RNA–Protein interactions for RNA: ENST00000411146.1

RNU2-55P-201, Transcript of RNA, U2 small nuclear 55, pseudogene, humanhuman

BASIC

Gene RNU2-55P, Length 174 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU2-55P-201ENST00000411146 NOVP48745 357 aa1.47□□□□□ -2.17
RNU2-55P-201ENST00000411146 AK2P54819 239 aa1.47□□□□□ -2.17
RNU2-55P-201ENST00000411146 DRG2P55039 364 aaKnown RBP1.47□□□□□ -2.17
RNU2-55P-201ENST00000411146 CLDN2P57739 230 aa1.47□□□□□ -2.17
RNU2-55P-201ENST00000411146 ISL1P61371 349 aa1.47□□□□□ -2.17
RNU2-55P-201ENST00000411146 LMO4P61968 165 aa1.47□□□□□ -2.17
RNU2-55P-201ENST00000411146 CUL4BQ13620 913 aa1.47□□□□□ -2.17
RNU2-55P-201ENST00000411146 TNFAIP1Q13829 316 aa1.47□□□□□ -2.17
RNU2-55P-201ENST00000411146 SYT16Q17RD7 645 aa1.47□□□□□ -2.17
RNU2-55P-201ENST00000411146 MMEL1Q495T6 779 aa1.47□□□□□ -2.17
RNU2-55P-201ENST00000411146 RUNDC3AQ59EK9 446 aa1.47□□□□□ -2.17
RNU2-55P-201ENST00000411146 ZC2HC1BQ5TFG8 222 aa1.47□□□□□ -2.17
RNU2-55P-201ENST00000411146 LRRC8EQ6NSJ5 796 aa1.47□□□□□ -2.17
RNU2-55P-201ENST00000411146 LCTLQ6UWM7 567 aa1.47□□□□□ -2.17
RNU2-55P-201ENST00000411146 ZNF852Q6ZMS4 543 aa1.47□□□□□ -2.17
RNU2-55P-201ENST00000411146 RAB11FIP2Q7L804 512 aa1.47□□□□□ -2.17
RNU2-55P-201ENST00000411146 CHD1LQ86WJ1 897 aa1.47□□□□□ -2.17
RNU2-55P-201ENST00000411146 CCDC117Q8IWD4 279 aaPredicted RBP1.47□□□□□ -2.17
RNU2-55P-201ENST00000411146 CHERPQ8IWX8 916 aaKnown RBP1.47□□□□□ -2.17
RNU2-55P-201ENST00000411146 FAM186BQ8IYM0 893 aa1.47□□□□□ -2.17
RNU2-55P-201ENST00000411146 PARP16Q8N5Y8 322 aa1.47□□□□□ -2.17
RNU2-55P-201ENST00000411146 DEPTORQ8TB45 409 aa1.47□□□□□ -2.17
RNU2-55P-201ENST00000411146 HMGCLL1Q8TB92 370 aa1.47□□□□□ -2.17
RNU2-55P-201ENST00000411146 GDPD5Q8WTR4 605 aa1.47□□□□□ -2.17
RNU2-55P-201ENST00000411146 RILPL2Q969X0 211 aa1.47□□□□□ -2.17
RNU2-55P-201ENST00000411146 RNF183Q96D59 192 aa1.47□□□□□ -2.17
RNU2-55P-201ENST00000411146 KTI12Q96EK9 354 aaPredicted RBP1.47□□□□□ -2.17
RNU2-55P-201ENST00000411146 MASTLQ96GX5 879 aa1.47□□□□□ -2.17
RNU2-55P-201ENST00000411146 NEUROD6Q96NK8 337 aa1.47□□□□□ -2.17
RNU2-55P-201ENST00000411146 TWNKQ96RR1 684 aa1.47□□□□□ -2.17
RNU2-55P-201ENST00000411146 MYD88Q99836 296 aa1.47□□□□□ -2.17
RNU2-55P-201ENST00000411146 DCTN5Q9BTE1 182 aa1.47□□□□□ -2.17
RNU2-55P-201ENST00000411146 CDK19Q9BWU1 502 aa1.47□□□□□ -2.17
RNU2-55P-201ENST00000411146 SLC32A1Q9H598 525 aa1.47□□□□□ -2.17
RNU2-55P-201ENST00000411146 DDX4Q9NQI0 724 aaKnown RBP1.47□□□□□ -2.17
RNU2-55P-201ENST00000411146 CHST12Q9NRB3 414 aa1.47□□□□□ -2.17
RNU2-55P-201ENST00000411146 ANKRD10Q9NXR5 420 aa1.47□□□□□ -2.17
RNU2-55P-201ENST00000411146 CTNNAL1Q9UBT7 734 aa1.47□□□□□ -2.17
RNU2-55P-201ENST00000411146 HERC5Q9UII4 1024 aaKnown RBP1.47□□□□□ -2.17
RNU2-55P-201ENST00000411146 BAG5Q9UL15 447 aa1.47□□□□□ -2.17
RNU2-55P-201ENST00000411146 TCF19Q9Y242 345 aa1.47□□□□□ -2.17
RNU2-55P-201ENST00000411146 VDAC3Q9Y277 283 aa1.47□□□□□ -2.17
RNU2-55P-201ENST00000411146 KCNK7Q9Y2U2 307 aa1.47□□□□□ -2.17
RNU2-55P-201ENST00000411146 CLDN16Q9Y5I7 305 aa1.47□□□□□ -2.17
RNU2-55P-201ENST00000411146 A0A087X002 238 aa1.46□□□□□ -2.18
RNU2-55P-201ENST00000411146 CBY3A6NI87 242 aa1.46□□□□□ -2.18
RNU2-55P-201ENST00000411146 HSPB2A8KAH6 182 aa1.46□□□□□ -2.18
RNU2-55P-201ENST00000411146 STX16-NPEPL1H3BU86 382 aa1.46□□□□□ -2.18
RNU2-55P-201ENST00000411146 ACKR2O00590 384 aa1.46□□□□□ -2.18
RNU2-55P-201ENST00000411146 STX16O14662 325 aa1.46□□□□□ -2.18
RNU2-55P-201ENST00000411146 DHX16O60231 1041 aaKnown RBP1.46□□□□□ -2.18
RNU2-55P-201ENST00000411146 ITGA2BP08514 1039 aa1.46□□□□□ -2.18
RNU2-55P-201ENST00000411146 KRT5P13647 590 aa1.46□□□□□ -2.18
RNU2-55P-201ENST00000411146 MYOD1P15172 320 aa1.46□□□□□ -2.18
RNU2-55P-201ENST00000411146 CD53P19397 219 aa1.46□□□□□ -2.18
RNU2-55P-201ENST00000411146 MCM3P25205 808 aa1.46□□□□□ -2.18
RNU2-55P-201ENST00000411146 PNPLA4P41247 253 aa1.46□□□□□ -2.18
RNU2-55P-201ENST00000411146 FMO5P49326 533 aa1.46□□□□□ -2.18
RNU2-55P-201ENST00000411146 RBM5P52756 815 aaKnown RBP eCLIP1.46□□□□□ -2.18
RNU2-55P-201ENST00000411146 KRTAP12-2P59991 146 aa1.46□□□□□ -2.18
RNU2-55P-201ENST00000411146 THOC5Q13769 683 aaKnown RBP1.46□□□□□ -2.18
RNU2-55P-201ENST00000411146 ARHGEF6Q15052 776 aa1.46□□□□□ -2.18
RNU2-55P-201ENST00000411146 SMAD1Q15797 465 aaKnown RBP1.46□□□□□ -2.18
RNU2-55P-201ENST00000411146 HSPB2Q16082 182 aa1.46□□□□□ -2.18
RNU2-55P-201ENST00000411146 SLC18A3Q16572 532 aa1.46□□□□□ -2.18
RNU2-55P-201ENST00000411146 EIF2S3LQ2VIR3 472 aaKnown RBP1.46□□□□□ -2.18
RNU2-55P-201ENST00000411146 BSPRYQ5W0U4 402 aa1.46□□□□□ -2.18
RNU2-55P-201ENST00000411146 JMJD6Q6NYC1 403 aaPredicted RBP1.46□□□□□ -2.18
RNU2-55P-201ENST00000411146 GJB7Q6PEY0 223 aa1.46□□□□□ -2.18
RNU2-55P-201ENST00000411146 KLHL17Q6TDP4 642 aa1.46□□□□□ -2.18
RNU2-55P-201ENST00000411146 KLHL24Q6TFL4 600 aa1.46□□□□□ -2.18
RNU2-55P-201ENST00000411146 RAD9BQ6WBX8 426 aa1.46□□□□□ -2.18
RNU2-55P-201ENST00000411146 FSIP1Q8NA03 581 aa1.46□□□□□ -2.18
RNU2-55P-201ENST00000411146 ZNF527Q8NB42 609 aa1.46□□□□□ -2.18
RNU2-55P-201ENST00000411146 KLHDC9Q8NEP7 349 aa1.46□□□□□ -2.18
RNU2-55P-201ENST00000411146 OR2AK2Q8NG84 335 aa1.46□□□□□ -2.18
RNU2-55P-201ENST00000411146 RBM17Q96I25 401 aaKnown RBP1.46□□□□□ -2.18
RNU2-55P-201ENST00000411146 HAUS8Q9BT25 410 aa1.46□□□□□ -2.18
RNU2-55P-201ENST00000411146 MOV10L1Q9BXT6 1211 aaKnown RBP1.46□□□□□ -2.18
RNU2-55P-201ENST00000411146 LMAN2LQ9H0V9 348 aa1.46□□□□□ -2.18
RNU2-55P-201ENST00000411146 TAF1DQ9H5J8 278 aaPredicted RBP1.46□□□□□ -2.18
RNU2-55P-201ENST00000411146 CHODLQ9H9P2 273 aa1.46□□□□□ -2.18
RNU2-55P-201ENST00000411146 ABCF3Q9NUQ8 709 aa1.46□□□□□ -2.18
RNU2-55P-201ENST00000411146 TMEM30AQ9NV96 361 aa1.46□□□□□ -2.18
RNU2-55P-201ENST00000411146 PAK5Q9P286 719 aa1.46□□□□□ -2.18
RNU2-55P-201ENST00000411146 GRHPRQ9UBQ7 328 aa1.46□□□□□ -2.18
RNU2-55P-201ENST00000411146 SRP68Q9UHB9 627 aaKnown RBP1.46□□□□□ -2.18
RNU2-55P-201ENST00000411146 OR2W1Q9Y3N9 320 aa1.46□□□□□ -2.18
RNU2-55P-201ENST00000411146 NFE2L3Q9Y4A8 694 aa1.46□□□□□ -2.18
RNU2-55P-201ENST00000411146 PCNX3Q9H6A9 2034 aa1.45□□□□□ -2.18
RNU2-55P-201ENST00000411146 TDRD15B5MCY1 1934 aaKnown RBP1.45□□□□□ -2.18
RNU2-55P-201ENST00000411146 A0A0U1RQF3 1178 aa1.45□□□□□ -2.18
RNU2-55P-201ENST00000411146 A0A1W2PS18 150 aa1.45□□□□□ -2.18
RNU2-55P-201ENST00000411146 HMX3A6NHT5 357 aa1.45□□□□□ -2.18
RNU2-55P-201ENST00000411146 FAM72CH0Y354 149 aa1.45□□□□□ -2.18
RNU2-55P-201ENST00000411146 IPO5O00410 1097 aaKnown RBP1.45□□□□□ -2.18
RNU2-55P-201ENST00000411146 CCNT1O60563 726 aaKnown RBP1.45□□□□□ -2.18
RNU2-55P-201ENST00000411146 GAGE7O76087 117 aa1.45□□□□□ -2.18
RNU2-55P-201ENST00000411146 METTL18O95568 372 aa1.45□□□□□ -2.18
RNU2-55P-201ENST00000411146 CYC1P08574 325 aa1.45□□□□□ -2.18
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms