RNA–Protein interactions for RNA: ENST00000409954.6

MCF2L-210, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 5

Gene MCF2L, Length 574 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-210ENST00000409954 NR1I3Q14994 352 aa14.63□□□□□ -0.07
MCF2L-210ENST00000409954 CA9Q16790 459 aa14.63□□□□□ -0.07
MCF2L-210ENST00000409954 ISXQ2M1V0 245 aa14.63□□□□□ -0.07
MCF2L-210ENST00000409954 LRRC73Q5JTD7 316 aa14.63□□□□□ -0.07
MCF2L-210ENST00000409954 C6orf132Q5T0Z8 1188 aa14.63□□□□□ -0.07
MCF2L-210ENST00000409954 IGF2-ASQ6U949 168 aa14.63□□□□□ -0.07
MCF2L-210ENST00000409954 EFL1Q7Z2Z2 1120 aaKnown RBP14.63□□□□□ -0.07
MCF2L-210ENST00000409954 TSEN2Q8NCE0 465 aaKnown RBP14.63□□□□□ -0.07
MCF2L-210ENST00000409954 LSM14AQ8ND56 463 aaKnown RBP14.63□□□□□ -0.07
MCF2L-210ENST00000409954 OR6C4Q8NGE1 309 aa14.63□□□□□ -0.07
MCF2L-210ENST00000409954 EXOC2Q96KP1 924 aa14.63□□□□□ -0.07
MCF2L-210ENST00000409954 ZNF599Q96NL3 588 aa14.63□□□□□ -0.07
MCF2L-210ENST00000409954 UBL7Q96S82 380 aaPredicted RBP14.63□□□□□ -0.07
MCF2L-210ENST00000409954 SNRNP25Q9BV90 132 aaKnown RBP14.63□□□□□ -0.07
MCF2L-210ENST00000409954 CINPQ9BW66 212 aaPredicted RBP14.63□□□□□ -0.07
MCF2L-210ENST00000409954 ISCUQ9H1K1 167 aa14.63□□□□□ -0.07
MCF2L-210ENST00000409954 PRORYQ9H606 182 aa14.63□□□□□ -0.07
MCF2L-210ENST00000409954 CAAP1Q9H8G2 361 aa14.63□□□□□ -0.07
MCF2L-210ENST00000409954 ZWILCHQ9H900 591 aa14.63□□□□□ -0.07
MCF2L-210ENST00000409954 SP110Q9HB58 689 aa14.63□□□□□ -0.07
MCF2L-210ENST00000409954 GPATCH2LQ9NWQ4 482 aa14.63□□□□□ -0.07
MCF2L-210ENST00000409954 KCTD5Q9NXV2 234 aa14.63□□□□□ -0.07
MCF2L-210ENST00000409954 TMEM63CQ9P1W3 806 aa14.63□□□□□ -0.07
MCF2L-210ENST00000409954 PADI4Q9UM07 663 aa14.63□□□□□ -0.07
MCF2L-210ENST00000409954 ATP8A1Q9Y2Q0 1164 aa14.63□□□□□ -0.07
MCF2L-210ENST00000409954 SPEGQ15772 3267 aa14.62□□□□□ -0.07
MCF2L-210ENST00000409954 A0A1B0GTH6 734 aa14.62□□□□□ -0.07
MCF2L-210ENST00000409954 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP14.62□□□□□ -0.07
MCF2L-210ENST00000409954 TK2O00142 265 aa14.62□□□□□ -0.07
MCF2L-210ENST00000409954 DDX3XO00571 662 aaKnown RBP eCLIP14.62□□□□□ -0.07
MCF2L-210ENST00000409954 TNFP01375 233 aa14.62□□□□□ -0.07
MCF2L-210ENST00000409954 HOXC4P09017 264 aaPredicted RBP14.62□□□□□ -0.07
MCF2L-210ENST00000409954 C6P13671 934 aa14.62□□□□□ -0.07
MCF2L-210ENST00000409954 TGM2P21980 687 aa14.62□□□□□ -0.07
MCF2L-210ENST00000409954 MTM1Q13496 603 aa14.62□□□□□ -0.07
MCF2L-210ENST00000409954 IRF4Q15306 451 aa14.62□□□□□ -0.07
MCF2L-210ENST00000409954 PPP6R3Q5H9R7 873 aaPredicted RBP14.62□□□□□ -0.07
MCF2L-210ENST00000409954 FIGNQ5HY92 759 aa14.62□□□□□ -0.07
MCF2L-210ENST00000409954 GUSBP11Q6P575 273 aa14.62□□□□□ -0.07
MCF2L-210ENST00000409954 ENPP7Q6UWV6 458 aa14.62□□□□□ -0.07
MCF2L-210ENST00000409954 GKN2Q86XP6 184 aa14.62□□□□□ -0.07
MCF2L-210ENST00000409954 ARHGAP12Q8IWW6 846 aa14.62□□□□□ -0.07
MCF2L-210ENST00000409954 RBFAQ8N0V3 343 aa14.62□□□□□ -0.07
MCF2L-210ENST00000409954 ECHDC3Q96DC8 303 aa14.62□□□□□ -0.07
MCF2L-210ENST00000409954 NAP1L5Q96NT1 182 aaPredicted RBP14.62□□□□□ -0.07
MCF2L-210ENST00000409954 PSKH2Q96QS6 385 aa14.62□□□□□ -0.07
MCF2L-210ENST00000409954 KCTD15Q96SI1 283 aaPredicted RBP14.62□□□□□ -0.07
MCF2L-210ENST00000409954 LRRC61Q9BV99 259 aa14.62□□□□□ -0.07
MCF2L-210ENST00000409954 CLPBQ9H078 707 aa14.62□□□□□ -0.07
MCF2L-210ENST00000409954 TCEAL2Q9H3H9 227 aaPredicted RBP14.62□□□□□ -0.07
MCF2L-210ENST00000409954 CWC15Q9P013 229 aaKnown RBP14.62□□□□□ -0.07
MCF2L-210ENST00000409954 SEPT3Q9UH03 358 aa14.62□□□□□ -0.07
MCF2L-210ENST00000409954 PCDHB1Q9Y5F3 818 aa14.62□□□□□ -0.07
MCF2L-210ENST00000409954 FREM2Q5SZK8 3169 aa14.61□□□□□ -0.07
MCF2L-210ENST00000409954 DFFAO00273 331 aa14.61□□□□□ -0.07
MCF2L-210ENST00000409954 MUSKO15146 869 aa14.61□□□□□ -0.07
MCF2L-210ENST00000409954 LRCH4O75427 683 aa14.61□□□□□ -0.07
MCF2L-210ENST00000409954 SERPINC1P01008 464 aa14.61□□□□□ -0.07
MCF2L-210ENST00000409954 MPOP05164 745 aa14.61□□□□□ -0.07
MCF2L-210ENST00000409954 KELP23276 732 aa14.61□□□□□ -0.07
MCF2L-210ENST00000409954 NFKBIAP25963 317 aa14.61□□□□□ -0.07
MCF2L-210ENST00000409954 RBMS1P29558 406 aaKnown RBP14.61□□□□□ -0.07
MCF2L-210ENST00000409954 ARL4AP40617 200 aa14.61□□□□□ -0.07
MCF2L-210ENST00000409954 SCNN1BP51168 640 aa14.61□□□□□ -0.07
MCF2L-210ENST00000409954 PCBP4P57723 403 aaKnown RBP14.61□□□□□ -0.07
MCF2L-210ENST00000409954 SRP54P61011 504 aaKnown RBP14.61□□□□□ -0.07
MCF2L-210ENST00000409954 AP1S1P61966 158 aa14.61□□□□□ -0.07
MCF2L-210ENST00000409954 GABREP78334 506 aa14.61□□□□□ -0.07
MCF2L-210ENST00000409954 PIGHQ14442 188 aaPredicted RBP14.61□□□□□ -0.07
MCF2L-210ENST00000409954 NFATC4Q14934 902 aa14.61□□□□□ -0.07
MCF2L-210ENST00000409954 RBM44Q6ZP01 1051 aaKnown RBP14.61□□□□□ -0.07
MCF2L-210ENST00000409954 HID1Q8IV36 788 aa14.61□□□□□ -0.07
MCF2L-210ENST00000409954 SLC35F3Q8IY50 421 aa14.61□□□□□ -0.07
MCF2L-210ENST00000409954 PAF1Q8N7H5 531 aa14.61□□□□□ -0.07
MCF2L-210ENST00000409954 SPOCK2Q92563 424 aa14.61□□□□□ -0.07
MCF2L-210ENST00000409954 SYN2Q92777 582 aaPredicted RBP14.61□□□□□ -0.07
MCF2L-210ENST00000409954 TSACCQ96A04 125 aaPredicted RBP14.61□□□□□ -0.07
MCF2L-210ENST00000409954 HIC2Q96JB3 615 aa14.61□□□□□ -0.07
MCF2L-210ENST00000409954 DPH1Q9BZG8 443 aa14.61□□□□□ -0.07
MCF2L-210ENST00000409954 THSD1Q9NS62 852 aa14.61□□□□□ -0.07
MCF2L-210ENST00000409954 COQ6Q9Y2Z9 468 aa14.61□□□□□ -0.07
MCF2L-210ENST00000409954 CHD5Q8TDI0 1954 aa14.61□□□□□ -0.07
MCF2L-210ENST00000409954 H3BRJ5 948 aa14.6□□□□□ -0.07
MCF2L-210ENST00000409954 TMX2-CTNND1H3BSU7 103 aa14.6□□□□□ -0.07
MCF2L-210ENST00000409954 PDE2AO00408 941 aaPredicted RBP14.6□□□□□ -0.07
MCF2L-210ENST00000409954 TNFRSF10CO14798 259 aa14.6□□□□□ -0.07
MCF2L-210ENST00000409954 RECQL5O94762 991 aaPredicted RBP14.6□□□□□ -0.07
MCF2L-210ENST00000409954 TRIM23P36406 574 aa14.6□□□□□ -0.07
MCF2L-210ENST00000409954 HSPA9P38646 679 aaKnown RBP14.6□□□□□ -0.07
MCF2L-210ENST00000409954 MMP12P39900 470 aa14.6□□□□□ -0.07
MCF2L-210ENST00000409954 MLLT3P42568 568 aaPredicted RBP14.6□□□□□ -0.07
MCF2L-210ENST00000409954 UCNP55089 124 aa14.6□□□□□ -0.07
MCF2L-210ENST00000409954 TPM4P67936 248 aa14.6□□□□□ -0.07
MCF2L-210ENST00000409954 TLE3Q04726 772 aa14.6□□□□□ -0.07
MCF2L-210ENST00000409954 CCDC173Q0VFZ6 552 aa14.6□□□□□ -0.07
MCF2L-210ENST00000409954 LBRQ14739 615 aaKnown RBP14.6□□□□□ -0.07
MCF2L-210ENST00000409954 BROXQ5VW32 411 aa14.6□□□□□ -0.07
MCF2L-210ENST00000409954 LIPIQ6XZB0 460 aa14.6□□□□□ -0.07
MCF2L-210ENST00000409954 GPR155Q7Z3F1 870 aa14.6□□□□□ -0.07
MCF2L-210ENST00000409954 RD3Q7Z3Z2 195 aa14.6□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 133 ms