RNA–Protein interactions for RNA: ENST00000416688.5

CTDSPL-203, Transcript of CTD small phosphatase like, humanhuman

TSL 3

Gene CTDSPL, Length 368 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL-203ENST00000416688 CTSKP43235 329 aa3.17□□□□□ -1.9
CTDSPL-203ENST00000416688 PREPP48147 710 aa3.17□□□□□ -1.9
CTDSPL-203ENST00000416688 SLC11A2P49281 568 aa3.17□□□□□ -1.9
CTDSPL-203ENST00000416688 ARSEP51690 589 aa3.17□□□□□ -1.9
CTDSPL-203ENST00000416688 PDE1AP54750 535 aa3.17□□□□□ -1.9
CTDSPL-203ENST00000416688 EPHA5P54756 1037 aa3.17□□□□□ -1.9
CTDSPL-203ENST00000416688 OXCT1P55809 520 aa3.17□□□□□ -1.9
CTDSPL-203ENST00000416688 HUNKP57058 714 aa3.17□□□□□ -1.9
CTDSPL-203ENST00000416688 TAS2R40P59535 323 aa3.17□□□□□ -1.9
CTDSPL-203ENST00000416688 KRT76Q01546 638 aa3.17□□□□□ -1.9
CTDSPL-203ENST00000416688 TNK2Q07912 1038 aa3.17□□□□□ -1.9
CTDSPL-203ENST00000416688 KCNMA1Q12791 1236 aa3.17□□□□□ -1.9
CTDSPL-203ENST00000416688 ASPHQ12797 758 aa3.17□□□□□ -1.9
CTDSPL-203ENST00000416688 GPS2Q13227 327 aa3.17□□□□□ -1.9
CTDSPL-203ENST00000416688 PPIGQ13427 754 aaKnown RBP eCLIP3.17□□□□□ -1.9
CTDSPL-203ENST00000416688 BYSLQ13895 437 aaKnown RBP3.17□□□□□ -1.9
CTDSPL-203ENST00000416688 CYLC2Q14093 348 aaPredicted RBP3.17□□□□□ -1.9
CTDSPL-203ENST00000416688 TTLL4Q14679 1199 aa3.17□□□□□ -1.9
CTDSPL-203ENST00000416688 CHRNA6Q15825 494 aa3.17□□□□□ -1.9
CTDSPL-203ENST00000416688 AANATQ16613 207 aa3.17□□□□□ -1.9
CTDSPL-203ENST00000416688 SLC36A3Q495N2 470 aa3.17□□□□□ -1.9
CTDSPL-203ENST00000416688 SLC9B1Q4ZJI4 515 aa3.17□□□□□ -1.9
CTDSPL-203ENST00000416688 IFI44LQ53G44 452 aa3.17□□□□□ -1.9
CTDSPL-203ENST00000416688 IGSF11Q5DX21 431 aa3.17□□□□□ -1.9
CTDSPL-203ENST00000416688 PRRT3Q5FWE3 981 aa3.17□□□□□ -1.9
CTDSPL-203ENST00000416688 C6orf136Q5SQH8 315 aa3.17□□□□□ -1.9
CTDSPL-203ENST00000416688 FAM182BQ5T319 152 aa3.17□□□□□ -1.9
CTDSPL-203ENST00000416688 MROH9Q5TGP6 573 aa3.17□□□□□ -1.9
CTDSPL-203ENST00000416688 FAM91A1Q658Y4 838 aa3.17□□□□□ -1.9
CTDSPL-203ENST00000416688 PMF1Q6P1K2 205 aa3.17□□□□□ -1.9
CTDSPL-203ENST00000416688 CASC4Q6P4E1 433 aa3.17□□□□□ -1.9
CTDSPL-203ENST00000416688 CYP2R1Q6VVX0 501 aa3.17□□□□□ -1.9
CTDSPL-203ENST00000416688 GAREM2Q75VX8 874 aa3.17□□□□□ -1.9
CTDSPL-203ENST00000416688 MTSS1LQ765P7 747 aa3.17□□□□□ -1.9
CTDSPL-203ENST00000416688 TRMT10CQ7L0Y3 403 aaKnown RBP3.17□□□□□ -1.9
CTDSPL-203ENST00000416688 ZNF551Q7Z340 670 aaPredicted RBP3.17□□□□□ -1.9
CTDSPL-203ENST00000416688 PNPLA5Q7Z6Z6 429 aaPredicted RBP3.17□□□□□ -1.9
CTDSPL-203ENST00000416688 KIAA1328Q86T90 577 aa3.17□□□□□ -1.9
CTDSPL-203ENST00000416688 BIVMQ86UB2 503 aa3.17□□□□□ -1.9
CTDSPL-203ENST00000416688 ZNF410Q86VK4 478 aa3.17□□□□□ -1.9
CTDSPL-203ENST00000416688 CPNE8Q86YQ8 564 aa3.17□□□□□ -1.9
CTDSPL-203ENST00000416688 REXO1L1PQ8IX06 675 aa3.17□□□□□ -1.9
CTDSPL-203ENST00000416688 SRRM1Q8IYB3 904 aaKnown RBP3.17□□□□□ -1.9
CTDSPL-203ENST00000416688 Q8N1Y9 231 aa3.17□□□□□ -1.9
CTDSPL-203ENST00000416688 IL22RA1Q8N6P7 574 aa3.17□□□□□ -1.9
CTDSPL-203ENST00000416688 DDX51Q8N8A6 666 aaKnown RBP eCLIP3.17□□□□□ -1.9
CTDSPL-203ENST00000416688 PIK3C3Q8NEB9 887 aa3.17□□□□□ -1.9
CTDSPL-203ENST00000416688 OR9A1PQ8NGU1 263 aa3.17□□□□□ -1.9
CTDSPL-203ENST00000416688 OR10T2Q8NGX3 314 aa3.17□□□□□ -1.9
CTDSPL-203ENST00000416688 CAGE1Q8TC20 777 aa3.17□□□□□ -1.9
CTDSPL-203ENST00000416688 ATP8B4Q8TF62 1192 aa3.17□□□□□ -1.9
CTDSPL-203ENST00000416688 CHURC1Q8WUH1 139 aa3.17□□□□□ -1.9
CTDSPL-203ENST00000416688 NUDT8Q8WV74 236 aa3.17□□□□□ -1.9
CTDSPL-203ENST00000416688 ASB15Q8WXK1 588 aa3.17□□□□□ -1.9
CTDSPL-203ENST00000416688 STARD8Q92502 1023 aa3.17□□□□□ -1.9
CTDSPL-203ENST00000416688 PPP2R3CQ969Q6 453 aa3.17□□□□□ -1.9
CTDSPL-203ENST00000416688 MIB2Q96AX9 1013 aa3.17□□□□□ -1.9
CTDSPL-203ENST00000416688 FOXRED1Q96CU9 486 aaPredicted RBP3.17□□□□□ -1.9
CTDSPL-203ENST00000416688 RNF31Q96EP0 1072 aa3.17□□□□□ -1.9
CTDSPL-203ENST00000416688 HMCESQ96FZ2 354 aa3.17□□□□□ -1.9
CTDSPL-203ENST00000416688 TOE1Q96GM8 510 aaKnown RBP3.17□□□□□ -1.9
CTDSPL-203ENST00000416688 ZBED3Q96IU2 234 aaPredicted RBP3.17□□□□□ -1.9
CTDSPL-203ENST00000416688 FAM227BQ96M60 508 aa3.17□□□□□ -1.9
CTDSPL-203ENST00000416688 ZNF560Q96MR9 790 aa3.17□□□□□ -1.9
CTDSPL-203ENST00000416688 SECISBP2Q96T21 854 aaKnown RBP3.17□□□□□ -1.9
CTDSPL-203ENST00000416688 PAFAH2Q99487 392 aa3.17□□□□□ -1.9
CTDSPL-203ENST00000416688 GPA33Q99795 319 aa3.17□□□□□ -1.9
CTDSPL-203ENST00000416688 TSG101Q99816 390 aa3.17□□□□□ -1.9
CTDSPL-203ENST00000416688 JPH2Q9BR39 696 aaPredicted RBP3.17□□□□□ -1.9
CTDSPL-203ENST00000416688 INPP5KQ9BT40 448 aa3.17□□□□□ -1.9
CTDSPL-203ENST00000416688 TRIM62Q9BVG3 475 aa3.17□□□□□ -1.9
CTDSPL-203ENST00000416688 C1QTNF1Q9BXJ1 281 aa3.17□□□□□ -1.9
CTDSPL-203ENST00000416688 SIK2Q9H0K1 926 aa3.17□□□□□ -1.9
CTDSPL-203ENST00000416688 SLC25A32Q9H2D1 315 aa3.17□□□□□ -1.9
CTDSPL-203ENST00000416688 HRH4Q9H3N8 390 aa3.17□□□□□ -1.9
CTDSPL-203ENST00000416688 SPACA1Q9HBV2 294 aa3.17□□□□□ -1.9
CTDSPL-203ENST00000416688 GCM1Q9NP62 436 aa3.17□□□□□ -1.9
CTDSPL-203ENST00000416688 SLAMF7Q9NQ25 335 aa3.17□□□□□ -1.9
CTDSPL-203ENST00000416688 XPNPEP3Q9NQH7 507 aa3.17□□□□□ -1.9
CTDSPL-203ENST00000416688 SDHAF3Q9NRP4 125 aa3.17□□□□□ -1.9
CTDSPL-203ENST00000416688 TMEM140Q9NV12 185 aa3.17□□□□□ -1.9
CTDSPL-203ENST00000416688 ETNK2Q9NVF9 386 aa3.17□□□□□ -1.9
CTDSPL-203ENST00000416688 DNAJC11Q9NVH1 559 aa3.17□□□□□ -1.9
CTDSPL-203ENST00000416688 RLIMQ9NVW2 624 aa3.17□□□□□ -1.9
CTDSPL-203ENST00000416688 TMEM161AQ9NX61 479 aa3.17□□□□□ -1.9
CTDSPL-203ENST00000416688 ERVK13-1Q9NX77 482 aa3.17□□□□□ -1.9
CTDSPL-203ENST00000416688 BARHL2Q9NY43 387 aa3.17□□□□□ -1.9
CTDSPL-203ENST00000416688 ETAA1Q9NY74 926 aa3.17□□□□□ -1.9
CTDSPL-203ENST00000416688 GDE1Q9NZC3 331 aa3.17□□□□□ -1.9
CTDSPL-203ENST00000416688 OGFRQ9NZT2 677 aa3.17□□□□□ -1.9
CTDSPL-203ENST00000416688 GMPR2Q9P2T1 348 aaKnown RBP3.17□□□□□ -1.9
CTDSPL-203ENST00000416688 DNAJB11Q9UBS4 358 aa3.17□□□□□ -1.9
CTDSPL-203ENST00000416688 FTSJ1Q9UET6 329 aa3.17□□□□□ -1.9
CTDSPL-203ENST00000416688 IL17BQ9UHF5 180 aa3.17□□□□□ -1.9
CTDSPL-203ENST00000416688 FBXL7Q9UJT9 491 aa3.17□□□□□ -1.9
CTDSPL-203ENST00000416688 PADI1Q9ULC6 663 aa3.17□□□□□ -1.9
CTDSPL-203ENST00000416688 KIAA1257Q9ULG3 409 aa3.17□□□□□ -1.9
CTDSPL-203ENST00000416688 HBS1LQ9Y450 684 aaKnown RBP3.17□□□□□ -1.9
CTDSPL-203ENST00000416688 ACTL7AQ9Y615 435 aa3.17□□□□□ -1.9
CTDSPL-203ENST00000416688 X6R8D5 127 aa3.17□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms