RNA–Protein interactions for RNA: ENST00000413578.5

LIMS2-210, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 3

Gene LIMS2, Length 930 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-210ENST00000413578 RTL3Q8N8U3 475 aaKnown RBP12.27□□□□□ -0.45
LIMS2-210ENST00000413578 GPT2Q8TD30 523 aa12.27□□□□□ -0.45
LIMS2-210ENST00000413578 SLC20A1Q8WUM9 679 aa12.27□□□□□ -0.45
LIMS2-210ENST00000413578 PDXPQ96GD0 296 aa12.27□□□□□ -0.45
LIMS2-210ENST00000413578 SEMA3CQ99985 751 aa12.27□□□□□ -0.45
LIMS2-210ENST00000413578 TUBGCP2Q9BSJ2 902 aa12.27□□□□□ -0.45
LIMS2-210ENST00000413578 APOOQ9BUR5 198 aa12.27□□□□□ -0.45
LIMS2-210ENST00000413578 STK33Q9BYT3 514 aa12.27□□□□□ -0.45
LIMS2-210ENST00000413578 STRADBQ9C0K7 418 aa12.27□□□□□ -0.45
LIMS2-210ENST00000413578 OR1A2Q9Y585 309 aa12.27□□□□□ -0.45
LIMS2-210ENST00000413578 DGKBQ9Y6T7 804 aa12.27□□□□□ -0.45
LIMS2-210ENST00000413578 WASH4PA8MWX3 477 aa12.26□□□□□ -0.45
LIMS2-210ENST00000413578 PIGNO95427 931 aa12.26□□□□□ -0.45
LIMS2-210ENST00000413578 CHRNB2P17787 502 aa12.26□□□□□ -0.45
LIMS2-210ENST00000413578 WT1P19544 449 aaPredicted RBP12.26□□□□□ -0.45
LIMS2-210ENST00000413578 ITIH1P19827 911 aa12.26□□□□□ -0.45
LIMS2-210ENST00000413578 HTR1BP28222 390 aa12.26□□□□□ -0.45
LIMS2-210ENST00000413578 MMP12P39900 470 aa12.26□□□□□ -0.45
LIMS2-210ENST00000413578 ETV5P41161 510 aa12.26□□□□□ -0.45
LIMS2-210ENST00000413578 KIAA1024LP59773 190 aa12.26□□□□□ -0.45
LIMS2-210ENST00000413578 FMO1Q01740 532 aa12.26□□□□□ -0.45
LIMS2-210ENST00000413578 MTM1Q13496 603 aa12.26□□□□□ -0.45
LIMS2-210ENST00000413578 SERINC3Q13530 473 aa12.26□□□□□ -0.45
LIMS2-210ENST00000413578 CYTH1Q15438 398 aa12.26□□□□□ -0.45
LIMS2-210ENST00000413578 TCEA2Q15560 299 aa12.26□□□□□ -0.45
LIMS2-210ENST00000413578 UGP2Q16851 508 aa12.26□□□□□ -0.45
LIMS2-210ENST00000413578 CERCAMQ5T4B2 595 aa12.26□□□□□ -0.45
LIMS2-210ENST00000413578 USP53Q70EK8 1073 aa12.26□□□□□ -0.45
LIMS2-210ENST00000413578 SPRED1Q7Z699 444 aa12.26□□□□□ -0.45
LIMS2-210ENST00000413578 ZSWIM9Q86XI8 627 aa12.26□□□□□ -0.45
LIMS2-210ENST00000413578 JAMLQ86YT9 394 aa12.26□□□□□ -0.45
LIMS2-210ENST00000413578 CCNJLQ8IV13 435 aa12.26□□□□□ -0.45
LIMS2-210ENST00000413578 SFTPA2Q8IWL1 248 aa12.26□□□□□ -0.45
LIMS2-210ENST00000413578 PYROXD2Q8N2H3 581 aa12.26□□□□□ -0.45
LIMS2-210ENST00000413578 MLKLQ8NB16 471 aa12.26□□□□□ -0.45
LIMS2-210ENST00000413578 TMEM159Q96B96 161 aa12.26□□□□□ -0.45
LIMS2-210ENST00000413578 HMCESQ96FZ2 354 aa12.26□□□□□ -0.45
LIMS2-210ENST00000413578 WDR92Q96MX6 357 aa12.26□□□□□ -0.45
LIMS2-210ENST00000413578 TRIM4Q9C037 500 aa12.26□□□□□ -0.45
LIMS2-210ENST00000413578 PDFQ9HBH1 243 aa12.26□□□□□ -0.45
LIMS2-210ENST00000413578 PCDH12Q9NPG4 1184 aa12.26□□□□□ -0.45
LIMS2-210ENST00000413578 FOXJ2Q9P0K8 574 aa12.26□□□□□ -0.45
LIMS2-210ENST00000413578 KLQ9UEF7 1012 aa12.26□□□□□ -0.45
LIMS2-210ENST00000413578 PISDQ9UG56 409 aa12.26□□□□□ -0.45
LIMS2-210ENST00000413578 DOLKQ9UPQ8 538 aa12.26□□□□□ -0.45
LIMS2-210ENST00000413578 PCDHGA4Q9Y5G9 962 aa12.26□□□□□ -0.45
LIMS2-210ENST00000413578 PRAMEF33A0A0G2JMD5 474 aa12.25□□□□□ -0.45
LIMS2-210ENST00000413578 C9orf172C9J069 976 aa12.25□□□□□ -0.45
LIMS2-210ENST00000413578 IQCJ-SCHIP1C9J366 451 aaPredicted RBP12.25□□□□□ -0.45
LIMS2-210ENST00000413578 RASA4BC9J798 803 aa12.25□□□□□ -0.45
LIMS2-210ENST00000413578 RASA4O43374 803 aa12.25□□□□□ -0.45
LIMS2-210ENST00000413578 SUV39H1O43463 412 aa12.25□□□□□ -0.45
LIMS2-210ENST00000413578 BUB1BO60566 1050 aaPredicted RBP12.25□□□□□ -0.45
LIMS2-210ENST00000413578 PRAMEF10O60809 474 aa12.25□□□□□ -0.45
LIMS2-210ENST00000413578 CTSEP14091 401 aa12.25□□□□□ -0.45
LIMS2-210ENST00000413578 PRKCSHP14314 528 aaPredicted RBP12.25□□□□□ -0.45
LIMS2-210ENST00000413578 GLB1P16278 677 aa12.25□□□□□ -0.45
LIMS2-210ENST00000413578 YBEYP58557 167 aaPredicted RBP12.25□□□□□ -0.45
LIMS2-210ENST00000413578 CDR2Q01850 454 aa12.25□□□□□ -0.45
LIMS2-210ENST00000413578 SRSF1Q07955 248 aaKnown RBP eCLIP12.25□□□□□ -0.45
LIMS2-210ENST00000413578 HLTFQ14527 1009 aaKnown RBP eCLIP12.25□□□□□ -0.45
LIMS2-210ENST00000413578 CAMK4Q16566 473 aa12.25□□□□□ -0.45
LIMS2-210ENST00000413578 BRAT1Q6PJG6 821 aa12.25□□□□□ -0.45
LIMS2-210ENST00000413578 UMODL1-AS1Q8N2C9 162 aa12.25□□□□□ -0.45
LIMS2-210ENST00000413578 PLA2G15Q8NCC3 412 aa12.25□□□□□ -0.45
LIMS2-210ENST00000413578 FAM172AQ8WUF8 416 aa12.25□□□□□ -0.45
LIMS2-210ENST00000413578 HTR3CQ8WXA8 447 aa12.25□□□□□ -0.45
LIMS2-210ENST00000413578 OR1E3Q8WZA6 343 aa12.25□□□□□ -0.45
LIMS2-210ENST00000413578 FUBP1Q96AE4 644 aaKnown RBP12.25□□□□□ -0.45
LIMS2-210ENST00000413578 C11orf70Q9BRQ4 267 aa12.25□□□□□ -0.45
LIMS2-210ENST00000413578 FAM117AQ9C073 453 aa12.25□□□□□ -0.45
LIMS2-210ENST00000413578 B3GNT4Q9C0J1 378 aa12.25□□□□□ -0.45
LIMS2-210ENST00000413578 GANQ9H2C0 597 aa12.25□□□□□ -0.45
LIMS2-210ENST00000413578 SUV39H2Q9H5I1 410 aa12.25□□□□□ -0.45
LIMS2-210ENST00000413578 FGF22Q9HCT0 170 aa12.25□□□□□ -0.45
LIMS2-210ENST00000413578 HEMK1Q9Y5R4 338 aaPredicted RBP12.25□□□□□ -0.45
LIMS2-210ENST00000413578 NBPF19A0A087WUL8 3843 aa12.25□□□□□ -0.45
LIMS2-210ENST00000413578 A0A1W2PQC6 194 aa12.24□□□□□ -0.45
LIMS2-210ENST00000413578 TCRBV5S1A1TA0A578 114 aa12.24□□□□□ -0.45
LIMS2-210ENST00000413578 CFAP69A5D8W1 941 aa12.24□□□□□ -0.45
LIMS2-210ENST00000413578 TMEM202A6NGA9 273 aa12.24□□□□□ -0.45
LIMS2-210ENST00000413578 TNFP01375 233 aa12.24□□□□□ -0.45
LIMS2-210ENST00000413578 PCCBP05166 539 aa12.24□□□□□ -0.45
LIMS2-210ENST00000413578 HOXC4P09017 264 aaPredicted RBP12.24□□□□□ -0.45
LIMS2-210ENST00000413578 FAM87AP0C7U9 286 aa12.24□□□□□ -0.45
LIMS2-210ENST00000413578 JMJD7P0C870 316 aa12.24□□□□□ -0.45
LIMS2-210ENST00000413578 UNGP13051 313 aaPredicted RBP12.24□□□□□ -0.45
LIMS2-210ENST00000413578 GM2AP17900 193 aa12.24□□□□□ -0.45
LIMS2-210ENST00000413578 CD82P27701 267 aa12.24□□□□□ -0.45
LIMS2-210ENST00000413578 EPHB2P29323 1055 aa12.24□□□□□ -0.45
LIMS2-210ENST00000413578 RFC1P35251 1148 aaPredicted RBP12.24□□□□□ -0.45
LIMS2-210ENST00000413578 TRIM23P36406 574 aa12.24□□□□□ -0.45
LIMS2-210ENST00000413578 LIG3P49916 1009 aa12.24□□□□□ -0.45
LIMS2-210ENST00000413578 NFKB2Q00653 900 aa12.24□□□□□ -0.45
LIMS2-210ENST00000413578 B4GALNT1Q00973 533 aa12.24□□□□□ -0.45
LIMS2-210ENST00000413578 RALGDSQ12967 914 aa12.24□□□□□ -0.45
LIMS2-210ENST00000413578 GRM3Q14832 879 aa12.24□□□□□ -0.45
LIMS2-210ENST00000413578 TBR1Q16650 682 aa12.24□□□□□ -0.45
LIMS2-210ENST00000413578 PARP15Q460N3 678 aa12.24□□□□□ -0.45
LIMS2-210ENST00000413578 WDR59Q6PJI9 974 aa12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms