RNA–Protein interactions for RNA: ENST00000413186.6

SYNE1-211, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 5 BASIC

Gene SYNE1, Length 4,860 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-211ENST00000413186 ARMC6Q6NXE6 501 aa8.58□□□□□ -1.04
SYNE1-211ENST00000413186 PCDH20Q8N6Y1 951 aaKnown RBP8.58□□□□□ -1.04
SYNE1-211ENST00000413186 GSTCDQ8NEC7 633 aa8.58□□□□□ -1.04
SYNE1-211ENST00000413186 GDPD5Q8WTR4 605 aa8.58□□□□□ -1.04
SYNE1-211ENST00000413186 AZIN2Q96A70 460 aa8.58□□□□□ -1.04
SYNE1-211ENST00000413186 FCRL5Q96RD9 977 aa8.58□□□□□ -1.04
SYNE1-211ENST00000413186 ASB8Q9H765 288 aa8.58□□□□□ -1.04
SYNE1-211ENST00000413186 ZDHHC4Q9NPG8 344 aa8.58□□□□□ -1.04
SYNE1-211ENST00000413186 GDE1Q9NZC3 331 aa8.58□□□□□ -1.04
SYNE1-211ENST00000413186 KIF17Q9P2E2 1029 aa8.58□□□□□ -1.04
SYNE1-211ENST00000413186 COL11A1P12107 1806 aaPredicted RBP8.58□□□□□ -1.04
SYNE1-211ENST00000413186 hCG_2014768A0A024R1R8 64 aa8.58□□□□□ -1.04
SYNE1-211ENST00000413186 H2AFYO75367 372 aaKnown RBP8.58□□□□□ -1.04
SYNE1-211ENST00000413186 RFPL2O75678 378 aa8.58□□□□□ -1.04
SYNE1-211ENST00000413186 HMOX2P30519 316 aa8.58□□□□□ -1.04
SYNE1-211ENST00000413186 AKR1D1P51857 326 aa8.58□□□□□ -1.04
SYNE1-211ENST00000413186 CBX2Q14781 532 aaPredicted RBP8.58□□□□□ -1.04
SYNE1-211ENST00000413186 MAPRE2Q15555 327 aa8.58□□□□□ -1.04
SYNE1-211ENST00000413186 OTOAQ7RTW8 1153 aa8.58□□□□□ -1.04
SYNE1-211ENST00000413186 TAS1R1Q7RTX1 841 aa8.58□□□□□ -1.04
SYNE1-211ENST00000413186 HAUS8Q9BT25 410 aa8.58□□□□□ -1.04
SYNE1-211ENST00000413186 SYT11Q9BT88 431 aa8.58□□□□□ -1.04
SYNE1-211ENST00000413186 POLMQ9NP87 494 aaPredicted RBP8.58□□□□□ -1.04
SYNE1-211ENST00000413186 LNPEPQ9UIQ6 1025 aa8.58□□□□□ -1.04
SYNE1-211ENST00000413186 CHKBQ9Y259 395 aa8.58□□□□□ -1.04
SYNE1-211ENST00000413186 WNT6Q9Y6F9 365 aa8.58□□□□□ -1.04
SYNE1-211ENST00000413186 LOC285556D6RIA3 1793 aa8.58□□□□□ -1.04
SYNE1-211ENST00000413186 F8W810 466 aa8.58□□□□□ -1.04
SYNE1-211ENST00000413186 ELFN1P0C7U0 828 aa8.58□□□□□ -1.04
SYNE1-211ENST00000413186 NRG3P56975 720 aa8.58□□□□□ -1.04
SYNE1-211ENST00000413186 GALNT2Q10471 571 aa8.58□□□□□ -1.04
SYNE1-211ENST00000413186 SHHQ15465 462 aa8.58□□□□□ -1.04
SYNE1-211ENST00000413186 LRRC8EQ6NSJ5 796 aa8.58□□□□□ -1.04
SYNE1-211ENST00000413186 LINGO4Q6UY18 593 aa8.58□□□□□ -1.04
SYNE1-211ENST00000413186 TDHQ8IZJ6 230 aa8.58□□□□□ -1.04
SYNE1-211ENST00000413186 C12orf76Q8N812 135 aaPredicted RBP8.58□□□□□ -1.04
SYNE1-211ENST00000413186 SPPL3Q8TCT6 385 aa8.58□□□□□ -1.04
SYNE1-211ENST00000413186 LINC01599Q8WXQ3 324 aa8.58□□□□□ -1.04
SYNE1-211ENST00000413186 SLCO2A1Q92959 643 aa8.58□□□□□ -1.04
SYNE1-211ENST00000413186 ADAM33Q9BZ11 813 aa8.58□□□□□ -1.04
SYNE1-211ENST00000413186 KDM4CQ9H3R0 1056 aa8.58□□□□□ -1.04
SYNE1-211ENST00000413186 MLXIPLQ9NP71 852 aa8.58□□□□□ -1.04
SYNE1-211ENST00000413186 PIH1D1Q9NWS0 290 aaKnown RBP8.58□□□□□ -1.04
SYNE1-211ENST00000413186 ARHGAP26Q9UNA1 814 aa8.58□□□□□ -1.04
SYNE1-211ENST00000413186 USP3Q9Y6I4 520 aa8.58□□□□□ -1.04
SYNE1-211ENST00000413186 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP8.57□□□□□ -1.04
SYNE1-211ENST00000413186 SOBPA7XYQ1 873 aa8.57□□□□□ -1.04
SYNE1-211ENST00000413186 STMND1H3BQB6 276 aa8.57□□□□□ -1.04
SYNE1-211ENST00000413186 RPN2P04844 631 aa8.57□□□□□ -1.04
SYNE1-211ENST00000413186 EPCAMP16422 314 aa8.57□□□□□ -1.04
SYNE1-211ENST00000413186 KELP23276 732 aa8.57□□□□□ -1.04
SYNE1-211ENST00000413186 CLCN5P51795 746 aa8.57□□□□□ -1.04
SYNE1-211ENST00000413186 OCRLQ01968 901 aa8.57□□□□□ -1.04
SYNE1-211ENST00000413186 RBBP7Q16576 425 aa8.57□□□□□ -1.04
SYNE1-211ENST00000413186 CCDC142Q17RM4 750 aa8.57□□□□□ -1.04
SYNE1-211ENST00000413186 KIAA0319Q5VV43 1072 aa8.57□□□□□ -1.04
SYNE1-211ENST00000413186 TXNRD3NBQ6F5E7 133 aa8.57□□□□□ -1.04
SYNE1-211ENST00000413186 CACUL1Q86Y37 369 aa8.57□□□□□ -1.04
SYNE1-211ENST00000413186 IQCKQ8N0W5 287 aa8.57□□□□□ -1.04
SYNE1-211ENST00000413186 EPS8L3Q8TE67 593 aaKnown RBP8.57□□□□□ -1.04
SYNE1-211ENST00000413186 CD101Q93033 1021 aa8.57□□□□□ -1.04
SYNE1-211ENST00000413186 PIWIL1Q96J94 861 aaKnown RBP8.57□□□□□ -1.04
SYNE1-211ENST00000413186 FEM1CQ96JP0 617 aa8.57□□□□□ -1.04
SYNE1-211ENST00000413186 KLF6Q99612 283 aaPredicted RBP8.57□□□□□ -1.04
SYNE1-211ENST00000413186 ECT2Q9H8V3 914 aa8.57□□□□□ -1.04
SYNE1-211ENST00000413186 ANKRD6Q9Y2G4 727 aa8.57□□□□□ -1.04
SYNE1-211ENST00000413186 C2orf71A6NGG8 1288 aa8.57□□□□□ -1.04
SYNE1-211ENST00000413186 STC2O76061 302 aa8.57□□□□□ -1.04
SYNE1-211ENST00000413186 KLHL2O95198 593 aa8.57□□□□□ -1.04
SYNE1-211ENST00000413186 TYRP14679 529 aa8.57□□□□□ -1.04
SYNE1-211ENST00000413186 AP1S2P56377 157 aa8.57□□□□□ -1.04
SYNE1-211ENST00000413186 DLG2Q15700 870 aa8.57□□□□□ -1.04
SYNE1-211ENST00000413186 DNAL1Q4LDG9 190 aa8.57□□□□□ -1.04
SYNE1-211ENST00000413186 RAB41Q5JT25 222 aa8.57□□□□□ -1.04
SYNE1-211ENST00000413186 LY6G5CQ5SRR4 150 aa8.57□□□□□ -1.04
SYNE1-211ENST00000413186 NETO2Q8NC67 525 aa8.57□□□□□ -1.04
SYNE1-211ENST00000413186 ZMIZ2Q8NF64 920 aa8.57□□□□□ -1.04
SYNE1-211ENST00000413186 NDEL1Q9GZM8 345 aa8.57□□□□□ -1.04
SYNE1-211ENST00000413186 FAM153BP0C7A2 387 aa8.57□□□□□ -1.04
SYNE1-211ENST00000413186 HTR1BP28222 390 aa8.57□□□□□ -1.04
SYNE1-211ENST00000413186 GPR1P46091 355 aa8.57□□□□□ -1.04
SYNE1-211ENST00000413186 DSC2Q02487 901 aa8.57□□□□□ -1.04
SYNE1-211ENST00000413186 ART3Q13508 389 aa8.57□□□□□ -1.04
SYNE1-211ENST00000413186 FAM153CQ494X1 144 aa8.57□□□□□ -1.04
SYNE1-211ENST00000413186 CARD16Q5EG05 197 aa8.57□□□□□ -1.04
SYNE1-211ENST00000413186 PKN3Q6P5Z2 889 aa8.57□□□□□ -1.04
SYNE1-211ENST00000413186 OOSP2Q86WS3 158 aa8.57□□□□□ -1.04
SYNE1-211ENST00000413186 UMODL1-AS1Q8N2C9 162 aa8.57□□□□□ -1.04
SYNE1-211ENST00000413186 TSC22D3Q99576 134 aa8.57□□□□□ -1.04
SYNE1-211ENST00000413186 NMRAL1Q9HBL8 299 aa8.57□□□□□ -1.04
SYNE1-211ENST00000413186 RXFP1Q9HBX9 757 aa8.57□□□□□ -1.04
SYNE1-211ENST00000413186 SPHK2Q9NRA0 654 aa8.57□□□□□ -1.04
SYNE1-211ENST00000413186 WWOXQ9NZC7 414 aa8.57□□□□□ -1.04
SYNE1-211ENST00000413186 RNF112Q9ULX5 631 aa8.57□□□□□ -1.04
SYNE1-211ENST00000413186 DOCK3Q8IZD9 2030 aa8.57□□□□□ -1.04
SYNE1-211ENST00000413186 PKDCCQ504Y2 493 aa8.57□□□□□ -1.04
SYNE1-211ENST00000413186 CERS6Q6ZMG9 384 aa8.57□□□□□ -1.04
SYNE1-211ENST00000413186 PARP9Q8IXQ6 854 aa8.57□□□□□ -1.04
SYNE1-211ENST00000413186 STYXQ8WUJ0 223 aa8.57□□□□□ -1.04
SYNE1-211ENST00000413186 CPT1BQ92523 772 aa8.57□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms