RNA–Protein interactions for RNA: ENST00000414802.5

CNOT4-204, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

TSL 1 (best) BASIC

Gene CNOT4, Length 1,687 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-204ENST00000414802 ANAPC5Q9UJX4 755 aa13.21□□□□□ -0.3
CNOT4-204ENST00000414802 ITM2BQ9Y287 266 aa13.21□□□□□ -0.3
CNOT4-204ENST00000414802 LOC285095A0A1B0GVY8 99 aa13.2□□□□□ -0.3
CNOT4-204ENST00000414802 TSPAN11A1L157 253 aa13.2□□□□□ -0.3
CNOT4-204ENST00000414802 TNFRSF10AO00220 468 aa13.2□□□□□ -0.3
CNOT4-204ENST00000414802 PSMD3O43242 534 aa13.2□□□□□ -0.3
CNOT4-204ENST00000414802 BANF1O75531 89 aa13.2□□□□□ -0.3
CNOT4-204ENST00000414802 SUN1O94901 812 aa13.2□□□□□ -0.3
CNOT4-204ENST00000414802 NDST3O95803 873 aa13.2□□□□□ -0.3
CNOT4-204ENST00000414802 DNTTP04053 509 aa13.2□□□□□ -0.3
CNOT4-204ENST00000414802 ABL2P42684 1182 aa13.2□□□□□ -0.3
CNOT4-204ENST00000414802 TNNT3P45378 269 aaPredicted RBP13.2□□□□□ -0.3
CNOT4-204ENST00000414802 EPHB1P54762 984 aa13.2□□□□□ -0.3
CNOT4-204ENST00000414802 CALCOCO2Q13137 446 aa13.2□□□□□ -0.3
CNOT4-204ENST00000414802 SLC1A5Q15758 541 aa13.2□□□□□ -0.3
CNOT4-204ENST00000414802 QPCTQ16769 361 aa13.2□□□□□ -0.3
CNOT4-204ENST00000414802 ERCC6LQ2NKX8 1250 aa13.2□□□□□ -0.3
CNOT4-204ENST00000414802 FAM46CQ5VWP2 391 aa13.2□□□□□ -0.3
CNOT4-204ENST00000414802 NAPEPLDQ6IQ20 393 aa13.2□□□□□ -0.3
CNOT4-204ENST00000414802 DENND5AQ6IQ26 1287 aa13.2□□□□□ -0.3
CNOT4-204ENST00000414802 ZDHHC24Q6UX98 284 aa13.2□□□□□ -0.3
CNOT4-204ENST00000414802 GSPT2Q8IYD1 628 aaKnown RBP13.2□□□□□ -0.3
CNOT4-204ENST00000414802 GANCQ8TET4 914 aa13.2□□□□□ -0.3
CNOT4-204ENST00000414802 PIH1D2Q8WWB5 315 aa13.2□□□□□ -0.3
CNOT4-204ENST00000414802 IFT81Q8WYA0 676 aa13.2□□□□□ -0.3
CNOT4-204ENST00000414802 PPP1R16AQ96I34 528 aa13.2□□□□□ -0.3
CNOT4-204ENST00000414802 LRIG1Q96JA1 1093 aa13.2□□□□□ -0.3
CNOT4-204ENST00000414802 ANKZF1Q9H8Y5 726 aa13.2□□□□□ -0.3
CNOT4-204ENST00000414802 DYRK4Q9NR20 520 aa13.2□□□□□ -0.3
CNOT4-204ENST00000414802 WHRNQ9P202 907 aa13.2□□□□□ -0.3
CNOT4-204ENST00000414802 GGT7Q9UJ14 662 aa13.2□□□□□ -0.3
CNOT4-204ENST00000414802 PLXNB3Q9ULL4 1909 aa13.2□□□□□ -0.3
CNOT4-204ENST00000414802 ERI2A8K979 691 aaKnown RBP13.19□□□□□ -0.3
CNOT4-204ENST00000414802 UPK3BL1B0FP48 263 aa13.19□□□□□ -0.3
CNOT4-204ENST00000414802 UPK3BL2E5RIL1 263 aa13.19□□□□□ -0.3
CNOT4-204ENST00000414802 SPINT1O43278 529 aa13.19□□□□□ -0.3
CNOT4-204ENST00000414802 RNASEH2AO75792 299 aaKnown RBP13.19□□□□□ -0.3
CNOT4-204ENST00000414802 SLC4A1P02730 911 aa13.19□□□□□ -0.3
CNOT4-204ENST00000414802 TIMP2P16035 220 aa13.19□□□□□ -0.3
CNOT4-204ENST00000414802 TPH1P17752 444 aa13.19□□□□□ -0.3
CNOT4-204ENST00000414802 P2RY2P41231 377 aa13.19□□□□□ -0.3
CNOT4-204ENST00000414802 MAGEA9P43362 315 aa13.19□□□□□ -0.3
CNOT4-204ENST00000414802 CARSP49589 748 aaKnown RBP13.19□□□□□ -0.3
CNOT4-204ENST00000414802 PLTPP55058 493 aa13.19□□□□□ -0.3
CNOT4-204ENST00000414802 SESN2P58004 480 aaPredicted RBP13.19□□□□□ -0.3
CNOT4-204ENST00000414802 MORF4L2Q15014 288 aa13.19□□□□□ -0.3
CNOT4-204ENST00000414802 BRAT1Q6PJG6 821 aa13.19□□□□□ -0.3
CNOT4-204ENST00000414802 FAM124AQ86V42 546 aa13.19□□□□□ -0.3
CNOT4-204ENST00000414802 HOOK3Q86VS8 718 aa13.19□□□□□ -0.3
CNOT4-204ENST00000414802 HDDC3Q8N4P3 179 aa13.19□□□□□ -0.3
CNOT4-204ENST00000414802 DNAAF3Q8N9W5 541 aa13.19□□□□□ -0.3
CNOT4-204ENST00000414802 FBXO25Q8TCJ0 367 aa13.19□□□□□ -0.3
CNOT4-204ENST00000414802 SEC14L1Q92503 715 aa13.19□□□□□ -0.3
CNOT4-204ENST00000414802 UBXN4Q92575 508 aa13.19□□□□□ -0.3
CNOT4-204ENST00000414802 SHOC2Q9UQ13 582 aa13.19□□□□□ -0.3
CNOT4-204ENST00000414802 SPO11Q9Y5K1 396 aa13.19□□□□□ -0.3
CNOT4-204ENST00000414802 A8MX80 341 aa13.18□□□□□ -0.3
CNOT4-204ENST00000414802 AVILO75366 819 aa13.18□□□□□ -0.3
CNOT4-204ENST00000414802 FGF1P05230 155 aa13.18□□□□□ -0.3
CNOT4-204ENST00000414802 ACADMP11310 421 aa13.18□□□□□ -0.3
CNOT4-204ENST00000414802 ADRB3P13945 408 aa13.18□□□□□ -0.3
CNOT4-204ENST00000414802 HLA-DPA1P20036 260 aa13.18□□□□□ -0.3
CNOT4-204ENST00000414802 C5AR1P21730 350 aa13.18□□□□□ -0.3
CNOT4-204ENST00000414802 XPAP23025 273 aaPredicted RBP13.18□□□□□ -0.3
CNOT4-204ENST00000414802 CXCL12P48061 93 aa13.18□□□□□ -0.3
CNOT4-204ENST00000414802 CCR3P51677 355 aa13.18□□□□□ -0.3
CNOT4-204ENST00000414802 CLCN5P51795 746 aa13.18□□□□□ -0.3
CNOT4-204ENST00000414802 NEK3P51956 506 aa13.18□□□□□ -0.3
CNOT4-204ENST00000414802 DMWDQ09019 674 aa13.18□□□□□ -0.3
CNOT4-204ENST00000414802 HLTFQ14527 1009 aaKnown RBP eCLIP13.18□□□□□ -0.3
CNOT4-204ENST00000414802 TTC31Q49AM3 519 aaPredicted RBP13.18□□□□□ -0.3
CNOT4-204ENST00000414802 PIP5KL1Q5T9C9 394 aa13.18□□□□□ -0.3
CNOT4-204ENST00000414802 AGBL4Q5VU57 503 aa13.18□□□□□ -0.3
CNOT4-204ENST00000414802 DENND2CQ68D51 928 aa13.18□□□□□ -0.3
CNOT4-204ENST00000414802 FBXL19Q6PCT2 694 aa13.18□□□□□ -0.3
CNOT4-204ENST00000414802 TSSK4Q6SA08 328 aa13.18□□□□□ -0.3
CNOT4-204ENST00000414802 RANBP10Q6VN20 620 aa13.18□□□□□ -0.3
CNOT4-204ENST00000414802 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP13.18□□□□□ -0.3
CNOT4-204ENST00000414802 ERN2Q76MJ5 926 aaKnown RBP13.18□□□□□ -0.3
CNOT4-204ENST00000414802 PCGF5Q86SE9 256 aa13.18□□□□□ -0.3
CNOT4-204ENST00000414802 CAND1Q86VP6 1230 aaKnown RBP13.18□□□□□ -0.3
CNOT4-204ENST00000414802 BLOC1S5Q8TDH9 187 aa13.18□□□□□ -0.3
CNOT4-204ENST00000414802 SERPINB12Q96P63 405 aa13.18□□□□□ -0.3
CNOT4-204ENST00000414802 OMDQ99983 421 aa13.18□□□□□ -0.3
CNOT4-204ENST00000414802 PCDH12Q9NPG4 1184 aa13.18□□□□□ -0.3
CNOT4-204ENST00000414802 CASS4Q9NQ75 786 aa13.18□□□□□ -0.3
CNOT4-204ENST00000414802 GDF3Q9NR23 364 aa13.18□□□□□ -0.3
CNOT4-204ENST00000414802 FAM114A2Q9NRY5 505 aa13.18□□□□□ -0.3
CNOT4-204ENST00000414802 FBXL12Q9NXK8 326 aa13.18□□□□□ -0.3
CNOT4-204ENST00000414802 DKK3Q9UBP4 350 aa13.18□□□□□ -0.3
CNOT4-204ENST00000414802 FANCMQ8IYD8 2048 aa13.18□□□□□ -0.3
CNOT4-204ENST00000414802 A0A0J9YYE9 177 aa13.18□□□□□ -0.3
CNOT4-204ENST00000414802 NPIPB15A6NHN6 443 aaPredicted RBP13.18□□□□□ -0.3
CNOT4-204ENST00000414802 K7ESF4 209 aa13.18□□□□□ -0.3
CNOT4-204ENST00000414802 ALDH1A2O94788 518 aa13.18□□□□□ -0.3
CNOT4-204ENST00000414802 APBB3O95704 486 aa13.18□□□□□ -0.3
CNOT4-204ENST00000414802 TRBC1P01850 177 aa13.18□□□□□ -0.3
CNOT4-204ENST00000414802 MGAT1P26572 445 aa13.18□□□□□ -0.3
CNOT4-204ENST00000414802 GRIA4P48058 902 aa13.18□□□□□ -0.3
CNOT4-204ENST00000414802 CRADDP78560 199 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms