RNA–Protein interactions for RNA: ENST00000409225.2

CHMP3-203, Transcript of charged multivesicular body protein 3, humanhuman

TSL 2 BASIC

Gene CHMP3, Length 1,099 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-203ENST00000409225 B4GALNT1Q00973 533 aa16.82■□□□□ 0.28
CHMP3-203ENST00000409225 RAD51Q06609 339 aa16.82■□□□□ 0.28
CHMP3-203ENST00000409225 TMEM52BQ4KMG9 183 aa16.82■□□□□ 0.28
CHMP3-203ENST00000409225 FAM102AQ5T9C2 384 aaPredicted RBP16.82■□□□□ 0.28
CHMP3-203ENST00000409225 RWDD4Q6NW29 188 aaKnown RBP16.82■□□□□ 0.28
CHMP3-203ENST00000409225 TRIM65Q6PJ69 517 aa16.82■□□□□ 0.28
CHMP3-203ENST00000409225 PIM3Q86V86 326 aa16.82■□□□□ 0.28
CHMP3-203ENST00000409225 NELFBQ8WX92 580 aa16.82■□□□□ 0.28
CHMP3-203ENST00000409225 OR1E3Q8WZA6 343 aa16.82■□□□□ 0.28
CHMP3-203ENST00000409225 GDAP1L1Q96MZ0 367 aa16.82■□□□□ 0.28
CHMP3-203ENST00000409225 TAAR9Q96RI9 348 aa16.82■□□□□ 0.28
CHMP3-203ENST00000409225 DPEP2Q9H4A9 486 aa16.82■□□□□ 0.28
CHMP3-203ENST00000409225 LRRC4CQ9HCJ2 640 aa16.82■□□□□ 0.28
CHMP3-203ENST00000409225 HPCAL4Q9UM19 191 aa16.82■□□□□ 0.28
CHMP3-203ENST00000409225 CTNND2Q9UQB3 1225 aa16.82■□□□□ 0.28
CHMP3-203ENST00000409225 UTP20O75691 2785 aaKnown RBP16.81■□□□□ 0.28
CHMP3-203ENST00000409225 CXorf51AA0A1B0GTR3 108 aa16.81■□□□□ 0.28
CHMP3-203ENST00000409225 CPNE6O95741 557 aa16.81■□□□□ 0.28
CHMP3-203ENST00000409225 SLC9A1P19634 815 aa16.81■□□□□ 0.28
CHMP3-203ENST00000409225 FLT3P36888 993 aa16.81■□□□□ 0.28
CHMP3-203ENST00000409225 OR1D5P58170 312 aa16.81■□□□□ 0.28
CHMP3-203ENST00000409225 PTK2Q05397 1052 aa16.81■□□□□ 0.28
CHMP3-203ENST00000409225 ELP6Q0PNE2 266 aa16.81■□□□□ 0.28
CHMP3-203ENST00000409225 SPECC1LQ69YQ0 1117 aa16.81■□□□□ 0.28
CHMP3-203ENST00000409225 ZNF354CQ86Y25 554 aa16.81■□□□□ 0.28
CHMP3-203ENST00000409225 IRF2BP1Q8IU81 584 aa16.81■□□□□ 0.28
CHMP3-203ENST00000409225 GPBAR1Q8TDU6 330 aa16.81■□□□□ 0.28
CHMP3-203ENST00000409225 SHC3Q92529 594 aa16.81■□□□□ 0.28
CHMP3-203ENST00000409225 NUDT22Q9BRQ3 303 aa16.81■□□□□ 0.28
CHMP3-203ENST00000409225 MRPL40Q9NQ50 206 aaKnown RBP16.81■□□□□ 0.28
CHMP3-203ENST00000409225 DGKBQ9Y6T7 804 aa16.81■□□□□ 0.28
CHMP3-203ENST00000409225 TMEM202A6NGA9 273 aa16.8■□□□□ 0.28
CHMP3-203ENST00000409225 ZNF891A8MT65 544 aaPredicted RBP16.8■□□□□ 0.28
CHMP3-203ENST00000409225 B4GAT1O43505 415 aa16.8■□□□□ 0.28
CHMP3-203ENST00000409225 BUB1O43683 1085 aa16.8■□□□□ 0.28
CHMP3-203ENST00000409225 NUDT21O43809 227 aaKnown RBP16.8■□□□□ 0.28
CHMP3-203ENST00000409225 TMCC1O94876 653 aa16.8■□□□□ 0.28
CHMP3-203ENST00000409225 GNA14O95837 355 aa16.8■□□□□ 0.28
CHMP3-203ENST00000409225 IGSF6O95976 241 aa16.8■□□□□ 0.28
CHMP3-203ENST00000409225 FGF3P11487 239 aaPredicted RBP16.8■□□□□ 0.28
CHMP3-203ENST00000409225 ALDH4A1P30038 563 aa16.8■□□□□ 0.28
CHMP3-203ENST00000409225 UGT1A3P35503 534 aa16.8■□□□□ 0.28
CHMP3-203ENST00000409225 MAPKAPK2P49137 400 aa16.8■□□□□ 0.28
CHMP3-203ENST00000409225 MAZP56270 477 aaKnown RBP16.8■□□□□ 0.28
CHMP3-203ENST00000409225 STX17P56962 302 aa16.8■□□□□ 0.28
CHMP3-203ENST00000409225 FOXR2Q6PJQ5 311 aa16.8■□□□□ 0.28
CHMP3-203ENST00000409225 CACNA2D3Q8IZS8 1091 aa16.8■□□□□ 0.28
CHMP3-203ENST00000409225 PLA2G15Q8NCC3 412 aa16.8■□□□□ 0.28
CHMP3-203ENST00000409225 OR56A4Q8NGH8 313 aa16.8■□□□□ 0.28
CHMP3-203ENST00000409225 CCL4L1Q8NHW4 92 aa16.8■□□□□ 0.28
CHMP3-203ENST00000409225 FAM81BQ96LP2 452 aa16.8■□□□□ 0.28
CHMP3-203ENST00000409225 CCDC74BQ96LY2 380 aa16.8■□□□□ 0.28
CHMP3-203ENST00000409225 CFAP57Q96MR6 1250 aa16.8■□□□□ 0.28
CHMP3-203ENST00000409225 CATSPER2Q96P56 530 aa16.8■□□□□ 0.28
CHMP3-203ENST00000409225 TTYH3Q9C0H2 523 aa16.8■□□□□ 0.28
CHMP3-203ENST00000409225 TMEM168Q9H0V1 697 aa16.8■□□□□ 0.28
CHMP3-203ENST00000409225 FGF22Q9HCT0 170 aa16.8■□□□□ 0.28
CHMP3-203ENST00000409225 TMEM51Q9NW97 253 aa16.8■□□□□ 0.28
CHMP3-203ENST00000409225 DKK3Q9UBP4 350 aa16.8■□□□□ 0.28
CHMP3-203ENST00000409225 MAN1B1Q9UKM7 699 aa16.8■□□□□ 0.28
CHMP3-203ENST00000409225 IGHV5-10-1A0A0J9YXX1 117 aa16.79■□□□□ 0.28
CHMP3-203ENST00000409225 BICDL2A1A5D9 508 aa16.79■□□□□ 0.28
CHMP3-203ENST00000409225 GOLGA8SH3BPF8 625 aa16.79■□□□□ 0.28
CHMP3-203ENST00000409225 HGSO14964 777 aaPredicted RBP16.79■□□□□ 0.28
CHMP3-203ENST00000409225 INSIG1O15503 277 aa16.79■□□□□ 0.28
CHMP3-203ENST00000409225 PIGNO95427 931 aa16.79■□□□□ 0.28
CHMP3-203ENST00000409225 PRKAR1AP10644 381 aa16.79■□□□□ 0.28
CHMP3-203ENST00000409225 PPP1R2P41236 205 aa16.79■□□□□ 0.28
CHMP3-203ENST00000409225 MARSP56192 900 aaKnown RBP16.79■□□□□ 0.28
CHMP3-203ENST00000409225 RHOAP61586 193 aa16.79■□□□□ 0.28
CHMP3-203ENST00000409225 MTM1Q13496 603 aa16.79■□□□□ 0.28
CHMP3-203ENST00000409225 TRNP1Q6NT89 227 aa16.79■□□□□ 0.28
CHMP3-203ENST00000409225 SLC47A2Q86VL8 602 aa16.79■□□□□ 0.28
CHMP3-203ENST00000409225 NLRP14Q86W24 1093 aa16.79■□□□□ 0.28
CHMP3-203ENST00000409225 ART4Q93070 314 aa16.79■□□□□ 0.28
CHMP3-203ENST00000409225 HMCESQ96FZ2 354 aa16.79■□□□□ 0.28
CHMP3-203ENST00000409225 NCAPGQ9BPX3 1015 aa16.79■□□□□ 0.28
CHMP3-203ENST00000409225 CDH19Q9H159 772 aa16.79■□□□□ 0.28
CHMP3-203ENST00000409225 MAGEH1Q9H213 219 aa16.79■□□□□ 0.28
CHMP3-203ENST00000409225 PCDH12Q9NPG4 1184 aa16.79■□□□□ 0.28
CHMP3-203ENST00000409225 APEX2Q9UBZ4 518 aa16.79■□□□□ 0.28
CHMP3-203ENST00000409225 OR12D3Q9UGF7 316 aa16.79■□□□□ 0.28
CHMP3-203ENST00000409225 MOSPD1Q9UJG1 213 aa16.79■□□□□ 0.28
CHMP3-203ENST00000409225 DAAM1Q9Y4D1 1078 aa16.79■□□□□ 0.28
CHMP3-203ENST00000409225 PCDHGA3Q9Y5H0 932 aa16.79■□□□□ 0.28
CHMP3-203ENST00000409225 B3GALT1Q9Y5Z6 326 aa16.79■□□□□ 0.28
CHMP3-203ENST00000409225 ANKRD36A6QL64 1941 aa16.78■□□□□ 0.28
CHMP3-203ENST00000409225 RHPN2P1A8MT19 583 aa16.78■□□□□ 0.28
CHMP3-203ENST00000409225 PPP1R3GB7ZBB8 358 aa16.78■□□□□ 0.28
CHMP3-203ENST00000409225 CACNB4O00305 520 aaPredicted RBP16.78■□□□□ 0.28
CHMP3-203ENST00000409225 NKX2-8O15522 239 aa16.78■□□□□ 0.28
CHMP3-203ENST00000409225 KDELR3O43731 214 aa16.78■□□□□ 0.28
CHMP3-203ENST00000409225 DUX1O43812 170 aa16.78■□□□□ 0.28
CHMP3-203ENST00000409225 RAD1O60671 282 aa16.78■□□□□ 0.28
CHMP3-203ENST00000409225 RAMP2O60895 175 aa16.78■□□□□ 0.28
CHMP3-203ENST00000409225 PNMA6AP0CW24 399 aaPredicted RBP16.78■□□□□ 0.28
CHMP3-203ENST00000409225 RHOQP17081 205 aa16.78■□□□□ 0.28
CHMP3-203ENST00000409225 LIG3P49916 1009 aa16.78■□□□□ 0.28
CHMP3-203ENST00000409225 KIAA1024LP59773 190 aa16.78■□□□□ 0.28
CHMP3-203ENST00000409225 RAB6CQ53S08 254 aa16.78■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms