RNA–Protein interactions for RNA: ENST00000413374.1

NCKIPSD-202, Transcript of NCK interacting protein with SH3 domain, humanhuman

TSL 3

Gene NCKIPSD, Length 725 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-202ENST00000413374 TRAFD1O14545 582 aaPredicted RBP10.24□□□□□ -0.77
NCKIPSD-202ENST00000413374 RFPL3O75679 317 aa10.24□□□□□ -0.77
NCKIPSD-202ENST00000413374 CSF2P04141 144 aa10.24□□□□□ -0.77
NCKIPSD-202ENST00000413374 KRT7P08729 469 aa10.24□□□□□ -0.77
NCKIPSD-202ENST00000413374 GIMD1P0DJR0 217 aa10.24□□□□□ -0.77
NCKIPSD-202ENST00000413374 JUPP14923 745 aa10.24□□□□□ -0.77
NCKIPSD-202ENST00000413374 CTPS1P17812 591 aa10.24□□□□□ -0.77
NCKIPSD-202ENST00000413374 MAGEA1P43355 309 aa10.24□□□□□ -0.77
NCKIPSD-202ENST00000413374 NOP2P46087 812 aaKnown RBP10.24□□□□□ -0.77
NCKIPSD-202ENST00000413374 ACADVLP49748 655 aa10.24□□□□□ -0.77
NCKIPSD-202ENST00000413374 SUOXP51687 545 aa10.24□□□□□ -0.77
NCKIPSD-202ENST00000413374 AP1S1P61966 158 aa10.24□□□□□ -0.77
NCKIPSD-202ENST00000413374 HNRNPKP61978 463 aaKnown RBP eCLIP10.24□□□□□ -0.77
NCKIPSD-202ENST00000413374 POLR2LP62875 67 aaKnown RBP10.24□□□□□ -0.77
NCKIPSD-202ENST00000413374 GBE1Q04446 702 aa10.24□□□□□ -0.77
NCKIPSD-202ENST00000413374 SLC10A2Q12908 348 aaPredicted RBP10.24□□□□□ -0.77
NCKIPSD-202ENST00000413374 TRAF2Q12933 501 aa10.24□□□□□ -0.77
NCKIPSD-202ENST00000413374 INPP5AQ14642 412 aa10.24□□□□□ -0.77
NCKIPSD-202ENST00000413374 ACOX1Q15067 660 aa10.24□□□□□ -0.77
NCKIPSD-202ENST00000413374 PAFAH1B3Q15102 231 aaKnown RBP10.24□□□□□ -0.77
NCKIPSD-202ENST00000413374 PDK2Q15119 407 aa10.24□□□□□ -0.77
NCKIPSD-202ENST00000413374 LLGL1Q15334 1064 aa10.24□□□□□ -0.77
NCKIPSD-202ENST00000413374 DEFB133Q30KQ1 61 aa10.24□□□□□ -0.77
NCKIPSD-202ENST00000413374 ENPP7Q6UWV6 458 aa10.24□□□□□ -0.77
NCKIPSD-202ENST00000413374 ZSCAN30Q86W11 494 aa10.24□□□□□ -0.77
NCKIPSD-202ENST00000413374 PARGQ86W56 976 aa10.24□□□□□ -0.77
NCKIPSD-202ENST00000413374 MAP7D3Q8IWC1 876 aa10.24□□□□□ -0.77
NCKIPSD-202ENST00000413374 BBS5Q8N3I7 341 aa10.24□□□□□ -0.77
NCKIPSD-202ENST00000413374 PQLC3Q8N755 202 aa10.24□□□□□ -0.77
NCKIPSD-202ENST00000413374 TC2NQ8N9U0 490 aa10.24□□□□□ -0.77
NCKIPSD-202ENST00000413374 PLA2G15Q8NCC3 412 aa10.24□□□□□ -0.77
NCKIPSD-202ENST00000413374 CCNYQ8ND76 341 aa10.24□□□□□ -0.77
NCKIPSD-202ENST00000413374 DENND6BQ8NEG7 585 aa10.24□□□□□ -0.77
NCKIPSD-202ENST00000413374 FAM174AQ8TBP5 190 aa10.24□□□□□ -0.77
NCKIPSD-202ENST00000413374 FAM71BQ8TC56 605 aa10.24□□□□□ -0.77
NCKIPSD-202ENST00000413374 ZCCHC14Q8WYQ9 949 aaKnown RBP10.24□□□□□ -0.77
NCKIPSD-202ENST00000413374 TSACCQ96A04 125 aaPredicted RBP10.24□□□□□ -0.77
NCKIPSD-202ENST00000413374 ECHDC3Q96DC8 303 aa10.24□□□□□ -0.77
NCKIPSD-202ENST00000413374 SMIM14Q96QK8 99 aa10.24□□□□□ -0.77
NCKIPSD-202ENST00000413374 NUDCD1Q96RS6 583 aa10.24□□□□□ -0.77
NCKIPSD-202ENST00000413374 APOOQ9BUR5 198 aa10.24□□□□□ -0.77
NCKIPSD-202ENST00000413374 C1QTNF7Q9BXJ2 289 aa10.24□□□□□ -0.77
NCKIPSD-202ENST00000413374 RBM22Q9NW64 420 aaKnown RBP eCLIP10.24□□□□□ -0.77
NCKIPSD-202ENST00000413374 RCOR3Q9P2K3 495 aaPredicted RBP10.24□□□□□ -0.77
NCKIPSD-202ENST00000413374 B4GALT6Q9UBX8 382 aa10.24□□□□□ -0.77
NCKIPSD-202ENST00000413374 OR1A2Q9Y585 309 aa10.24□□□□□ -0.77
NCKIPSD-202ENST00000413374 CACNA1EQ15878 2313 aa10.24□□□□□ -0.77
NCKIPSD-202ENST00000413374 DOCK4Q8N1I0 1966 aa10.23□□□□□ -0.77
NCKIPSD-202ENST00000413374 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP10.23□□□□□ -0.77
NCKIPSD-202ENST00000413374 H3BM21 787 aa10.23□□□□□ -0.77
NCKIPSD-202ENST00000413374 K7ESM1 405 aa10.23□□□□□ -0.77
NCKIPSD-202ENST00000413374 RECQL5O94762 991 aaPredicted RBP10.23□□□□□ -0.77
NCKIPSD-202ENST00000413374 DKK1O94907 266 aa10.23□□□□□ -0.77
NCKIPSD-202ENST00000413374 CPP00450 1065 aa10.23□□□□□ -0.77
NCKIPSD-202ENST00000413374 ELFN1P0C7U0 828 aa10.23□□□□□ -0.77
NCKIPSD-202ENST00000413374 CR2P20023 1033 aa10.23□□□□□ -0.77
NCKIPSD-202ENST00000413374 MMP12P39900 470 aa10.23□□□□□ -0.77
NCKIPSD-202ENST00000413374 GARSP41250 739 aaKnown RBP10.23□□□□□ -0.77
NCKIPSD-202ENST00000413374 ZNF75DP51815 510 aa10.23□□□□□ -0.77
NCKIPSD-202ENST00000413374 DSC2Q02487 901 aa10.23□□□□□ -0.77
NCKIPSD-202ENST00000413374 GALNT2Q10471 571 aa10.23□□□□□ -0.77
NCKIPSD-202ENST00000413374 RALGDSQ12967 914 aa10.23□□□□□ -0.77
NCKIPSD-202ENST00000413374 ZNF211Q13398 564 aaPredicted RBP10.23□□□□□ -0.77
NCKIPSD-202ENST00000413374 PTK2BQ14289 1009 aa10.23□□□□□ -0.77
NCKIPSD-202ENST00000413374 PROX2Q3B8N5 592 aa10.23□□□□□ -0.77
NCKIPSD-202ENST00000413374 PRRT3Q5FWE3 981 aa10.23□□□□□ -0.77
NCKIPSD-202ENST00000413374 SARM1Q6SZW1 724 aa10.23□□□□□ -0.77
NCKIPSD-202ENST00000413374 NPNTQ6UXI9 565 aa10.23□□□□□ -0.77
NCKIPSD-202ENST00000413374 LIPIQ6XZB0 460 aa10.23□□□□□ -0.77
NCKIPSD-202ENST00000413374 GAS2L3Q86XJ1 694 aa10.23□□□□□ -0.77
NCKIPSD-202ENST00000413374 HID1Q8IV36 788 aa10.23□□□□□ -0.77
NCKIPSD-202ENST00000413374 RHOT2Q8IXI1 618 aa10.23□□□□□ -0.77
NCKIPSD-202ENST00000413374 PHACTR4Q8IZ21 702 aa10.23□□□□□ -0.77
NCKIPSD-202ENST00000413374 ZNF548Q8NEK5 533 aaPredicted RBP10.23□□□□□ -0.77
NCKIPSD-202ENST00000413374 OR4C6Q8NH72 309 aa10.23□□□□□ -0.77
NCKIPSD-202ENST00000413374 MDM1Q8TC05 714 aa10.23□□□□□ -0.77
NCKIPSD-202ENST00000413374 APOLD1Q96LR9 279 aa10.23□□□□□ -0.77
NCKIPSD-202ENST00000413374 RNF157Q96PX1 679 aa10.23□□□□□ -0.77
NCKIPSD-202ENST00000413374 SEMA3CQ99985 751 aa10.23□□□□□ -0.77
NCKIPSD-202ENST00000413374 MGME1Q9BQP7 344 aa10.23□□□□□ -0.77
NCKIPSD-202ENST00000413374 ZNF670Q9BS34 389 aa10.23□□□□□ -0.77
NCKIPSD-202ENST00000413374 MAK16Q9BXY0 300 aaKnown RBP10.23□□□□□ -0.77
NCKIPSD-202ENST00000413374 GOLPH3Q9H4A6 298 aa10.23□□□□□ -0.77
NCKIPSD-202ENST00000413374 GPR27Q9NS67 375 aa10.23□□□□□ -0.77
NCKIPSD-202ENST00000413374 HEY1Q9Y5J3 304 aa10.23□□□□□ -0.77
NCKIPSD-202ENST00000413374 RAI2Q9Y5P3 530 aa10.23□□□□□ -0.77
NCKIPSD-202ENST00000413374 CPED1A4D0V7 1026 aa10.22□□□□□ -0.77
NCKIPSD-202ENST00000413374 TRABD2BA6NFA1 517 aa10.22□□□□□ -0.77
NCKIPSD-202ENST00000413374 NEMP2A6NFY4 417 aa10.22□□□□□ -0.77
NCKIPSD-202ENST00000413374 MATN3O15232 486 aa10.22□□□□□ -0.77
NCKIPSD-202ENST00000413374 AQP9O43315 295 aa10.22□□□□□ -0.77
NCKIPSD-202ENST00000413374 GCATO75600 419 aa10.22□□□□□ -0.77
NCKIPSD-202ENST00000413374 JCHAINP01591 159 aa10.22□□□□□ -0.77
NCKIPSD-202ENST00000413374 KRT1P04264 644 aa10.22□□□□□ -0.77
NCKIPSD-202ENST00000413374 CELA2BP08218 269 aaPredicted RBP10.22□□□□□ -0.77
NCKIPSD-202ENST00000413374 PDHA1P08559 390 aa10.22□□□□□ -0.77
NCKIPSD-202ENST00000413374 ALPIP09923 528 aa10.22□□□□□ -0.77
NCKIPSD-202ENST00000413374 ALPPL2P10696 532 aa10.22□□□□□ -0.77
NCKIPSD-202ENST00000413374 NME1P15531 152 aaKnown RBP10.22□□□□□ -0.77
NCKIPSD-202ENST00000413374 COMTP21964 271 aa10.22□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms