RNA–Protein interactions for RNA: ENST00000412649.5

CLTCL1-201, Transcript of clathrin heavy chain like 1, humanhuman

TSL 2

Gene CLTCL1, Length 4,635 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-201ENST00000412649 NCAM1P13591 858 aa13.97□□□□□ -0.17
CLTCL1-201ENST00000412649 NFKB1P19838 968 aa13.97□□□□□ -0.17
CLTCL1-201ENST00000412649 TCF7P36402 384 aaPredicted RBP13.97□□□□□ -0.17
CLTCL1-201ENST00000412649 ANKDD1AQ495B1 522 aa13.97□□□□□ -0.17
CLTCL1-201ENST00000412649 EFCAB12Q6NXP0 572 aa13.97□□□□□ -0.17
CLTCL1-201ENST00000412649 ARMC8Q8IUR7 673 aa13.97□□□□□ -0.17
CLTCL1-201ENST00000412649 FNDC5Q8NAU1 212 aa13.97□□□□□ -0.17
CLTCL1-201ENST00000412649 ZNF540Q8NDQ6 660 aa13.97□□□□□ -0.17
CLTCL1-201ENST00000412649 HERC2P3Q9BVR0 1158 aa13.97□□□□□ -0.17
CLTCL1-201ENST00000412649 ALG2Q9H553 416 aa13.97□□□□□ -0.17
CLTCL1-201ENST00000412649 SP110Q9HB58 689 aa13.97□□□□□ -0.17
CLTCL1-201ENST00000412649 CACNA2D2Q9NY47 1150 aa13.97□□□□□ -0.17
CLTCL1-201ENST00000412649 ARIH1Q9Y4X5 557 aaPredicted RBP13.97□□□□□ -0.17
CLTCL1-201ENST00000412649 TMEM221A6NGB7 291 aa13.97□□□□□ -0.17
CLTCL1-201ENST00000412649 LACTBL1A8MY62 500 aa13.97□□□□□ -0.17
CLTCL1-201ENST00000412649 DDR2Q16832 855 aa13.97□□□□□ -0.17
CLTCL1-201ENST00000412649 ARHGAP36Q6ZRI8 547 aa13.97□□□□□ -0.17
CLTCL1-201ENST00000412649 ILDR2Q71H61 639 aa13.97□□□□□ -0.17
CLTCL1-201ENST00000412649 SLC7A5P1Q8MH63 180 aa13.97□□□□□ -0.17
CLTCL1-201ENST00000412649 C19orf60Q96EN9 201 aa13.97□□□□□ -0.17
CLTCL1-201ENST00000412649 SPATA33Q96N06 139 aa13.97□□□□□ -0.17
CLTCL1-201ENST00000412649 TMEM39BQ9GZU3 492 aa13.97□□□□□ -0.17
CLTCL1-201ENST00000412649 NUAK2Q9H093 628 aa13.97□□□□□ -0.17
CLTCL1-201ENST00000412649 EIF2B3Q9NR50 452 aaKnown RBP13.97□□□□□ -0.17
CLTCL1-201ENST00000412649 INTS10Q9NVR2 710 aaKnown RBP13.97□□□□□ -0.17
CLTCL1-201ENST00000412649 ERVK-11Q9UQG0 969 aa13.97□□□□□ -0.17
CLTCL1-201ENST00000412649 SPATA31A5Q5VU36 1347 aa13.96□□□□□ -0.17
CLTCL1-201ENST00000412649 SPATA31A7Q8IWB4 1347 aa13.96□□□□□ -0.17
CLTCL1-201ENST00000412649 IPO13O94829 963 aaKnown RBP13.96□□□□□ -0.17
CLTCL1-201ENST00000412649 RHOBTB1O94844 696 aa13.96□□□□□ -0.17
CLTCL1-201ENST00000412649 MSH3P20585 1137 aa13.96□□□□□ -0.17
CLTCL1-201ENST00000412649 LIPEQ05469 1076 aa13.96□□□□□ -0.17
CLTCL1-201ENST00000412649 APOFQ13790 326 aa13.96□□□□□ -0.17
CLTCL1-201ENST00000412649 DUS1LQ6P1R4 473 aaKnown RBP13.96□□□□□ -0.17
CLTCL1-201ENST00000412649 MCRS1Q96EZ8 462 aa13.96□□□□□ -0.17
CLTCL1-201ENST00000412649 PRKD2Q9BZL6 878 aa13.96□□□□□ -0.17
CLTCL1-201ENST00000412649 GDAP2Q9NXN4 497 aa13.96□□□□□ -0.17
CLTCL1-201ENST00000412649 HOXC10Q9NYD6 342 aa13.96□□□□□ -0.17
CLTCL1-201ENST00000412649 TSR3Q9UJK0 312 aaKnown RBP13.96□□□□□ -0.17
CLTCL1-201ENST00000412649 KRBA1A5PL33 1030 aa13.96□□□□□ -0.17
CLTCL1-201ENST00000412649 TMEM233B4DJY2 109 aa13.96□□□□□ -0.17
CLTCL1-201ENST00000412649 SLC22A1O15245 554 aa13.96□□□□□ -0.17
CLTCL1-201ENST00000412649 SYNCRIPO60506 623 aaKnown RBP13.96□□□□□ -0.17
CLTCL1-201ENST00000412649 MOCS2O96007 188 aaPredicted RBP13.96□□□□□ -0.17
CLTCL1-201ENST00000412649 GRM1Q13255 1194 aa13.96□□□□□ -0.17
CLTCL1-201ENST00000412649 CAPSQ13938 189 aa13.96□□□□□ -0.17
CLTCL1-201ENST00000412649 FSCN1Q16658 493 aaKnown RBP13.96□□□□□ -0.17
CLTCL1-201ENST00000412649 ANGPTL8Q6UXH0 198 aa13.96□□□□□ -0.17
CLTCL1-201ENST00000412649 PLD6Q8N2A8 252 aaKnown RBP13.96□□□□□ -0.17
CLTCL1-201ENST00000412649 SLC29A1Q99808 456 aa13.96□□□□□ -0.17
CLTCL1-201ENST00000412649 CHRAC1Q9NRG0 131 aa13.96□□□□□ -0.17
CLTCL1-201ENST00000412649 EHD3Q9NZN3 535 aa13.96□□□□□ -0.17
CLTCL1-201ENST00000412649 MAGEL2Q9UJ55 1249 aa13.96□□□□□ -0.17
CLTCL1-201ENST00000412649 VPS28Q9UK41 221 aa13.96□□□□□ -0.17
CLTCL1-201ENST00000412649 PRSS51A0A1B0GVH4 220 aa13.96□□□□□ -0.18
CLTCL1-201ENST00000412649 ATG7O95352 703 aa13.96□□□□□ -0.18
CLTCL1-201ENST00000412649 ENO2P09104 434 aaPredicted RBP13.96□□□□□ -0.18
CLTCL1-201ENST00000412649 GSTM4Q03013 218 aa13.96□□□□□ -0.18
CLTCL1-201ENST00000412649 CA9Q16790 459 aa13.96□□□□□ -0.18
CLTCL1-201ENST00000412649 RBM48Q5RL73 367 aaKnown RBP13.96□□□□□ -0.18
CLTCL1-201ENST00000412649 DENND5AQ6IQ26 1287 aa13.96□□□□□ -0.18
CLTCL1-201ENST00000412649 COLGALT2Q8IYK4 626 aa13.96□□□□□ -0.18
CLTCL1-201ENST00000412649 EGFL8Q99944 293 aa13.96□□□□□ -0.18
CLTCL1-201ENST00000412649 TBL1YQ9BQ87 522 aa13.96□□□□□ -0.18
CLTCL1-201ENST00000412649 HSFX1Q9UBD0 423 aa13.96□□□□□ -0.18
CLTCL1-201ENST00000412649 POLG2Q9UHN1 485 aa13.96□□□□□ -0.18
CLTCL1-201ENST00000412649 TBX1O43435 398 aa13.95□□□□□ -0.18
CLTCL1-201ENST00000412649 MFSD11O43934 449 aa13.95□□□□□ -0.18
CLTCL1-201ENST00000412649 ZNF682O95780 498 aa13.95□□□□□ -0.18
CLTCL1-201ENST00000412649 NFICP08651 508 aa13.95□□□□□ -0.18
CLTCL1-201ENST00000412649 KCTD2Q14681 263 aa13.95□□□□□ -0.18
CLTCL1-201ENST00000412649 SLC26A9Q7LBE3 791 aa13.95□□□□□ -0.18
CLTCL1-201ENST00000412649 ANKFN1Q8N957 763 aa13.95□□□□□ -0.18
CLTCL1-201ENST00000412649 ZNF280CQ8ND82 737 aa13.95□□□□□ -0.18
CLTCL1-201ENST00000412649 TRPV3Q8NET8 790 aa13.95□□□□□ -0.18
CLTCL1-201ENST00000412649 SKA2Q8WVK7 121 aaPredicted RBP13.95□□□□□ -0.18
CLTCL1-201ENST00000412649 EFHD2Q96C19 240 aaPredicted RBP13.95□□□□□ -0.18
CLTCL1-201ENST00000412649 CELF6Q96J87 481 aaKnown RBP13.95□□□□□ -0.18
CLTCL1-201ENST00000412649 SORT1Q99523 831 aa13.95□□□□□ -0.18
CLTCL1-201ENST00000412649 ROGDIQ9GZN7 287 aa13.95□□□□□ -0.18
CLTCL1-201ENST00000412649 MAGEE1Q9HCI5 957 aa13.95□□□□□ -0.18
CLTCL1-201ENST00000412649 IMPAD1Q9NX62 359 aa13.95□□□□□ -0.18
CLTCL1-201ENST00000412649 NCF1BA6NI72 391 aaPredicted RBP13.95□□□□□ -0.18
CLTCL1-201ENST00000412649 NCF1CA8MVU1 366 aaPredicted RBP13.95□□□□□ -0.18
CLTCL1-201ENST00000412649 ACKR2O00590 384 aa13.95□□□□□ -0.18
CLTCL1-201ENST00000412649 SOCS2O14508 198 aa13.95□□□□□ -0.18
CLTCL1-201ENST00000412649 ATE1O95260 518 aa13.95□□□□□ -0.18
CLTCL1-201ENST00000412649 KRT6AP02538 564 aa13.95□□□□□ -0.18
CLTCL1-201ENST00000412649 KRT6BP04259 564 aa13.95□□□□□ -0.18
CLTCL1-201ENST00000412649 ANXA6P08133 673 aa13.95□□□□□ -0.18
CLTCL1-201ENST00000412649 NCF1P14598 390 aaPredicted RBP13.95□□□□□ -0.18
CLTCL1-201ENST00000412649 NCK1P16333 377 aa13.95□□□□□ -0.18
CLTCL1-201ENST00000412649 MRNIPQ6NTE8 343 aa13.95□□□□□ -0.18
CLTCL1-201ENST00000412649 NEK10Q6ZWH5 1172 aa13.95□□□□□ -0.18
CLTCL1-201ENST00000412649 VSIG10LQ86VR7 867 aa13.95□□□□□ -0.18
CLTCL1-201ENST00000412649 KBTBD8Q8NFY9 601 aa13.95□□□□□ -0.18
CLTCL1-201ENST00000412649 MAPK15Q8TD08 544 aa13.95□□□□□ -0.18
CLTCL1-201ENST00000412649 UBASH3BQ8TF42 649 aa13.95□□□□□ -0.18
CLTCL1-201ENST00000412649 ADAMTS10Q9H324 1103 aa13.95□□□□□ -0.18
CLTCL1-201ENST00000412649 WDCPQ9H6R7 721 aa13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms