RNA–Protein interactions for RNA: ENST00000416426.6

MSI2-203, Transcript of musashi RNA binding protein 2, humanhuman

TSL 2 BASIC

Gene MSI2, Length 1,714 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSI2-203ENST00000416426 PALM2-AKAP2B1ALY0 433 aaPredicted RBP18.34■□□□□ 0.53
MSI2-203ENST00000416426 CBX4O00257 560 aa18.34■□□□□ 0.53
MSI2-203ENST00000416426 FCHO1O14526 889 aa18.34■□□□□ 0.53
MSI2-203ENST00000416426 KLHL2O95198 593 aa18.34■□□□□ 0.53
MSI2-203ENST00000416426 LUC7L3O95232 432 aaKnown RBP18.34■□□□□ 0.53
MSI2-203ENST00000416426 S1PR4O95977 384 aa18.34■□□□□ 0.53
MSI2-203ENST00000416426 SAT1P21673 171 aa18.34■□□□□ 0.53
MSI2-203ENST00000416426 AVPR1AP37288 418 aa18.34■□□□□ 0.53
MSI2-203ENST00000416426 NUMBP49757 651 aa18.34■□□□□ 0.53
MSI2-203ENST00000416426 PRAMEP78395 509 aa18.34■□□□□ 0.53
MSI2-203ENST00000416426 SLC7A9P82251 487 aa18.34■□□□□ 0.53
MSI2-203ENST00000416426 ZBTB16Q05516 673 aa18.34■□□□□ 0.53
MSI2-203ENST00000416426 ZNF789Q5FWF6 425 aa18.34■□□□□ 0.53
MSI2-203ENST00000416426 LRRC8EQ6NSJ5 796 aa18.34■□□□□ 0.53
MSI2-203ENST00000416426 CCDC149Q6ZUS6 474 aa18.34■□□□□ 0.53
MSI2-203ENST00000416426 GAREM2Q75VX8 874 aa18.34■□□□□ 0.53
MSI2-203ENST00000416426 PPP4R1Q8TF05 950 aa18.34■□□□□ 0.53
MSI2-203ENST00000416426 MRPS31Q92665 395 aaKnown RBP18.34■□□□□ 0.53
MSI2-203ENST00000416426 TDRD1Q9BXT4 1180 aaKnown RBP18.34■□□□□ 0.53
MSI2-203ENST00000416426 MUC3BQ9H195 1237 aa18.34■□□□□ 0.53
MSI2-203ENST00000416426 FAM96AQ9H5X1 160 aa18.34■□□□□ 0.53
MSI2-203ENST00000416426 SCUBE2Q9NQ36 999 aa18.34■□□□□ 0.53
MSI2-203ENST00000416426 DNMT3BQ9UBC3 853 aaKnown RBP18.34■□□□□ 0.53
MSI2-203ENST00000416426 MARCOQ9UEW3 520 aaPredicted RBP18.34■□□□□ 0.53
MSI2-203ENST00000416426 HAO1Q9UJM8 370 aa18.34■□□□□ 0.53
MSI2-203ENST00000416426 RPP40O75818 363 aaKnown RBP18.33■□□□□ 0.52
MSI2-203ENST00000416426 CBX6O95503 412 aa18.33■□□□□ 0.52
MSI2-203ENST00000416426 PRLP01236 227 aa18.33■□□□□ 0.52
MSI2-203ENST00000416426 KITP10721 976 aa18.33■□□□□ 0.52
MSI2-203ENST00000416426 GABRR2P28476 465 aa18.33■□□□□ 0.52
MSI2-203ENST00000416426 HNRNPH1P31943 449 aaKnown RBP18.33■□□□□ 0.52
MSI2-203ENST00000416426 RASSF2P50749 326 aa18.33■□□□□ 0.52
MSI2-203ENST00000416426 DLG1Q12959 904 aa18.33■□□□□ 0.52
MSI2-203ENST00000416426 INO80DQ53TQ3 878 aaPredicted RBP18.33■□□□□ 0.52
MSI2-203ENST00000416426 FSCBQ5H9T9 825 aa18.33■□□□□ 0.52
MSI2-203ENST00000416426 RBM20Q5T481 1227 aaKnown RBP18.33■□□□□ 0.52
MSI2-203ENST00000416426 PTAR1Q7Z6K3 402 aaPredicted RBP18.33■□□□□ 0.52
MSI2-203ENST00000416426 GPATCH11Q8N954 259 aa18.33■□□□□ 0.52
MSI2-203ENST00000416426 BLOC1S5Q8TDH9 187 aa18.33■□□□□ 0.52
MSI2-203ENST00000416426 PTCD3Q96EY7 689 aaKnown RBP18.33■□□□□ 0.52
MSI2-203ENST00000416426 ALG14Q96F25 216 aa18.33■□□□□ 0.52
MSI2-203ENST00000416426 ARL5AQ9Y689 179 aa18.33■□□□□ 0.52
MSI2-203ENST00000416426 H0Y626 953 aa18.32■□□□□ 0.52
MSI2-203ENST00000416426 CXCL14O95715 111 aa18.32■□□□□ 0.52
MSI2-203ENST00000416426 LRG1P02750 347 aa18.32■□□□□ 0.52
MSI2-203ENST00000416426 KRT16P08779 473 aa18.32■□□□□ 0.52
MSI2-203ENST00000416426 MZF1P28698 734 aaPredicted RBP18.32■□□□□ 0.52
MSI2-203ENST00000416426 SCNN1BP51168 640 aa18.32■□□□□ 0.52
MSI2-203ENST00000416426 PGGT1BP53609 377 aa18.32■□□□□ 0.52
MSI2-203ENST00000416426 SLC12A2P55011 1212 aa18.32■□□□□ 0.52
MSI2-203ENST00000416426 NAPRTQ6XQN6 538 aa18.32■□□□□ 0.52
MSI2-203ENST00000416426 HTR3DQ70Z44 454 aa18.32■□□□□ 0.52
MSI2-203ENST00000416426 HS6ST3Q8IZP7 471 aa18.32■□□□□ 0.52
MSI2-203ENST00000416426 CPXM2Q8N436 756 aa18.32■□□□□ 0.52
MSI2-203ENST00000416426 FSTL5Q8N475 847 aaPredicted RBP18.32■□□□□ 0.52
MSI2-203ENST00000416426 CARNMT1Q8N4J0 409 aa18.32■□□□□ 0.52
MSI2-203ENST00000416426 KIF2BQ8N4N8 673 aa18.32■□□□□ 0.52
MSI2-203ENST00000416426 KLHL23Q8NBE8 558 aa18.32■□□□□ 0.52
MSI2-203ENST00000416426 OR6P1Q8NGX9 317 aa18.32■□□□□ 0.52
MSI2-203ENST00000416426 NXNL1Q96CM4 212 aa18.32■□□□□ 0.52
MSI2-203ENST00000416426 TMA16Q96EY4 203 aaKnown RBP18.32■□□□□ 0.52
MSI2-203ENST00000416426 TSPAN17Q96FV3 270 aa18.32■□□□□ 0.52
MSI2-203ENST00000416426 DNAJC1Q96KC8 554 aaKnown RBP18.32■□□□□ 0.52
MSI2-203ENST00000416426 TBATAQ96M53 351 aa18.32■□□□□ 0.52
MSI2-203ENST00000416426 OLFM1Q99784 485 aa18.32■□□□□ 0.52
MSI2-203ENST00000416426 FEM1AQ9BSK4 669 aa18.32■□□□□ 0.52
MSI2-203ENST00000416426 GATA5Q9BWX5 397 aaPredicted RBP18.32■□□□□ 0.52
MSI2-203ENST00000416426 MARCH4Q9P2E8 410 aaPredicted RBP18.32■□□□□ 0.52
MSI2-203ENST00000416426 LHX3Q9UBR4 397 aa18.32■□□□□ 0.52
MSI2-203ENST00000416426 ZNF510Q9Y2H8 683 aa18.32■□□□□ 0.52
MSI2-203ENST00000416426 MKI67P46013 3256 aaKnown RBP18.32■□□□□ 0.52
MSI2-203ENST00000416426 TYW5A2RUC4 315 aaKnown RBP18.32■□□□□ 0.52
MSI2-203ENST00000416426 TK2O00142 265 aa18.32■□□□□ 0.52
MSI2-203ENST00000416426 SNAP91O60641 907 aa18.32■□□□□ 0.52
MSI2-203ENST00000416426 TMCC1O94876 653 aa18.32■□□□□ 0.52
MSI2-203ENST00000416426 WISP3O95389 354 aaPredicted RBP18.32■□□□□ 0.52
MSI2-203ENST00000416426 FGBP02675 491 aa18.32■□□□□ 0.52
MSI2-203ENST00000416426 ADH1AP07327 375 aa18.32■□□□□ 0.52
MSI2-203ENST00000416426 PFKLP17858 780 aa18.32■□□□□ 0.52
MSI2-203ENST00000416426 KPNA2P52292 529 aaKnown RBP18.32■□□□□ 0.52
MSI2-203ENST00000416426 ZNF140P52738 457 aaPredicted RBP18.32■□□□□ 0.52
MSI2-203ENST00000416426 CYP4F8P98187 520 aa18.32■□□□□ 0.52
MSI2-203ENST00000416426 PPIGQ13427 754 aaKnown RBP eCLIP18.32■□□□□ 0.523e-7■■□□□ 13.2
MSI2-203ENST00000416426 TUBB3Q13509 450 aa18.32■□□□□ 0.52
MSI2-203ENST00000416426 ZNF460Q14592 562 aa18.32■□□□□ 0.52
MSI2-203ENST00000416426 LIPMQ5VYY2 423 aa18.32■□□□□ 0.52
MSI2-203ENST00000416426 ALYREFQ86V81 257 aaKnown RBP18.32■□□□□ 0.52
MSI2-203ENST00000416426 PRR11Q96HE9 360 aaPredicted RBP18.32■□□□□ 0.52
MSI2-203ENST00000416426 NSL1Q96IY1 281 aa18.32■□□□□ 0.52
MSI2-203ENST00000416426 NMUR2Q9GZQ4 415 aa18.32■□□□□ 0.52
MSI2-203ENST00000416426 IGSF5Q9NSI5 407 aa18.32■□□□□ 0.52
MSI2-203ENST00000416426 ARL8BQ9NVJ2 186 aa18.32■□□□□ 0.52
MSI2-203ENST00000416426 PNPOQ9NVS9 261 aa18.32■□□□□ 0.52
MSI2-203ENST00000416426 NLE1Q9NVX2 485 aaPredicted RBP18.32■□□□□ 0.52
MSI2-203ENST00000416426 DNAJC28Q9NX36 388 aa18.32■□□□□ 0.52
MSI2-203ENST00000416426 PCDH10Q9P2E7 1040 aa18.32■□□□□ 0.52
MSI2-203ENST00000416426 CPSF2Q9P2I0 782 aaKnown RBP18.32■□□□□ 0.52
MSI2-203ENST00000416426 LSM7Q9UK45 103 aaKnown RBP18.32■□□□□ 0.52
MSI2-203ENST00000416426 CORO1CQ9ULV4 474 aaPredicted RBP18.32■□□□□ 0.52
MSI2-203ENST00000416426 INSL6Q9Y581 213 aa18.32■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms