RNA–Protein interactions for RNA: ENST00000409402.8

SPIRE1-202, Transcript of spire type actin nucleation factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SPIRE1, Length 5,665 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIRE1-202ENST00000409402 H0Y858 1186 aa25.17■■□□□ 1.62
SPIRE1-202ENST00000409402 MDM4O15151 490 aa25.17■■□□□ 1.62
SPIRE1-202ENST00000409402 GRIA4P48058 902 aa25.17■■□□□ 1.62
SPIRE1-202ENST00000409402 IZUMO2Q6UXV1 221 aa25.17■■□□□ 1.62
SPIRE1-202ENST00000409402 CYP2R1Q6VVX0 501 aa25.17■■□□□ 1.62
SPIRE1-202ENST00000409402 XYLT1Q86Y38 959 aa25.17■■□□□ 1.62
SPIRE1-202ENST00000409402 TMEM191CA6NGB0 347 aa25.17■■□□□ 1.62
SPIRE1-202ENST00000409402 AVILO75366 819 aa25.17■■□□□ 1.62
SPIRE1-202ENST00000409402 ERN1O75460 977 aaKnown RBP25.17■■□□□ 1.62
SPIRE1-202ENST00000409402 SQLEQ14534 574 aa25.17■■□□□ 1.62
SPIRE1-202ENST00000409402 TSNQ15631 228 aaKnown RBP25.17■■□□□ 1.62
SPIRE1-202ENST00000409402 ZFP1Q6P2D0 407 aa25.17■■□□□ 1.62
SPIRE1-202ENST00000409402 SH3BP5LQ7L8J4 393 aa25.17■■□□□ 1.62
SPIRE1-202ENST00000409402 RECQL5O94762 991 aaPredicted RBP25.17■■□□□ 1.62
SPIRE1-202ENST00000409402 HTR7P34969 479 aa25.17■■□□□ 1.62
SPIRE1-202ENST00000409402 ERVK-21P61565 698 aa25.17■■□□□ 1.62
SPIRE1-202ENST00000409402 PTPN20Q4JDL3 420 aa25.17■■□□□ 1.62
SPIRE1-202ENST00000409402 C4orf32Q8N8J7 132 aa25.17■■□□□ 1.62
SPIRE1-202ENST00000409402 GPR156Q8NFN8 814 aa25.17■■□□□ 1.62
SPIRE1-202ENST00000409402 CD101Q93033 1021 aa25.17■■□□□ 1.62
SPIRE1-202ENST00000409402 SNX27Q96L92 541 aa25.17■■□□□ 1.62
SPIRE1-202ENST00000409402 C4BPAP04003 597 aaKnown RBP25.17■■□□□ 1.62
SPIRE1-202ENST00000409402 RHOQP17081 205 aa25.17■■□□□ 1.62
SPIRE1-202ENST00000409402 MARCKSL1P49006 195 aa25.17■■□□□ 1.62
SPIRE1-202ENST00000409402 SLC4A5Q9BY07 1137 aa25.17■■□□□ 1.62
SPIRE1-202ENST00000409402 MMADHCQ9H3L0 296 aaPredicted RBP25.17■■□□□ 1.62
SPIRE1-202ENST00000409402 ANGPT4Q9Y264 503 aa25.17■■□□□ 1.62
SPIRE1-202ENST00000409402 E7ENQ6 273 aa25.17■■□□□ 1.62
SPIRE1-202ENST00000409402 E9PAM4 449 aa25.17■■□□□ 1.62
SPIRE1-202ENST00000409402 RNASEH2AO75792 299 aaKnown RBP25.17■■□□□ 1.62
SPIRE1-202ENST00000409402 KRT75O95678 551 aa25.17■■□□□ 1.62
SPIRE1-202ENST00000409402 CTBP1Q13363 440 aa25.17■■□□□ 1.62
SPIRE1-202ENST00000409402 CLEC4DQ8WXI8 215 aa25.17■■□□□ 1.62
SPIRE1-202ENST00000409402 ARNTL2Q8WYA1 636 aa25.17■■□□□ 1.62
SPIRE1-202ENST00000409402 TTLL2Q9BWV7 592 aa25.17■■□□□ 1.62
SPIRE1-202ENST00000409402 FAM124BQ9H5Z6 455 aaPredicted RBP25.17■■□□□ 1.62
SPIRE1-202ENST00000409402 PCDH12Q9NPG4 1184 aa25.17■■□□□ 1.62
SPIRE1-202ENST00000409402 NDUFA13Q9P0J0 144 aa25.17■■□□□ 1.62
SPIRE1-202ENST00000409402 CHKBQ9Y259 395 aa25.17■■□□□ 1.62
SPIRE1-202ENST00000409402 GPAT3Q53EU6 434 aa25.16■■□□□ 1.62
SPIRE1-202ENST00000409402 IFNL1Q8IU54 200 aa25.16■■□□□ 1.62
SPIRE1-202ENST00000409402 ARMCX1Q9P291 453 aa25.16■■□□□ 1.62
SPIRE1-202ENST00000409402 GULP1Q9UBP9 304 aa25.16■■□□□ 1.62
SPIRE1-202ENST00000409402 MRPS33Q9Y291 106 aaKnown RBP25.16■■□□□ 1.62
SPIRE1-202ENST00000409402 PAPSS1O43252 624 aaPredicted RBP25.16■■□□□ 1.62
SPIRE1-202ENST00000409402 ITGA2BP08514 1039 aa25.16■■□□□ 1.62
SPIRE1-202ENST00000409402 RNF148Q8N7C7 305 aa25.16■■□□□ 1.62
SPIRE1-202ENST00000409402 PSMB9P28065 219 aa25.16■■□□□ 1.62
SPIRE1-202ENST00000409402 CDC73Q6P1J9 531 aa25.16■■□□□ 1.62
SPIRE1-202ENST00000409402 R3HCC1LQ7Z5L2 792 aaKnown RBP25.16■■□□□ 1.62
SPIRE1-202ENST00000409402 NELL1Q92832 810 aa25.16■■□□□ 1.62
SPIRE1-202ENST00000409402 TNFRSF25Q93038 417 aa25.16■■□□□ 1.62
SPIRE1-202ENST00000409402 SLITRK2Q9H156 845 aa25.16■■□□□ 1.62
SPIRE1-202ENST00000409402 FAM25AB3EWG3 89 aa25.16■■□□□ 1.62
SPIRE1-202ENST00000409402 FAM25CB3EWG5 89 aa25.16■■□□□ 1.62
SPIRE1-202ENST00000409402 FAM25GB3EWG6 89 aa25.16■■□□□ 1.62
SPIRE1-202ENST00000409402 UGT2B4P06133 528 aa25.16■■□□□ 1.62
SPIRE1-202ENST00000409402 GSSP48637 474 aa25.16■■□□□ 1.62
SPIRE1-202ENST00000409402 WASHC2DQ5SRD0 308 aa25.16■■□□□ 1.62
SPIRE1-202ENST00000409402 IRF2BP2Q7Z5L9 587 aa25.16■■□□□ 1.62
SPIRE1-202ENST00000409402 PIWIL2Q8TC59 973 aaKnown RBP25.16■■□□□ 1.62
SPIRE1-202ENST00000409402 MCRS1Q96EZ8 462 aa25.16■■□□□ 1.62
SPIRE1-202ENST00000409402 C11orf84Q9BUA3 381 aaPredicted RBP25.16■■□□□ 1.62
SPIRE1-202ENST00000409402 POLR1BQ9H9Y6 1135 aa25.16■■□□□ 1.62
SPIRE1-202ENST00000409402 GLYATL1P3A0A0U1RQE8 302 aa25.15■■□□□ 1.62
SPIRE1-202ENST00000409402 RPL38P63173 70 aaKnown RBP25.15■■□□□ 1.62
SPIRE1-202ENST00000409402 NEK10Q6ZWH5 1172 aa25.15■■□□□ 1.62
SPIRE1-202ENST00000409402 CDYL2Q8N8U2 506 aa25.15■■□□□ 1.62
SPIRE1-202ENST00000409402 ZNF398Q8TD17 642 aa25.15■■□□□ 1.62
SPIRE1-202ENST00000409402 ART4Q93070 314 aa25.15■■□□□ 1.62
SPIRE1-202ENST00000409402 ZFP14Q9HCL3 533 aa25.15■■□□□ 1.62
SPIRE1-202ENST00000409402 HLA-DQA2P01906 255 aa25.15■■□□□ 1.62
SPIRE1-202ENST00000409402 WASP42768 502 aa25.15■■□□□ 1.62
SPIRE1-202ENST00000409402 CXCR3P49682 368 aa25.15■■□□□ 1.62
SPIRE1-202ENST00000409402 ZC3H7AQ8IWR0 971 aaKnown RBP25.15■■□□□ 1.62
SPIRE1-202ENST00000409402 ASZ1Q8WWH4 475 aa25.15■■□□□ 1.62
SPIRE1-202ENST00000409402 TRMT13Q9NUP7 481 aaKnown RBP25.15■■□□□ 1.62
SPIRE1-202ENST00000409402 APTXQ7Z2E3 356 aaKnown RBP25.15■■□□□ 1.62
SPIRE1-202ENST00000409402 PRELID2Q8N945 189 aa25.15■■□□□ 1.62
SPIRE1-202ENST00000409402 OR6Y1Q8NGX8 325 aa25.15■■□□□ 1.62
SPIRE1-202ENST00000409402 C2orf15Q8WU43 125 aaKnown RBP25.15■■□□□ 1.62
SPIRE1-202ENST00000409402 FAM84AQ96KN4 292 aa25.15■■□□□ 1.62
SPIRE1-202ENST00000409402 STMN3Q9NZ72 180 aa25.15■■□□□ 1.62
SPIRE1-202ENST00000409402 VPS4AQ9UN37 437 aa25.15■■□□□ 1.62
SPIRE1-202ENST00000409402 FSCN2O14926 492 aa25.15■■□□□ 1.62
SPIRE1-202ENST00000409402 CRHR2Q13324 411 aa25.15■■□□□ 1.62
SPIRE1-202ENST00000409402 PARGQ86W56 976 aa25.15■■□□□ 1.62
SPIRE1-202ENST00000409402 KREMEN1Q96MU8 473 aa25.15■■□□□ 1.62
SPIRE1-202ENST00000409402 CPXM1Q96SM3 734 aa25.15■■□□□ 1.62
SPIRE1-202ENST00000409402 ERVW-1Q9UQF0 538 aa25.15■■□□□ 1.62
SPIRE1-202ENST00000409402 N6AMT1Q9Y5N5 214 aa25.15■■□□□ 1.62
SPIRE1-202ENST00000409402 MYBL2P10244 700 aa25.15■■□□□ 1.62
SPIRE1-202ENST00000409402 PIWIL4Q7Z3Z4 852 aaKnown RBP25.15■■□□□ 1.62
SPIRE1-202ENST00000409402 ZNF605Q86T29 641 aa25.15■■□□□ 1.62
SPIRE1-202ENST00000409402 ZDHHC13Q8IUH4 622 aa25.15■■□□□ 1.62
SPIRE1-202ENST00000409402 GPR135Q8IZ08 494 aa25.15■■□□□ 1.62
SPIRE1-202ENST00000409402 OR52K2Q8NGK3 314 aa25.15■■□□□ 1.62
SPIRE1-202ENST00000409402 C9orf16Q9BUW7 83 aa25.15■■□□□ 1.62
SPIRE1-202ENST00000409402 ZNF780BQ9Y6R6 833 aa25.15■■□□□ 1.62
SPIRE1-202ENST00000409402 H3BQF6 201 aa25.14■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms