RNA–Protein interactions for RNA: ENST00000413899.1

HMGB1P11-201, Transcript of high mobility group box 1 pseudogene 11, humanhuman

BASIC

Gene HMGB1P11, Length 637 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P11-201ENST00000413899 CD58P19256 250 aa3.93□□□□□ -1.78
HMGB1P11-201ENST00000413899 GPTP24298 496 aa3.93□□□□□ -1.78
HMGB1P11-201ENST00000413899 SHMT1P34896 483 aa3.93□□□□□ -1.78
HMGB1P11-201ENST00000413899 CBSP35520 551 aa3.93□□□□□ -1.78
HMGB1P11-201ENST00000413899 BSGP35613 385 aa3.93□□□□□ -1.78
HMGB1P11-201ENST00000413899 MLH1P40692 756 aa3.93□□□□□ -1.78
HMGB1P11-201ENST00000413899 HARS2P49590 506 aaKnown RBP3.93□□□□□ -1.78
HMGB1P11-201ENST00000413899 CTCFP49711 727 aaPredicted RBP3.93□□□□□ -1.78
HMGB1P11-201ENST00000413899 RPL7AP62424 266 aaKnown RBP3.93□□□□□ -1.78
HMGB1P11-201ENST00000413899 EGR4Q05215 589 aa3.93□□□□□ -1.78
HMGB1P11-201ENST00000413899 CRYZQ08257 329 aaKnown RBP3.93□□□□□ -1.78
HMGB1P11-201ENST00000413899 GRIK3Q13003 919 aa3.93□□□□□ -1.78
HMGB1P11-201ENST00000413899 ARHGEF6Q15052 776 aa3.93□□□□□ -1.78
HMGB1P11-201ENST00000413899 PPP2R5BQ15173 497 aa3.93□□□□□ -1.78
HMGB1P11-201ENST00000413899 TDRD12Q587J7 1177 aaKnown RBP3.93□□□□□ -1.78
HMGB1P11-201ENST00000413899 PLEKHA7Q6IQ23 1121 aa3.93□□□□□ -1.78
HMGB1P11-201ENST00000413899 LRRC8EQ6NSJ5 796 aa3.93□□□□□ -1.78
HMGB1P11-201ENST00000413899 CES5AQ6NT32 575 aa3.93□□□□□ -1.78
HMGB1P11-201ENST00000413899 CDC73Q6P1J9 531 aa3.93□□□□□ -1.78
HMGB1P11-201ENST00000413899 PDXDC1Q6P996 788 aa3.93□□□□□ -1.78
HMGB1P11-201ENST00000413899 TMTC3Q6ZXV5 915 aa3.93□□□□□ -1.78
HMGB1P11-201ENST00000413899 LINGO2Q7L985 606 aa3.93□□□□□ -1.78
HMGB1P11-201ENST00000413899 DIS3L2Q8IYB7 885 aaKnown RBP3.93□□□□□ -1.78
HMGB1P11-201ENST00000413899 CCDC105Q8IYK2 499 aa3.93□□□□□ -1.78
HMGB1P11-201ENST00000413899 AADATQ8N5Z0 425 aa3.93□□□□□ -1.78
HMGB1P11-201ENST00000413899 NEXN-AS1Q8NBZ9 246 aa3.93□□□□□ -1.78
HMGB1P11-201ENST00000413899 TDRD7Q8NHU6 1098 aaKnown RBP3.93□□□□□ -1.78
HMGB1P11-201ENST00000413899 ADAMTS14Q8WXS8 1223 aa3.93□□□□□ -1.78
HMGB1P11-201ENST00000413899 MIB2Q96AX9 1013 aa3.93□□□□□ -1.78
HMGB1P11-201ENST00000413899 LYZL4Q96KX0 146 aa3.93□□□□□ -1.78
HMGB1P11-201ENST00000413899 SLITRK1Q96PX8 696 aa3.93□□□□□ -1.78
HMGB1P11-201ENST00000413899 WACQ9BTA9 647 aa3.93□□□□□ -1.78
HMGB1P11-201ENST00000413899 NUF2Q9BZD4 464 aa3.93□□□□□ -1.78
HMGB1P11-201ENST00000413899 MAF1Q9H063 256 aa3.93□□□□□ -1.78
HMGB1P11-201ENST00000413899 PDCL3Q9H2J4 239 aa3.93□□□□□ -1.78
HMGB1P11-201ENST00000413899 RANBP17Q9H2T7 1088 aaKnown RBP3.93□□□□□ -1.78
HMGB1P11-201ENST00000413899 WDR26Q9H7D7 661 aa3.93□□□□□ -1.78
HMGB1P11-201ENST00000413899 PRKRIP1Q9H875 184 aaPredicted RBP3.93□□□□□ -1.78
HMGB1P11-201ENST00000413899 IRAK4Q9NWZ3 460 aa3.93□□□□□ -1.78
HMGB1P11-201ENST00000413899 CTNNAL1Q9UBT7 734 aa3.93□□□□□ -1.78
HMGB1P11-201ENST00000413899 AGO1Q9UL18 857 aaKnown RBP3.93□□□□□ -1.78
HMGB1P11-201ENST00000413899 LSM4Q9Y4Z0 139 aaKnown RBP3.93□□□□□ -1.78
HMGB1P11-201ENST00000413899 A0A087X0M5 115 aa3.92□□□□□ -1.78
HMGB1P11-201ENST00000413899 A0A1B0GX30 115 aa3.92□□□□□ -1.78
HMGB1P11-201ENST00000413899 A0A1W2PRG0 241 aa3.92□□□□□ -1.78
HMGB1P11-201ENST00000413899 LRRC53A6NM62 1247 aa3.92□□□□□ -1.78
HMGB1P11-201ENST00000413899 IFNL4K9M1U5 179 aa3.92□□□□□ -1.78
HMGB1P11-201ENST00000413899 SEC14L5O43304 696 aa3.92□□□□□ -1.78
HMGB1P11-201ENST00000413899 SMAD6O43541 496 aaKnown RBP3.92□□□□□ -1.78
HMGB1P11-201ENST00000413899 RGS11O94810 467 aa3.92□□□□□ -1.78
HMGB1P11-201ENST00000413899 VNN2O95498 520 aa3.92□□□□□ -1.78
HMGB1P11-201ENST00000413899 GLUD1P00367 558 aa3.92□□□□□ -1.78
HMGB1P11-201ENST00000413899 CDAP32320 146 aa3.92□□□□□ -1.78
HMGB1P11-201ENST00000413899 MAN1A1P33908 653 aa3.92□□□□□ -1.78
HMGB1P11-201ENST00000413899 GLUD2P49448 558 aa3.92□□□□□ -1.78
HMGB1P11-201ENST00000413899 THBS3P49746 956 aa3.92□□□□□ -1.78
HMGB1P11-201ENST00000413899 MXI1P50539 228 aa3.92□□□□□ -1.78
HMGB1P11-201ENST00000413899 TRAF2Q12933 501 aa3.92□□□□□ -1.78
HMGB1P11-201ENST00000413899 CCNG2Q16589 344 aa3.92□□□□□ -1.78
HMGB1P11-201ENST00000413899 SLC4A8Q2Y0W8 1093 aa3.92□□□□□ -1.78
HMGB1P11-201ENST00000413899 SGO1Q5FBB7 561 aa3.92□□□□□ -1.78
HMGB1P11-201ENST00000413899 FAAH2Q6GMR7 532 aa3.92□□□□□ -1.78
HMGB1P11-201ENST00000413899 KLHL24Q6TFL4 600 aa3.92□□□□□ -1.78
HMGB1P11-201ENST00000413899 NEK10Q6ZWH5 1172 aa3.92□□□□□ -1.78
HMGB1P11-201ENST00000413899 NOXA1Q86UR1 476 aa3.92□□□□□ -1.78
HMGB1P11-201ENST00000413899 SAMD14Q8IZD0 417 aaPredicted RBP3.92□□□□□ -1.78
HMGB1P11-201ENST00000413899 C9orf106Q8NAJ2 232 aa3.92□□□□□ -1.78
HMGB1P11-201ENST00000413899 MIGA1Q8NAN2 632 aa3.92□□□□□ -1.78
HMGB1P11-201ENST00000413899 PPHLN1Q8NEY8 458 aaKnown RBP3.92□□□□□ -1.78
HMGB1P11-201ENST00000413899 BEST2Q8NFU1 509 aa3.92□□□□□ -1.78
HMGB1P11-201ENST00000413899 ETNPPLQ8TBG4 499 aa3.92□□□□□ -1.78
HMGB1P11-201ENST00000413899 ARRDC2Q8TBH0 407 aa3.92□□□□□ -1.78
HMGB1P11-201ENST00000413899 FAM216AQ8WUB2 273 aa3.92□□□□□ -1.78
HMGB1P11-201ENST00000413899 HDAC2Q92769 488 aaKnown RBP3.92□□□□□ -1.78
HMGB1P11-201ENST00000413899 PHF21BQ96EK2 531 aa3.92□□□□□ -1.78
HMGB1P11-201ENST00000413899 PIP5K1AQ99755 562 aa3.92□□□□□ -1.78
HMGB1P11-201ENST00000413899 MMTAG2Q9BU76 263 aaKnown RBP3.92□□□□□ -1.78
HMGB1P11-201ENST00000413899 STRA6Q9BX79 667 aa3.92□□□□□ -1.78
HMGB1P11-201ENST00000413899 MAGEE1Q9HCI5 957 aa3.92□□□□□ -1.78
HMGB1P11-201ENST00000413899 DDX4Q9NQI0 724 aaKnown RBP3.92□□□□□ -1.78
HMGB1P11-201ENST00000413899 ASAH2Q9NR71 780 aa3.92□□□□□ -1.78
HMGB1P11-201ENST00000413899 OR6C3Q9NZP0 311 aa3.92□□□□□ -1.78
HMGB1P11-201ENST00000413899 WNT16Q9UBV4 365 aa3.92□□□□□ -1.78
HMGB1P11-201ENST00000413899 INTS6Q9UL03 887 aaKnown RBP3.92□□□□□ -1.78
HMGB1P11-201ENST00000413899 CAPN7Q9Y6W3 813 aa3.92□□□□□ -1.78
HMGB1P11-201ENST00000413899 TIMM23O14925 209 aa3.91□□□□□ -1.78
HMGB1P11-201ENST00000413899 SH3BP5O60239 455 aa3.91□□□□□ -1.78
HMGB1P11-201ENST00000413899 PAGE4O60829 102 aa3.91□□□□□ -1.78
HMGB1P11-201ENST00000413899 SEC31AO94979 1220 aaKnown RBP3.91□□□□□ -1.78
HMGB1P11-201ENST00000413899 HSPA1AP0DMV8 641 aaKnown RBP3.91□□□□□ -1.78
HMGB1P11-201ENST00000413899 HSPA1BP0DMV9 641 aaKnown RBP3.91□□□□□ -1.78
HMGB1P11-201ENST00000413899 SNHG28P0DPA3 235 aa3.91□□□□□ -1.78
HMGB1P11-201ENST00000413899 TNFAIP3P21580 790 aa3.91□□□□□ -1.78
HMGB1P11-201ENST00000413899 CHMP24386 653 aa3.91□□□□□ -1.78
HMGB1P11-201ENST00000413899 ICAM3P32942 547 aa3.91□□□□□ -1.78
HMGB1P11-201ENST00000413899 RGS2P41220 211 aa3.91□□□□□ -1.78
HMGB1P11-201ENST00000413899 COMPP49747 757 aaPredicted RBP3.91□□□□□ -1.78
HMGB1P11-201ENST00000413899 GNAQP50148 359 aa3.91□□□□□ -1.78
HMGB1P11-201ENST00000413899 HTR6P50406 440 aa3.91□□□□□ -1.78
HMGB1P11-201ENST00000413899 RAD23BP54727 409 aa3.91□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms