RNA–Protein interactions for RNA: ENST00000407019.6

NUP50-203, Transcript of nucleoporin 50, humanhuman

TSL 1 (best) BASIC

Gene NUP50, Length 2,059 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-203ENST00000407019 RPRD1AQ96P16 312 aaPredicted RBP16.94■□□□□ 0.3
NUP50-203ENST00000407019 CYP4F12Q9HCS2 524 aa16.94■□□□□ 0.3
NUP50-203ENST00000407019 TLR8Q9NR97 1041 aaKnown RBP16.94■□□□□ 0.3
NUP50-203ENST00000407019 COPG1Q9Y678 874 aaKnown RBP16.94■□□□□ 0.3
NUP50-203ENST00000407019 SLC12A8A0AV02 714 aa16.93■□□□□ 0.3
NUP50-203ENST00000407019 TTC24A2A3L6 582 aaPredicted RBP16.93■□□□□ 0.3
NUP50-203ENST00000407019 TMEM88BA6NKF7 163 aa16.93■□□□□ 0.3
NUP50-203ENST00000407019 OR6C75A6NL08 312 aa16.93■□□□□ 0.3
NUP50-203ENST00000407019 DRGXA6NNA5 263 aa16.93■□□□□ 0.3
NUP50-203ENST00000407019 A8MT66 165 aa16.93■□□□□ 0.3
NUP50-203ENST00000407019 IPO13O94829 963 aaKnown RBP16.93■□□□□ 0.3
NUP50-203ENST00000407019 RTN3O95197 1032 aaPredicted RBP16.93■□□□□ 0.3
NUP50-203ENST00000407019 CCDC166P0CW27 439 aa16.93■□□□□ 0.3
NUP50-203ENST00000407019 ETFBP38117 255 aa16.93■□□□□ 0.3
NUP50-203ENST00000407019 SULT2A1Q06520 285 aa16.93■□□□□ 0.3
NUP50-203ENST00000407019 ACAP2Q15057 778 aa16.93■□□□□ 0.3
NUP50-203ENST00000407019 PARP15Q460N3 678 aa16.93■□□□□ 0.3
NUP50-203ENST00000407019 KBTBD6Q86V97 674 aa16.93■□□□□ 0.3
NUP50-203ENST00000407019 HDAC10Q969S8 669 aa16.93■□□□□ 0.3
NUP50-203ENST00000407019 ZIC5Q96T25 663 aa16.93■□□□□ 0.3
NUP50-203ENST00000407019 XRN2Q9H0D6 950 aaKnown RBP eCLIP16.93■□□□□ 0.31e-8■■■■■ 27
NUP50-203ENST00000407019 EML4Q9HC35 981 aaKnown RBP16.93■□□□□ 0.3
NUP50-203ENST00000407019 ADAMTS6Q9UKP5 1117 aa16.93■□□□□ 0.3
NUP50-203ENST00000407019 VWA7Q9Y334 891 aa16.93■□□□□ 0.3
NUP50-203ENST00000407019 MIA3Q5JRA6 1907 aa16.93■□□□□ 0.3
NUP50-203ENST00000407019 THSD7BQ9C0I4 1608 aa16.93■□□□□ 0.3
NUP50-203ENST00000407019 SOAT2O75908 522 aa16.93■□□□□ 0.3
NUP50-203ENST00000407019 ATXN1LP0C7T5 689 aaKnown RBP16.93■□□□□ 0.3
NUP50-203ENST00000407019 HNRNPLP14866 589 aaKnown RBP eCLIP16.93■□□□□ 0.3
NUP50-203ENST00000407019 KCNA5P22460 613 aa16.93■□□□□ 0.3
NUP50-203ENST00000407019 ARSDP51689 593 aa16.93■□□□□ 0.3
NUP50-203ENST00000407019 ARPP19P56211 112 aa16.93■□□□□ 0.3
NUP50-203ENST00000407019 TAF10Q12962 218 aa16.93■□□□□ 0.3
NUP50-203ENST00000407019 SERINC3Q13530 473 aa16.93■□□□□ 0.3
NUP50-203ENST00000407019 FAM171A1Q5VUB5 890 aa16.93■□□□□ 0.3
NUP50-203ENST00000407019 CIR1Q86X95 450 aaPredicted RBP16.93■□□□□ 0.3
NUP50-203ENST00000407019 PDSS2Q86YH6 399 aa16.93■□□□□ 0.3
NUP50-203ENST00000407019 PGAM4Q8N0Y7 254 aa16.93■□□□□ 0.3
NUP50-203ENST00000407019 CEP70Q8NHQ1 597 aa16.93■□□□□ 0.3
NUP50-203ENST00000407019 ZDHHC7Q9NXF8 308 aa16.93■□□□□ 0.3
NUP50-203ENST00000407019 VPS28Q9UK41 221 aa16.93■□□□□ 0.3
NUP50-203ENST00000407019 LOC285095A0A1B0GVY8 99 aa16.92■□□□□ 0.3
NUP50-203ENST00000407019 H3BNX3 289 aa16.92■□□□□ 0.3
NUP50-203ENST00000407019 IGLV3-27P01718 113 aa16.92■□□□□ 0.3
NUP50-203ENST00000407019 MRPL58Q14197 206 aaKnown RBP16.92■□□□□ 0.3
NUP50-203ENST00000407019 ACBD5Q5T8D3 534 aaPredicted RBP16.92■□□□□ 0.3
NUP50-203ENST00000407019 LPCAT4Q643R3 524 aa16.92■□□□□ 0.3
NUP50-203ENST00000407019 SLC22A9Q8IVM8 553 aa16.92■□□□□ 0.3
NUP50-203ENST00000407019 GDPD5Q8WTR4 605 aa16.92■□□□□ 0.3
NUP50-203ENST00000407019 PPP2R3CQ969Q6 453 aa16.92■□□□□ 0.3
NUP50-203ENST00000407019 UBXN10Q96LJ8 280 aa16.92■□□□□ 0.3
NUP50-203ENST00000407019 KLHL4Q9C0H6 718 aa16.92■□□□□ 0.3
NUP50-203ENST00000407019 DOCK4Q8N1I0 1966 aa16.92■□□□□ 0.3
NUP50-203ENST00000407019 CENPFP49454 3210 aa16.92■□□□□ 0.3
NUP50-203ENST00000407019 CCL22O00626 93 aa16.92■□□□□ 0.3
NUP50-203ENST00000407019 LDB2O43679 373 aa16.92■□□□□ 0.3
NUP50-203ENST00000407019 S1PR4O95977 384 aa16.92■□□□□ 0.3
NUP50-203ENST00000407019 MAPKAPK2P49137 400 aa16.92■□□□□ 0.3
NUP50-203ENST00000407019 YBEYP58557 167 aaPredicted RBP16.92■□□□□ 0.3
NUP50-203ENST00000407019 XIAPP98170 497 aa16.92■□□□□ 0.3
NUP50-203ENST00000407019 ART3Q13508 389 aa16.92■□□□□ 0.3
NUP50-203ENST00000407019 MGAT5BQ3V5L5 792 aa16.92■□□□□ 0.3
NUP50-203ENST00000407019 RASIP1Q5U651 963 aa16.92■□□□□ 0.3
NUP50-203ENST00000407019 FAM45BPQ6NSW5 357 aa16.92■□□□□ 0.3
NUP50-203ENST00000407019 SDCCAG8Q86SQ7 713 aaPredicted RBP16.92■□□□□ 0.3
NUP50-203ENST00000407019 LDB1Q86U70 411 aaPredicted RBP16.92■□□□□ 0.3
NUP50-203ENST00000407019 SPNS2Q8IVW8 549 aa16.92■□□□□ 0.3
NUP50-203ENST00000407019 PELI3Q8N2H9 469 aa16.92■□□□□ 0.3
NUP50-203ENST00000407019 FAM45AQ8TCE6 357 aa16.92■□□□□ 0.3
NUP50-203ENST00000407019 ANKRD49Q8WVL7 239 aa16.92■□□□□ 0.3
NUP50-203ENST00000407019 IFT43Q96FT9 208 aa16.92■□□□□ 0.3
NUP50-203ENST00000407019 CDRT15Q96T59 188 aa16.92■□□□□ 0.3
NUP50-203ENST00000407019 SEMA3CQ99985 751 aa16.92■□□□□ 0.3
NUP50-203ENST00000407019 POLR1EQ9GZS1 481 aaKnown RBP16.92■□□□□ 0.3
NUP50-203ENST00000407019 EFCAB1Q9HAE3 211 aa16.92■□□□□ 0.3
NUP50-203ENST00000407019 MARCH4Q9P2E8 410 aaPredicted RBP16.92■□□□□ 0.3
NUP50-203ENST00000407019 PACSIN3Q9UKS6 424 aa16.92■□□□□ 0.3
NUP50-203ENST00000407019 FIS1Q9Y3D6 152 aa16.92■□□□□ 0.3
NUP50-203ENST00000407019 UPP2O95045 317 aa16.91■□□□□ 0.3
NUP50-203ENST00000407019 WISP3O95389 354 aaPredicted RBP16.91■□□□□ 0.3
NUP50-203ENST00000407019 ENO3P13929 434 aaPredicted RBP16.91■□□□□ 0.3
NUP50-203ENST00000407019 PEX2P28328 305 aa16.91■□□□□ 0.3
NUP50-203ENST00000407019 OR1E1P30953 314 aa16.91■□□□□ 0.3
NUP50-203ENST00000407019 ACVRL1P37023 503 aa16.91■□□□□ 0.3
NUP50-203ENST00000407019 PBX3P40426 434 aa16.91■□□□□ 0.3
NUP50-203ENST00000407019 SLC26A3P40879 764 aa16.91■□□□□ 0.3
NUP50-203ENST00000407019 THOP1P52888 689 aa16.91■□□□□ 0.3
NUP50-203ENST00000407019 CDKN2DP55273 166 aa16.91■□□□□ 0.3
NUP50-203ENST00000407019 RING1Q06587 406 aa16.91■□□□□ 0.3
NUP50-203ENST00000407019 ILF2Q12905 390 aaKnown RBP16.91■□□□□ 0.3
NUP50-203ENST00000407019 LRRC36Q1X8D7 754 aa16.91■□□□□ 0.3
NUP50-203ENST00000407019 ZNF423Q2M1K9 1284 aa16.91■□□□□ 0.3
NUP50-203ENST00000407019 PIGGQ5H8A4 983 aa16.91■□□□□ 0.3
NUP50-203ENST00000407019 CUZD1Q86UP6 607 aa16.91■□□□□ 0.3
NUP50-203ENST00000407019 PNPLA1Q8N8W4 532 aa16.91■□□□□ 0.3
NUP50-203ENST00000407019 FEM1CQ96JP0 617 aa16.91■□□□□ 0.3
NUP50-203ENST00000407019 GLT1D1Q96MS3 346 aa16.91■□□□□ 0.3
NUP50-203ENST00000407019 SEPT5Q99719 369 aaPredicted RBP16.91■□□□□ 0.3
NUP50-203ENST00000407019 SUDS3Q9H7L9 328 aaPredicted RBP16.91■□□□□ 0.3
NUP50-203ENST00000407019 WDR41Q9HAD4 459 aa16.91■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms