RNA–Protein interactions for RNA: ENST00000409417.5

PDLIM2-207, Transcript of PDZ and LIM domain 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM2, Length 1,487 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-207ENST00000409417 TMEM52BQ4KMG9 183 aa19.99■□□□□ 0.79
PDLIM2-207ENST00000409417 ARMC12Q5T9G4 340 aa19.99■□□□□ 0.79
PDLIM2-207ENST00000409417 REXO1L1PQ8IX06 675 aa19.99■□□□□ 0.79
PDLIM2-207ENST00000409417 TMEM145Q8NBT3 493 aa19.99■□□□□ 0.79
PDLIM2-207ENST00000409417 PDCD6IPQ8WUM4 868 aaKnown RBP19.99■□□□□ 0.79
PDLIM2-207ENST00000409417 HTR3CQ8WXA8 447 aa19.99■□□□□ 0.79
PDLIM2-207ENST00000409417 KLK6Q92876 244 aa19.99■□□□□ 0.79
PDLIM2-207ENST00000409417 AGAP3Q96P47 875 aa19.99■□□□□ 0.79
PDLIM2-207ENST00000409417 EDEM2Q9BV94 578 aa19.99■□□□□ 0.79
PDLIM2-207ENST00000409417 CEP41Q9BYV8 373 aa19.99■□□□□ 0.79
PDLIM2-207ENST00000409417 ZDHHC5Q9C0B5 715 aa19.99■□□□□ 0.79
PDLIM2-207ENST00000409417 AASDHPPTQ9NRN7 309 aa19.99■□□□□ 0.79
PDLIM2-207ENST00000409417 LOC105378220A0A1B0GUY1 285 aaPredicted RBP19.98■□□□□ 0.79
PDLIM2-207ENST00000409417 H7C0C1 242 aa19.98■□□□□ 0.79
PDLIM2-207ENST00000409417 WNT9AO14904 365 aa19.98■□□□□ 0.79
PDLIM2-207ENST00000409417 CD38P28907 300 aa19.98■□□□□ 0.79
PDLIM2-207ENST00000409417 MMP12P39900 470 aa19.98■□□□□ 0.79
PDLIM2-207ENST00000409417 ATP5OP48047 213 aa19.98■□□□□ 0.79
PDLIM2-207ENST00000409417 CCDC173Q0VFZ6 552 aa19.98■□□□□ 0.79
PDLIM2-207ENST00000409417 KLF1Q13351 362 aaPredicted RBP19.98■□□□□ 0.79
PDLIM2-207ENST00000409417 TTC13Q8NBP0 860 aa19.98■□□□□ 0.79
PDLIM2-207ENST00000409417 CXorf40AQ8TE69 158 aa19.98■□□□□ 0.79
PDLIM2-207ENST00000409417 ASB12Q8WXK4 309 aa19.98■□□□□ 0.79
PDLIM2-207ENST00000409417 TEKT5Q96M29 485 aa19.98■□□□□ 0.79
PDLIM2-207ENST00000409417 VAT1Q99536 393 aa19.98■□□□□ 0.79
PDLIM2-207ENST00000409417 TLR10Q9BXR5 811 aa19.98■□□□□ 0.79
PDLIM2-207ENST00000409417 CARD9Q9H257 536 aa19.98■□□□□ 0.79
PDLIM2-207ENST00000409417 FSCN3Q9NQT6 498 aa19.98■□□□□ 0.79
PDLIM2-207ENST00000409417 PHTF1Q9UMS5 762 aa19.98■□□□□ 0.79
PDLIM2-207ENST00000409417 A0A1B0GVT2 93 aa19.97■□□□□ 0.79
PDLIM2-207ENST00000409417 VILLO15195 856 aa19.97■□□□□ 0.79
PDLIM2-207ENST00000409417 FZD6O60353 706 aa19.97■□□□□ 0.79
PDLIM2-207ENST00000409417 MMP20O60882 483 aa19.97■□□□□ 0.79
PDLIM2-207ENST00000409417 CPP00450 1065 aa19.97■□□□□ 0.79
PDLIM2-207ENST00000409417 PRKCGP05129 697 aa19.97■□□□□ 0.79
PDLIM2-207ENST00000409417 HNRNPA2B1P22626 353 aaKnown RBP19.97■□□□□ 0.79
PDLIM2-207ENST00000409417 CA4P22748 312 aa19.97■□□□□ 0.79
PDLIM2-207ENST00000409417 AKT2P31751 481 aa19.97■□□□□ 0.79
PDLIM2-207ENST00000409417 CD86P42081 329 aa19.97■□□□□ 0.79
PDLIM2-207ENST00000409417 EIF3EP60228 445 aaKnown RBP19.97■□□□□ 0.79
PDLIM2-207ENST00000409417 FAM193AP78312 1265 aa19.97■□□□□ 0.79
PDLIM2-207ENST00000409417 GRIK2Q13002 908 aa19.97■□□□□ 0.79
PDLIM2-207ENST00000409417 FGL2Q14314 439 aa19.97■□□□□ 0.79
PDLIM2-207ENST00000409417 STAT4Q14765 748 aa19.97■□□□□ 0.79
PDLIM2-207ENST00000409417 SEL1L2Q5TEA6 688 aa19.97■□□□□ 0.79
PDLIM2-207ENST00000409417 ADAT2Q7Z6V5 191 aaKnown RBP19.97■□□□□ 0.79
PDLIM2-207ENST00000409417 NETO1Q8TDF5 533 aa19.97■□□□□ 0.79
PDLIM2-207ENST00000409417 SKA1Q96BD8 255 aa19.97■□□□□ 0.79
PDLIM2-207ENST00000409417 IMP4Q96G21 291 aaKnown RBP19.97■□□□□ 0.79
PDLIM2-207ENST00000409417 WRAP53Q9BUR4 548 aaKnown RBP19.97■□□□□ 0.79
PDLIM2-207ENST00000409417 SLC25A51Q9H1U9 297 aa19.97■□□□□ 0.79
PDLIM2-207ENST00000409417 ANKRD6Q9Y2G4 727 aa19.97■□□□□ 0.79
PDLIM2-207ENST00000409417 A0A1W2PR77 199 aa19.96■□□□□ 0.79
PDLIM2-207ENST00000409417 PAK4O96013 591 aaPredicted RBP19.96■□□□□ 0.79
PDLIM2-207ENST00000409417 MMP2P08253 660 aa19.96■□□□□ 0.79
PDLIM2-207ENST00000409417 RBP3P10745 1247 aa19.96■□□□□ 0.79
PDLIM2-207ENST00000409417 NFKBIAP25963 317 aa19.96■□□□□ 0.79
PDLIM2-207ENST00000409417 LIMK1P53667 647 aa19.96■□□□□ 0.79
PDLIM2-207ENST00000409417 ATXN3P54252 364 aaPredicted RBP19.96■□□□□ 0.79
PDLIM2-207ENST00000409417 BNC1Q01954 994 aa19.96■□□□□ 0.79
PDLIM2-207ENST00000409417 OVGP1Q12889 678 aa19.96■□□□□ 0.79
PDLIM2-207ENST00000409417 IL27RAQ6UWB1 636 aa19.96■□□□□ 0.79
PDLIM2-207ENST00000409417 LAYNQ6UX15 382 aa19.96■□□□□ 0.79
PDLIM2-207ENST00000409417 DPPA4Q7L190 304 aa19.96■□□□□ 0.79
PDLIM2-207ENST00000409417 IQCHQ86VS3 1027 aa19.96■□□□□ 0.79
PDLIM2-207ENST00000409417 CDKL3Q8IVW4 592 aaPredicted RBP19.96■□□□□ 0.79
PDLIM2-207ENST00000409417 MFSD2AQ8NA29 543 aa19.96■□□□□ 0.79
PDLIM2-207ENST00000409417 PIH1D2Q8WWB5 315 aa19.96■□□□□ 0.79
PDLIM2-207ENST00000409417 LENG8Q96PV6 779 aaPredicted RBP19.96■□□□□ 0.79
PDLIM2-207ENST00000409417 FERMT1Q9BQL6 677 aa19.96■□□□□ 0.79
PDLIM2-207ENST00000409417 TDRD1Q9BXT4 1180 aaKnown RBP19.96■□□□□ 0.79
PDLIM2-207ENST00000409417 GLOD4Q9HC38 313 aa19.96■□□□□ 0.79
PDLIM2-207ENST00000409417 TMEM9BQ9NQ34 198 aa19.96■□□□□ 0.79
PDLIM2-207ENST00000409417 PPIL1Q9Y3C6 166 aa19.96■□□□□ 0.79
PDLIM2-207ENST00000409417 DOCK9Q9BZ29 2069 aa19.96■□□□□ 0.79
PDLIM2-207ENST00000409417 CFAP69A5D8W1 941 aa19.95■□□□□ 0.78
PDLIM2-207ENST00000409417 CDX4O14627 284 aaPredicted RBP19.95■□□□□ 0.78
PDLIM2-207ENST00000409417 KCNK3O14649 394 aa19.95■□□□□ 0.78
PDLIM2-207ENST00000409417 TM7SF2O76062 418 aa19.95■□□□□ 0.78
PDLIM2-207ENST00000409417 WNT1P04628 370 aa19.95■□□□□ 0.78
PDLIM2-207ENST00000409417 PDHA1P08559 390 aa19.95■□□□□ 0.78
PDLIM2-207ENST00000409417 RBL1P28749 1068 aa19.95■□□□□ 0.78
PDLIM2-207ENST00000409417 C21orf59P57076 290 aa19.95■□□□□ 0.78
PDLIM2-207ENST00000409417 RPL26P61254 145 aaKnown RBP19.95■□□□□ 0.78
PDLIM2-207ENST00000409417 SKOR1P84550 965 aa19.95■□□□□ 0.78
PDLIM2-207ENST00000409417 SLC14A2Q15849 920 aa19.95■□□□□ 0.78
PDLIM2-207ENST00000409417 KIF19Q2TAC6 998 aa19.95■□□□□ 0.78
PDLIM2-207ENST00000409417 FAM182AQ5T1J6 154 aa19.95■□□□□ 0.78
PDLIM2-207ENST00000409417 STPG1Q5TH74 334 aa19.95■□□□□ 0.78
PDLIM2-207ENST00000409417 SCRN2Q96FV2 425 aa19.95■□□□□ 0.78
PDLIM2-207ENST00000409417 MCCC1Q96RQ3 725 aaPredicted RBP19.95■□□□□ 0.78
PDLIM2-207ENST00000409417 FAM118BQ9BPY3 351 aa19.95■□□□□ 0.78
PDLIM2-207ENST00000409417 GTPBP2Q9BX10 602 aaKnown RBP19.95■□□□□ 0.78
PDLIM2-207ENST00000409417 TRHDEQ9UKU6 1024 aa19.95■□□□□ 0.78
PDLIM2-207ENST00000409417 RPL26L1Q9UNX3 145 aaKnown RBP19.95■□□□□ 0.78
PDLIM2-207ENST00000409417 ANKRD36A6QL64 1941 aa19.95■□□□□ 0.78
PDLIM2-207ENST00000409417 PCDH15Q96QU1 1955 aa19.94■□□□□ 0.78
PDLIM2-207ENST00000409417 TCRBV7S2A1N4TA0A589 114 aa19.94■□□□□ 0.78
PDLIM2-207ENST00000409417 ZNF189O75820 626 aaPredicted RBP19.94■□□□□ 0.78
PDLIM2-207ENST00000409417 PRLP01236 227 aa19.94■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms