RNA–Protein interactions for RNA: ENST00000409025.5

USP39-202, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 5 BASIC

Gene USP39, Length 1,946 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-202ENST00000409025 CES4AQ5XG92 561 aa19.07■□□□□ 0.64
USP39-202ENST00000409025 ZCCHC23Q6ZST2 131 aa19.07■□□□□ 0.64
USP39-202ENST00000409025 C10orf107Q8IVU9 208 aa19.07■□□□□ 0.64
USP39-202ENST00000409025 WFDC5Q8TCV5 224 aa19.07■□□□□ 0.64
USP39-202ENST00000409025 STYXQ8WUJ0 223 aa19.07■□□□□ 0.64
USP39-202ENST00000409025 ALG14Q96F25 216 aa19.07■□□□□ 0.64
USP39-202ENST00000409025 HCFC1R1Q9NWW0 138 aa19.07■□□□□ 0.64
USP39-202ENST00000409025 ARHGAP26Q9UNA1 814 aa19.07■□□□□ 0.64
USP39-202ENST00000409025 ACOT9Q9Y305 439 aa19.07■□□□□ 0.64
USP39-202ENST00000409025 RAI2Q9Y5P3 530 aa19.07■□□□□ 0.64
USP39-202ENST00000409025 HGSO14964 777 aaPredicted RBP19.06■□□□□ 0.64
USP39-202ENST00000409025 RPP40O75818 363 aaKnown RBP19.06■□□□□ 0.64
USP39-202ENST00000409025 SERPINE1P05121 402 aa19.06■□□□□ 0.64
USP39-202ENST00000409025 PIRTP0C851 137 aa19.06■□□□□ 0.64
USP39-202ENST00000409025 SLC35E2BP0CK96 405 aa19.06■□□□□ 0.64
USP39-202ENST00000409025 SYN1P17600 705 aa19.06■□□□□ 0.64
USP39-202ENST00000409025 PTPN2P17706 415 aa19.06■□□□□ 0.64
USP39-202ENST00000409025 GRK2P25098 689 aa19.06■□□□□ 0.64
USP39-202ENST00000409025 DDX6P26196 483 aaKnown RBP eCLIP19.06■□□□□ 0.645e-6■■■■■ 34.8
USP39-202ENST00000409025 CLCN5P51795 746 aa19.06■□□□□ 0.64
USP39-202ENST00000409025 RHOAP61586 193 aa19.06■□□□□ 0.64
USP39-202ENST00000409025 GPR158Q5T848 1215 aa19.06■□□□□ 0.64
USP39-202ENST00000409025 CNSTQ6PJW8 725 aa19.06■□□□□ 0.64
USP39-202ENST00000409025 CILP2Q8IUL8 1156 aa19.06■□□□□ 0.64
USP39-202ENST00000409025 MFSD6LQ8IWD5 586 aa19.06■□□□□ 0.64
USP39-202ENST00000409025 MICALL1Q8N3F8 863 aa19.06■□□□□ 0.64
USP39-202ENST00000409025 SREK1Q8WXA9 508 aaKnown RBP19.06■□□□□ 0.64
USP39-202ENST00000409025 PPM1EQ8WY54 764 aa19.06■□□□□ 0.64
USP39-202ENST00000409025 DNAJC1Q96KC8 554 aaKnown RBP19.06■□□□□ 0.64
USP39-202ENST00000409025 TBATAQ96M53 351 aa19.06■□□□□ 0.64
USP39-202ENST00000409025 C17orf80Q9BSJ5 609 aa19.06■□□□□ 0.64
USP39-202ENST00000409025 C2orf49Q9BVC5 232 aaPredicted RBP19.06■□□□□ 0.64
USP39-202ENST00000409025 TASP1Q9H6P5 420 aa19.06■□□□□ 0.64
USP39-202ENST00000409025 MAN1C1Q9NR34 630 aa19.06■□□□□ 0.64
USP39-202ENST00000409025 LHX3Q9UBR4 397 aa19.06■□□□□ 0.64
USP39-202ENST00000409025 CCL22O00626 93 aa19.06■□□□□ 0.64
USP39-202ENST00000409025 DLDP09622 509 aaKnown RBP19.06■□□□□ 0.64
USP39-202ENST00000409025 CCR2P41597 374 aa19.06■□□□□ 0.64
USP39-202ENST00000409025 EPHA5P54756 1037 aa19.06■□□□□ 0.64
USP39-202ENST00000409025 BNIP1Q12981 228 aa19.06■□□□□ 0.64
USP39-202ENST00000409025 RETSATQ6NUM9 610 aa19.06■□□□□ 0.64
USP39-202ENST00000409025 NCEH1Q6PIU2 408 aa19.06■□□□□ 0.64
USP39-202ENST00000409025 TPGS1Q6ZTW0 290 aa19.06■□□□□ 0.64
USP39-202ENST00000409025 TNS4Q8IZW8 715 aa19.06■□□□□ 0.64
USP39-202ENST00000409025 SHKBP1Q8TBC3 707 aa19.06■□□□□ 0.64
USP39-202ENST00000409025 C1QTNF1Q9BXJ1 281 aa19.06■□□□□ 0.64
USP39-202ENST00000409025 ADGRE3Q9BY15 652 aa19.06■□□□□ 0.64
USP39-202ENST00000409025 MYLK2Q9H1R3 596 aa19.06■□□□□ 0.64
USP39-202ENST00000409025 DNMT3BQ9UBC3 853 aaKnown RBP19.06■□□□□ 0.64
USP39-202ENST00000409025 PCDHGC4Q9Y5F7 938 aa19.06■□□□□ 0.64
USP39-202ENST00000409025 A0A087X1B8 175 aa19.05■□□□□ 0.64
USP39-202ENST00000409025 H0YHG0 523 aa19.05■□□□□ 0.64
USP39-202ENST00000409025 GLP2RO95838 553 aa19.05■□□□□ 0.64
USP39-202ENST00000409025 PRLP01236 227 aa19.05■□□□□ 0.64
USP39-202ENST00000409025 CYBBP04839 570 aa19.05■□□□□ 0.64
USP39-202ENST00000409025 RALBP11234 206 aa19.05■□□□□ 0.64
USP39-202ENST00000409025 ILF2Q12905 390 aaKnown RBP19.05■□□□□ 0.64
USP39-202ENST00000409025 ARHGAP15Q53QZ3 475 aa19.05■□□□□ 0.64
USP39-202ENST00000409025 RALGPS1Q5JS13 557 aa19.05■□□□□ 0.64
USP39-202ENST00000409025 CEP97Q8IW35 865 aa19.05■□□□□ 0.64
USP39-202ENST00000409025 LPCAT1Q8NF37 534 aa19.05■□□□□ 0.64
USP39-202ENST00000409025 RDH11Q8TC12 318 aa19.05■□□□□ 0.64
USP39-202ENST00000409025 SH3RF2Q8TEC5 729 aa19.05■□□□□ 0.64
USP39-202ENST00000409025 ERP27Q96DN0 273 aa19.05■□□□□ 0.64
USP39-202ENST00000409025 TMEM120AQ9BXJ8 343 aa19.05■□□□□ 0.64
USP39-202ENST00000409025 SMG9Q9H0W8 520 aaKnown RBP19.05■□□□□ 0.64
USP39-202ENST00000409025 KCNK13Q9HB14 408 aa19.05■□□□□ 0.64
USP39-202ENST00000409025 KIAA1522Q9P206 1035 aaPredicted RBP19.05■□□□□ 0.64
USP39-202ENST00000409025 RUVBL2Q9Y230 463 aaKnown RBP19.05■□□□□ 0.64
USP39-202ENST00000409025 FCF1Q9Y324 198 aaKnown RBP19.05■□□□□ 0.64
USP39-202ENST00000409025 HELZP42694 1942 aaKnown RBP19.04■□□□□ 0.64
USP39-202ENST00000409025 AURKAO14965 403 aa19.04■□□□□ 0.64
USP39-202ENST00000409025 BUD23O43709 281 aaKnown RBP19.04■□□□□ 0.64
USP39-202ENST00000409025 RFPL2O75678 378 aa19.04■□□□□ 0.64
USP39-202ENST00000409025 DNAJC8O75937 253 aaPredicted RBP19.04■□□□□ 0.64
USP39-202ENST00000409025 GOT2P00505 430 aaKnown RBP19.04■□□□□ 0.64
USP39-202ENST00000409025 SLC1A6P48664 564 aa19.04■□□□□ 0.64
USP39-202ENST00000409025 TAS2R39P59534 338 aa19.04■□□□□ 0.64
USP39-202ENST00000409025 TAF1AQ15573 450 aaPredicted RBP19.04■□□□□ 0.64
USP39-202ENST00000409025 ZNF789Q5FWF6 425 aa19.04■□□□□ 0.64
USP39-202ENST00000409025 GLT6D1Q7Z4J2 308 aa19.04■□□□□ 0.64
USP39-202ENST00000409025 ARID3BQ8IVW6 561 aaPredicted RBP19.04■□□□□ 0.64
USP39-202ENST00000409025 APCDD1Q8J025 514 aa19.04■□□□□ 0.64
USP39-202ENST00000409025 OR13C4Q8NGS5 318 aa19.04■□□□□ 0.64
USP39-202ENST00000409025 KCTD4Q8WVF5 259 aa19.04■□□□□ 0.64
USP39-202ENST00000409025 ACDQ96AP0 544 aa19.04■□□□□ 0.64
USP39-202ENST00000409025 TSPAN17Q96FV3 270 aa19.04■□□□□ 0.64
USP39-202ENST00000409025 SCYL1Q96KG9 808 aa19.04■□□□□ 0.64
USP39-202ENST00000409025 OMDQ99983 421 aa19.04■□□□□ 0.64
USP39-202ENST00000409025 MCOLN1Q9GZU1 580 aa19.04■□□□□ 0.64
USP39-202ENST00000409025 ZNF395Q9H8N7 513 aaPredicted RBP19.04■□□□□ 0.64
USP39-202ENST00000409025 PLK2Q9NYY3 685 aa19.04■□□□□ 0.64
USP39-202ENST00000409025 SPO11Q9Y5K1 396 aa19.04■□□□□ 0.64
USP39-202ENST00000409025 OR51F1A6NGY5 319 aa19.04■□□□□ 0.64
USP39-202ENST00000409025 C2orf81A6NN90 581 aa19.04■□□□□ 0.64
USP39-202ENST00000409025 C5orf67F2Z3F1 127 aa19.04■□□□□ 0.64
USP39-202ENST00000409025 G3V2L1 256 aa19.04■□□□□ 0.64
USP39-202ENST00000409025 CD3EAPO15446 510 aaKnown RBP19.04■□□□□ 0.64
USP39-202ENST00000409025 PDHA1P08559 390 aa19.04■□□□□ 0.64
USP39-202ENST00000409025 PTPRCAPQ14761 206 aa19.04■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms