECHDC1-206ENST00000417628 LURAP1Q96LR2 239 aa5.66□□□□□ -1.5
ECHDC1-206ENST00000417628 SLC46A1Q96NT5 459 aa5.66□□□□□ -1.5
ECHDC1-206ENST00000417628 ACAP3Q96P50 834 aa5.66□□□□□ -1.5
ECHDC1-206ENST00000417628 PARVBQ9HBI1 364 aa5.66□□□□□ -1.5
ECHDC1-206ENST00000417628 TCF7L1Q9HCS4 588 aa5.66□□□□□ -1.5
ECHDC1-206ENST00000417628 ZNF304Q9HCX3 659 aa5.66□□□□□ -1.5
ECHDC1-206ENST00000417628 TNFRSF12AQ9NP84 129 aa5.66□□□□□ -1.5
ECHDC1-206ENST00000417628 CASS4Q9NQ75 786 aa5.66□□□□□ -1.5
ECHDC1-206ENST00000417628 NRBP2Q9NSY0 501 aa5.66□□□□□ -1.5
ECHDC1-206ENST00000417628 TDP1Q9NUW8 608 aa5.66□□□□□ -1.5
ECHDC1-206ENST00000417628 SDAD1Q9NVU7 687 aaKnown RBP eCLIP5.66□□□□□ -1.5
ECHDC1-206ENST00000417628 UBAP1Q9NZ09 502 aa5.66□□□□□ -1.5
ECHDC1-206ENST00000417628 SUCLA2Q9P2R7 463 aaPredicted RBP5.66□□□□□ -1.5
ECHDC1-206ENST00000417628 EIF2B4Q9UI10 523 aaKnown RBP5.66□□□□□ -1.5
ECHDC1-206ENST00000417628 XPO7Q9UIA9 1087 aaKnown RBP5.66□□□□□ -1.5
ECHDC1-206ENST00000417628 GPR160Q9UJ42 338 aa5.66□□□□□ -1.5
ECHDC1-206ENST00000417628 FBXL5Q9UKA1 691 aa5.66□□□□□ -1.5
ECHDC1-206ENST00000417628 GTF3C4Q9UKN8 822 aa5.66□□□□□ -1.5
ECHDC1-206ENST00000417628 TMCC3Q9ULS5 477 aa5.66□□□□□ -1.5
ECHDC1-206ENST00000417628 SATB2Q9UPW6 733 aa5.66□□□□□ -1.5
ECHDC1-206ENST00000417628 PRELID1Q9Y255 219 aa5.66□□□□□ -1.5
ECHDC1-206ENST00000417628 PCDHB4Q9Y5E5 795 aa5.66□□□□□ -1.5
ECHDC1-206ENST00000417628 MED13Q9UHV7 2174 aa5.66□□□□□ -1.5
ECHDC1-206ENST00000417628 BSNQ9UPA5 3926 aa5.65□□□□□ -1.5
ECHDC1-206ENST00000417628 A0A1B0GTQ1 180 aa5.65□□□□□ -1.5
ECHDC1-206ENST00000417628 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP5.65□□□□□ -1.5
ECHDC1-206ENST00000417628 A0A1W2PQJ5 194 aa5.65□□□□□ -1.5
ECHDC1-206ENST00000417628 CFAP73A6NFT4 308 aa5.65□□□□□ -1.5
ECHDC1-206ENST00000417628 CDRT15L2A8MXV6 281 aa5.65□□□□□ -1.5
ECHDC1-206ENST00000417628 BOLA2-SMG1P6H3BVE0 249 aa5.65□□□□□ -1.5
ECHDC1-206ENST00000417628 NDUFAB1O14561 156 aa5.65□□□□□ -1.5
ECHDC1-206ENST00000417628 SGTAO43765 313 aa5.65□□□□□ -1.5
ECHDC1-206ENST00000417628 CSO75390 466 aaKnown RBP5.65□□□□□ -1.5
ECHDC1-206ENST00000417628 B3GAT3O94766 335 aa5.65□□□□□ -1.5
ECHDC1-206ENST00000417628 RNASE1P07998 156 aaKnown RBP5.65□□□□□ -1.5
ECHDC1-206ENST00000417628 PCP11498 1178 aaKnown RBP5.65□□□□□ -1.5
ECHDC1-206ENST00000417628 ABCB4P21439 1286 aa5.65□□□□□ -1.5
ECHDC1-206ENST00000417628 AXLP30530 894 aa5.65□□□□□ -1.5
ECHDC1-206ENST00000417628 CSTF2P33240 577 aaKnown RBP eCLIP5.65□□□□□ -1.5
ECHDC1-206ENST00000417628 CCT5P48643 541 aa5.65□□□□□ -1.5
ECHDC1-206ENST00000417628 PMS2P54278 862 aa5.65□□□□□ -1.5
ECHDC1-206ENST00000417628 KRT85P78386 507 aa5.65□□□□□ -1.5
ECHDC1-206ENST00000417628 GRIN1Q05586 938 aa5.65□□□□□ -1.5
ECHDC1-206ENST00000417628 MTF1Q14872 753 aa5.65□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms