RNA–Protein interactions for RNA: ENST00000409782.5

LSM5-203, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 5 BASIC

Gene LSM5, Length 649 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-203ENST00000409782 CCNIQ14094 377 aa6.49□□□□□ -1.37
LSM5-203ENST00000409782 TFDP1Q14186 410 aa6.49□□□□□ -1.37
LSM5-203ENST00000409782 MXD4Q14582 209 aaPredicted RBP6.49□□□□□ -1.37
LSM5-203ENST00000409782 TSTQ16762 297 aaKnown RBP6.49□□□□□ -1.37
LSM5-203ENST00000409782 RILPL1Q5EBL4 403 aa6.49□□□□□ -1.37
LSM5-203ENST00000409782 XKR9Q5GH70 373 aa6.49□□□□□ -1.37
LSM5-203ENST00000409782 GLB1LQ6UWU2 654 aa6.49□□□□□ -1.37
LSM5-203ENST00000409782 MED25Q71SY5 747 aa6.49□□□□□ -1.37
LSM5-203ENST00000409782 CATSPER4Q7RTX7 472 aa6.49□□□□□ -1.37
LSM5-203ENST00000409782 RHPN2Q8IUC4 686 aa6.49□□□□□ -1.37
LSM5-203ENST00000409782 RHOT2Q8IXI1 618 aa6.49□□□□□ -1.37
LSM5-203ENST00000409782 RNF169Q8NCN4 708 aa6.49□□□□□ -1.37
LSM5-203ENST00000409782 MCPH1Q8NEM0 835 aa6.49□□□□□ -1.37
LSM5-203ENST00000409782 MDGA1Q8NFP4 955 aa6.49□□□□□ -1.37
LSM5-203ENST00000409782 SUN3Q8TAQ9 357 aa6.49□□□□□ -1.37
LSM5-203ENST00000409782 DNAJB14Q8TBM8 379 aa6.49□□□□□ -1.37
LSM5-203ENST00000409782 ST8SIA2Q92186 375 aa6.49□□□□□ -1.37
LSM5-203ENST00000409782 PPP2R3CQ969Q6 453 aa6.49□□□□□ -1.37
LSM5-203ENST00000409782 RNF125Q96EQ8 232 aa6.49□□□□□ -1.37
LSM5-203ENST00000409782 CCDC51Q96ER9 411 aa6.49□□□□□ -1.37
LSM5-203ENST00000409782 CPPED1Q9BRF8 314 aaPredicted RBP6.49□□□□□ -1.37
LSM5-203ENST00000409782 SH2D3AQ9BRG2 576 aa6.49□□□□□ -1.37
LSM5-203ENST00000409782 FUZQ9BT04 418 aa6.49□□□□□ -1.37
LSM5-203ENST00000409782 POLR3CQ9BUI4 534 aaPredicted RBP6.49□□□□□ -1.37
LSM5-203ENST00000409782 MRPL9Q9BYD2 267 aaKnown RBP6.49□□□□□ -1.37
LSM5-203ENST00000409782 RAB34Q9BZG1 259 aa6.49□□□□□ -1.37
LSM5-203ENST00000409782 BRD8Q9H0E9 1235 aa6.49□□□□□ -1.37
LSM5-203ENST00000409782 SERHL2Q9H4I8 314 aa6.49□□□□□ -1.37
LSM5-203ENST00000409782 XPNPEP1Q9NQW7 623 aa6.49□□□□□ -1.37
LSM5-203ENST00000409782 LIN7CQ9NUP9 197 aaKnown RBP6.49□□□□□ -1.37
LSM5-203ENST00000409782 CTTNBP2NLQ9P2B4 639 aa6.49□□□□□ -1.37
LSM5-203ENST00000409782 PIN4Q9Y237 131 aaKnown RBP6.49□□□□□ -1.37
LSM5-203ENST00000409782 ZSCAN21Q9Y5A6 473 aaPredicted RBP6.49□□□□□ -1.37
LSM5-203ENST00000409782 FNDC1Q4ZHG4 1894 aaPredicted RBP6.49□□□□□ -1.37
LSM5-203ENST00000409782 ZMYM2Q9UBW7 1377 aa6.48□□□□□ -1.37
LSM5-203ENST00000409782 CCDC78A2IDD5 438 aa6.48□□□□□ -1.37
LSM5-203ENST00000409782 H3BQV1 296 aa6.48□□□□□ -1.37
LSM5-203ENST00000409782 PRSS23O95084 383 aa6.48□□□□□ -1.37
LSM5-203ENST00000409782 ATF7P17544 494 aaPredicted RBP6.48□□□□□ -1.37
LSM5-203ENST00000409782 HK1P19367 917 aa6.48□□□□□ -1.37
LSM5-203ENST00000409782 ITGALP20701 1170 aa6.48□□□□□ -1.37
LSM5-203ENST00000409782 FGFR4P22455 802 aa6.48□□□□□ -1.37
LSM5-203ENST00000409782 RRM1P23921 792 aa6.48□□□□□ -1.37
LSM5-203ENST00000409782 RPA1P27694 616 aa6.48□□□□□ -1.37
LSM5-203ENST00000409782 GJB2P29033 226 aa6.48□□□□□ -1.37
LSM5-203ENST00000409782 EPHA3P29320 983 aa6.48□□□□□ -1.37
LSM5-203ENST00000409782 AXLP30530 894 aa6.48□□□□□ -1.37
LSM5-203ENST00000409782 HTR7P34969 479 aa6.48□□□□□ -1.37
LSM5-203ENST00000409782 PRPHP41219 470 aa6.48□□□□□ -1.37
LSM5-203ENST00000409782 POLD2P49005 469 aa6.48□□□□□ -1.37
LSM5-203ENST00000409782 GATMP50440 423 aa6.48□□□□□ -1.37
LSM5-203ENST00000409782 ANXA11P50995 505 aaKnown RBP6.48□□□□□ -1.37
LSM5-203ENST00000409782 CCR9P51686 369 aa6.48□□□□□ -1.37
LSM5-203ENST00000409782 PGDP52209 483 aa6.48□□□□□ -1.37
LSM5-203ENST00000409782 CHN2P52757 468 aa6.48□□□□□ -1.37
LSM5-203ENST00000409782 SF3A3Q12874 501 aaKnown RBP eCLIP6.48□□□□□ -1.371e-7■■■■□ 19.8
LSM5-203ENST00000409782 CUL4AQ13619 759 aa6.48□□□□□ -1.37
LSM5-203ENST00000409782 PRICKLE4Q2TBC4 344 aa6.48□□□□□ -1.37
LSM5-203ENST00000409782 TWF2Q6IBS0 349 aaKnown RBP6.48□□□□□ -1.37
LSM5-203ENST00000409782 INO80CQ6PI98 192 aaPredicted RBP6.48□□□□□ -1.37
LSM5-203ENST00000409782 ZSCAN2Q7Z7L9 614 aaPredicted RBP6.48□□□□□ -1.37
LSM5-203ENST00000409782 CATSPER3Q86XQ3 398 aa6.48□□□□□ -1.37
LSM5-203ENST00000409782 NKAIN3Q8N8D7 197 aa6.48□□□□□ -1.37
LSM5-203ENST00000409782 RNF149Q8NC42 400 aa6.48□□□□□ -1.37
LSM5-203ENST00000409782 SLC2A12Q8TD20 617 aa6.48□□□□□ -1.37
LSM5-203ENST00000409782 CREB3L4Q8TEY5 395 aa6.48□□□□□ -1.37
LSM5-203ENST00000409782 SLC22A17Q8WUG5 538 aa6.48□□□□□ -1.37
LSM5-203ENST00000409782 PRPF31Q8WWY3 499 aaKnown RBP6.48□□□□□ -1.37
LSM5-203ENST00000409782 TMEM143Q96AN5 459 aa6.48□□□□□ -1.37
LSM5-203ENST00000409782 HIST1H2AAQ96QV6 131 aa6.48□□□□□ -1.37
LSM5-203ENST00000409782 NFKBIZQ9BYH8 718 aa6.48□□□□□ -1.37
LSM5-203ENST00000409782 POLR3FQ9H1D9 316 aaPredicted RBP6.48□□□□□ -1.37
LSM5-203ENST00000409782 UBE2ZQ9H832 354 aaPredicted RBP6.48□□□□□ -1.37
LSM5-203ENST00000409782 KCNK9Q9NPC2 374 aa6.48□□□□□ -1.37
LSM5-203ENST00000409782 NDRG4Q9ULP0 352 aaKnown RBP6.48□□□□□ -1.37
LSM5-203ENST00000409782 SMC3Q9UQE7 1217 aa6.48□□□□□ -1.37
LSM5-203ENST00000409782 ATG2AQ2TAZ0 1938 aa6.48□□□□□ -1.37
LSM5-203ENST00000409782 A0A1W2PRQ8 180 aa6.47□□□□□ -1.37
LSM5-203ENST00000409782 ARHGEF35A5YM69 484 aa6.47□□□□□ -1.37
LSM5-203ENST00000409782 NPEPPSL1A6NEC2 478 aa6.47□□□□□ -1.37
LSM5-203ENST00000409782 ZNF623O75123 536 aa6.47□□□□□ -1.37
LSM5-203ENST00000409782 GUCY1B2O75343 617 aa6.47□□□□□ -1.37
LSM5-203ENST00000409782 MED24O75448 989 aa6.47□□□□□ -1.37
LSM5-203ENST00000409782 CSDE1O75534 798 aaKnown RBP6.47□□□□□ -1.37
LSM5-203ENST00000409782 KRT38O76015 456 aa6.47□□□□□ -1.37
LSM5-203ENST00000409782 ERLIN2O94905 339 aa6.47□□□□□ -1.37
LSM5-203ENST00000409782 BMP15O95972 392 aa6.47□□□□□ -1.37
LSM5-203ENST00000409782 F9P00740 461 aa6.47□□□□□ -1.37
LSM5-203ENST00000409782 GLRA2P23416 452 aa6.47□□□□□ -1.37
LSM5-203ENST00000409782 ABCD3P28288 659 aa6.47□□□□□ -1.37
LSM5-203ENST00000409782 PRKAR1BP31321 381 aa6.47□□□□□ -1.37
LSM5-203ENST00000409782 UQCRC1P31930 480 aa6.47□□□□□ -1.37
LSM5-203ENST00000409782 ARL2P36404 184 aa6.47□□□□□ -1.37
LSM5-203ENST00000409782 PRKAG1P54619 331 aa6.47□□□□□ -1.37
LSM5-203ENST00000409782 PTENP60484 403 aa6.47□□□□□ -1.37
LSM5-203ENST00000409782 ARF3P61204 181 aaPredicted RBP6.47□□□□□ -1.37
LSM5-203ENST00000409782 ARF1P84077 181 aaKnown RBP6.47□□□□□ -1.37
LSM5-203ENST00000409782 FHL3Q13643 280 aa6.47□□□□□ -1.37
LSM5-203ENST00000409782 CAPSQ13938 189 aa6.47□□□□□ -1.37
LSM5-203ENST00000409782 E2F2Q14209 437 aa6.47□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms